FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003624692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003624692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACAC53.1055900621118013No Hit
ATCACCCTCTACGGGAGAACCAAGGAGCTGACTTCGGAACTAAAGGAGAA21.2422360248447204No Hit
CTTTTTAAAAGATCGCCTTCAAATTATTTTAATCACCTACAACTTTTAAA21.2422360248447204No Hit
GGCTGGAGCAGTTGGGGATCTTCAGCTTCTAAATGCTAATTACACAGTGA21.2422360248447204No Hit
GGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGAAACCTCACCCGGCC21.2422360248447204No Hit
GGTTCAAGCTATTCTCGTGTCTCAGCCTCCCAAGTAGCTGGGATCACAGG21.2422360248447204No Hit
CTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCC21.2422360248447204No Hit
GTGCAGCTCAGAGCCCTGTGGCGGACTACAGGGCCTGCACAGACGGTCAC21.2422360248447204No Hit
CTGTTAGTTGAGGACACACATCACAAATAAGTTTCTGAGAATGCTTCTGT21.2422360248447204No Hit
TCGCGGAACAGCACCCCTTGGGTCGCGCCGCGCCCGGTGGCGACCATGAT21.2422360248447204No Hit
CCGAGCCACCATTCTGGCTCCAAGGCTGCATCTCTCCACTGGACTAGCGA21.2422360248447204No Hit
ACCCCAAACCCAACAAGGAGGAAGCCTGGGAAGTGCCCAGTGACTTATGG21.2422360248447204No Hit
GGACCTGTGTGGCTGGGCGTCCAGTGAGGGTCGTCAGCAGGGTCCAGCCC21.2422360248447204No Hit
GCTTAATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTC21.2422360248447204No Hit
TTACACAGTGAGCTTTGGGCTATTTTTTCCATGAGCTTAATGATGCTTTC21.2422360248447204No Hit
GAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTGGATCCTGTTG21.2422360248447204No Hit
ATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAG21.2422360248447204No Hit
TTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGG21.2422360248447204No Hit
CACGTACACGATGCCGGCACCTTGCAGCTCTCGCACGATGGCCTCCAAGC21.2422360248447204No Hit
TGGACACACCCTCCAGTTATGAGGCTGCCATGGAACTTTTCAGCCCTGAT21.2422360248447204No Hit
GTTATGAGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAG21.2422360248447204No Hit
ACGCAGGAACGGGGAGTTTGGGAGAAGCTCTCCTGGTGTTGACTTAGGGA10.6211180124223602No Hit
GTACTCAGATGCCCCCGTAGGTGCAAAAGCAACATCCACATCTCACTCCT10.6211180124223602No Hit
GGTGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACGGTAACGCAGGTG10.6211180124223602No Hit
ACCCTGGTCACACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAGATCTG10.6211180124223602No Hit
AAGCATGGCAGCGGCAGAGGCTGGAGCAGTTGGGGATCTTCAGCTTCTAA10.6211180124223602No Hit
ACGTGGGATCGTTTCCAGATGAGAATTCACAAGCGACTCATTGACTTGCA10.6211180124223602No Hit
CCCTGCGAAGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTAC10.6211180124223602No Hit
TAATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTCTTC10.6211180124223602No Hit
GACTTAGAGGCGTTCAGTCATAATCCCACAGATGGTAGCTTCGCCCCATT10.6211180124223602No Hit
ATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAG10.6211180124223602No Hit
CATTTTCACATCATCGCCAAGTTCTAAAGAGTCAACCTCTTTAGTCCCTT10.6211180124223602No Hit
GTTGTGGGAAGAAAGTTAGATTTACGCCGATGAATATGATAGTGAAATGG10.6211180124223602No Hit
TTTTCCATGAGCTTAATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGTC10.6211180124223602No Hit
GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG10.6211180124223602No Hit
GGCATAGATTTGGCTGTCTCCGCTCATAGCTGCTTTTGGCGCGAAAGATG10.6211180124223602No Hit
AAACTGTGATATGCAAAAAACAAAGGCAGAAGGTAGTCATAAAGAAATTT10.6211180124223602No Hit
AAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTAT10.6211180124223602No Hit
TCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAGCTGAGCCCC10.6211180124223602No Hit
TGCTTTCTCTGGGCTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAGCTGA10.6211180124223602No Hit
GGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGAGCAGT10.6211180124223602No Hit
TCCTGGCTCACTACAACCTCTGCCTTCCAGGTTCAAGTGTTTCTCCCGCC10.6211180124223602No Hit
TGTCAGGACAACATCTCTTCTTCCCTGGACACTGCCAGTCACTCCTGTCT10.6211180124223602No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG10.6211180124223602No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA10.6211180124223602No Hit
GCCAGTGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAATCC10.6211180124223602No Hit
TTATGAGGCTGCCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAGG10.6211180124223602No Hit
TATATAAAACCAGCTAATGTGTTCATTACAGCCACTGGGGTGGTAAAACT10.6211180124223602No Hit
AGATACAAGAAACCTGAGTGCCAGAGTGACTGGCAGTGTCCAGGGAAGAA10.6211180124223602No Hit
GGAGAAATGGTGAAGACAACGACAAAAGCAGCAAACCTAAAAGTTTCAGC10.6211180124223602No Hit
AGGAACGACATGATCCCGAGGAACAGCACCACCACCGGCAGCACCGGCAG10.6211180124223602No Hit
GTCCTGACACTTGTGGCATCAAATGCCTGGATCCTGTTGACACCCCAAAC10.6211180124223602No Hit
ACGCAGAGTACATGGGATACTAGCCCACCAGACTCAGAGACGGAACCAGA10.6211180124223602No Hit
GATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATG10.6211180124223602No Hit
CACCAGGGCCTCCAAACTTTTTGGACTCGCAGCGACGAGGGTCAGCTACC10.6211180124223602No Hit
AAATGCTAATTACACAGTGAGCTTTGGGCTATTTTTTCCATGAGCTTAAT10.6211180124223602No Hit
AGAATACACCATCAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGA10.6211180124223602No Hit
GGCTCTAGATCATTCAATACCATAGGCCCAAAGCCTTTCTGACTTTCTGC10.6211180124223602No Hit
CTATTTTTTGTTGTATCCATTATCCTTCCCATTCTCTGGCAACCGTTCTT10.6211180124223602No Hit
GCCGAACAGCGGGGGCAGCGTGCTGACGCGGAAGTCGATCGGCGTGTGGC10.6211180124223602No Hit
CTCCCTCATGTCTTGATCAGGGCTGAAAAGTTCCATGGCAGCCTCATAAC10.6211180124223602No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCC10.6211180124223602No Hit
ACCAGAGACAGGCCAGAGCATCCCCCTCCTCCACCATGAAACTCGCTGTC10.6211180124223602No Hit
TTTTTCCATGAGCTTAATGATGCTTTCTCTGGGCTTTTGGGGGAGGGTGT10.6211180124223602No Hit
GAGTTGTATGAATGTCCCTTATCTTGTTAAATTTGTGACTTTAGATGGCA10.6211180124223602No Hit
GAGGGAGGCAGGGGCTCAGCTGAAGAAGCTGGTGGACACCCTCCCCCAAA10.6211180124223602No Hit
ACCTCCTCCTTCGAGCCCGAGCCGAACTCCTCGTCGTCGATGGACAAGAT10.6211180124223602No Hit
GGAGTATTAATGTTAAACCCTGAACTACTAATGAGAGGCGACGACCAAAA10.6211180124223602No Hit
GTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCCTCATGTCTTGATC10.6211180124223602No Hit
GCCCGCTACCTACGGGCGGCTGCAGGAGGAGCGGCGGCACCGTAGGGAGA10.6211180124223602No Hit
GCCAGAGCAAGCGTGACTTGAAGTGTTGCATGGGCATGTGTGGGAAAACC10.6211180124223602No Hit
CCGGACATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGC10.6211180124223602No Hit
CAGTGGTGGAGCCAAGTCTCAGGGTGGAAAGGACCTGGACCACACAGAGC10.6211180124223602No Hit
GTCATCGAAACCCTCCTCATGGACACACCCTCCAGTTATGAGGCTGCCAT10.6211180124223602No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTAGCCTTACCGTAATTCTGGGTTC10.6211180124223602No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTATATTTAAACCTGGATAAAAA10.6211180124223602No Hit
GGCGGGGGACCGGCTATCCGAGGCCAACCGAGGCTCCGCGGCGCTGCCGT10.6211180124223602No Hit
GAACCAGAGACGGGCCAGAGCATCCCCCTCCTCCACCATGAAACTCGCTG10.6211180124223602No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCGGGGGGGA10.6211180124223602No Hit
GTATATATGTGCATGTATTTTTTAAATTAAAGATGTCTAGTTGCTTTTTA10.6211180124223602No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTT10.6211180124223602No Hit
CATGGGTCACTGAGGCTTTTTATTTTGAGCACAAAACCACCGGGGATCTA10.6211180124223602No Hit
GCCTCGGTCTTGCGGGAGGCCAGCACCGGCACGAAGGCCTGGCTGAAGGC10.6211180124223602No Hit
AGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGAGC10.6211180124223602No Hit
CTTGATCAGGGCTGAAAAGTTCCATGGCAGCCTCATAACTGGAGGGTGTG10.6211180124223602No Hit
ACACAGTGAGCTTTGGGCTATTTTTTCCATGAGCTTAATGATGCTTTCTC10.6211180124223602No Hit
CTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCAT10.6211180124223602No Hit
TTTGAGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGGAC10.6211180124223602No Hit
TTTTTAGACCCAAAGACGGGATTTATTGGGGGCCCAGTCATCACCTGGAA10.6211180124223602No Hit
GACCTTATGGGTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATA10.6211180124223602No Hit
NCTGTGGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGCCGGGGC10.6211180124223602No Hit
GGATTACCATGGCAACAACACAACATCAGTAGGGTAAAACTAACCTGTCT10.6211180124223602No Hit
GTCGTCTTCGGGCAGGTCGAGCTGCCTGGGGCGCGGTGCGGTGTCCGCAT10.6211180124223602No Hit
GACTTCGACTGCCCGAGCATCGTTGCCGCGGCGACGGTTTCTGTCTCTTA10.6211180124223602No Hit
GGCTCAGACAAATACTTCCATGCTCGGGGGAACTATGATGCTGCCAAAAG10.6211180124223602No Hit
TTCTCATAATCGCCCACGGGCTTACATCCTCATTACTATTCTGCCTAGCA10.6211180124223602No Hit
GGTTTCGATGACACGCTGAAAGCTCGGGCAGATCTCTGCAGAAGCGGAGC10.6211180124223602No Hit
CAGGAGGCTGGCAGATTCCCAGTGGATACGGTGGGTGATCTTGGAGCTGC10.6211180124223602No Hit
ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG10.6211180124223602No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC10.6211180124223602Clontech Universal Primer Mix Long (96% over 26bp)
CACCATGACATATCATCTCACACCAGTTTAAAAGGCTACTTTTTAAAAGT10.6211180124223602No Hit
CTCCAACCGACTGCTGTCACCTTCACCGTTCCAGTTTTTAAATCCTGAGT10.6211180124223602No Hit
GCTCCCAAGATCCAACTACGAGCTTTTTAACTGCAGCAACTTTAATATAC10.6211180124223602No Hit
GTATATGCTATAGTCAGCAGATTAATCTTCACAGCCCATAAATTTGACCA10.6211180124223602No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAT10.6211180124223602No Hit
TAATTACACAGTGAGCGTTGGGCTATTTTTTCCATGAGCTTAATGATGCT10.6211180124223602No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA10.6211180124223602No Hit
TCTCTCATGTCAGAGTAGGCTCTCCACATGTCCCGAGCCCCATCAAAAGC10.6211180124223602No Hit
CAGTTGGGGATCTTCAGCTTCTAAATGCTAATTACACAGTGAGCTTTGGG10.6211180124223602No Hit
CCTATGACACTGAAACAGATCCTAGTGAGGGATTGATGAATGTTCTAAAG10.6211180124223602No Hit
GGGCTATTTTTTCCATGAGCTTAATGATGCTTTCTCTGGGCTTTTGGGGG10.6211180124223602No Hit
GGCCAGAGCATCCCCCTCCTCCACCATGAAACTCGCTGTCACCCTCACCC10.6211180124223602No Hit
GACTACCCCGATGCATACACCACATGAAACATCCTATCATCTGTAGGCTC10.6211180124223602No Hit
CTATTTTTTGTTGTATCCATTATCCTTCCCATTCTCTGGCACCCGTTCTT10.6211180124223602No Hit
TCCCTGCCCCGAGGGCCTCATAGCCAGGTCTCCTGAGAGCAGAGTGAAGA10.6211180124223602No Hit
GGGGGAGGGTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCCCTCATG10.6211180124223602No Hit
TTTATCAGCTGCAGCTGCTCCTGGCGGGCCCTGCTGTGCGGCTGCACCGC10.6211180124223602No Hit
GTAGGTCACCATCTACTCCGTTTATGGGAAAGAGCAGGTCCAAATATGGC10.6211180124223602No Hit
GAGTTGGCATCTTGTAACTCTCCTTTCTCCTTTCTTCCCCTTTCTCTGCC10.6211180124223602No Hit
AGATCTGCCCGAGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACA10.6211180124223602No Hit
ATTACAATCCTTGACCTCAGTGAAAGCAGTCATCTTCAGCGTTTTCCAGC10.6211180124223602No Hit
GCTGTCACCCTCACCCTGGTCACACTGGCTCTCTGCTGCAGCTCCGCTTC10.6211180124223602No Hit
CTAGTGAGTAAAAACTGAAGGCAAACAGAGTGTTTTGTGGAACTGGGAAA10.6211180124223602No Hit
TCCTAGAAGAAAAAATTTGAGCTAAAATGTTTCTTAGAGAACAGCTAAGT10.6211180124223602No Hit
GATCAGGACTTTTGTTCCAGGTTGCCAGCCCGGCGAGTTCACGCTGGGCA10.6211180124223602No Hit
GCCTCCCTCATGTCTTGATCAGGGCTGAAAAGTTCCATGGCAGCCTCATA10.6211180124223602No Hit
GTAGTATACCCCCGGTCGTGTAGCGGTGAAAGTGGTTTGGTTTAGACGTC10.6211180124223602No Hit
TCTAAATGCTAATTACACAGTGAGCTTTGGGCTATTTTTTCCATGAGCTT10.6211180124223602No Hit
CTCCTGACCTCGTGATCTGCCCGCCTTGGCTTCCCAAAGTGCTGGGATTA10.6211180124223602No Hit
AAAAACACAAACAGATCCATACATCACCCACAAAAAATAAAACATAGCAT10.6211180124223602No Hit
GTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT10.6211180124223602No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC10.6211180124223602No Hit
ATCCCACAGATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATAC10.6211180124223602No Hit
CTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGG10.6211180124223602No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAC10.6211180124223602No Hit
GTACATGGGAGATTCACTGCTATTCCTAGCAAACTACCAGATTTCATTTT10.6211180124223602No Hit
TATCAACGCAGAGTACATGGGACTAGCCCACCAGACTCAGAGACGGAACC10.6211180124223602No Hit

[OK]Adapter Content

Adapter graph