FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003625066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTC314.285714285714285No Hit
GTATCAACGCAGAGTACATGGGGGCGGCGGAGGACAGCAAGGTGGCTGGC29.523809523809524No Hit
AGATCCATCATTACAGAAATGAGGACGGGGTCTCAGGATGGGGCTGACAG29.523809523809524No Hit
GCAGAGATACACATGCCATGTACAGCATGAGGGGCTGCCGAAGCCCCTCA14.761904761904762No Hit
GAACTGATTGCCAACTTCCCAGTGGAAGGCACGCAGCCACGGCCACAGTG14.761904761904762No Hit
GGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGA14.761904761904762No Hit
GGACTACGAGACCTTGACGCGGCCGTTCTCTGGACGCCGGCTGCCGGTCC14.761904761904762No Hit
GTCCTCTGGCGGGGAGCTCTTCCTCCGCGTCATCAGTCTTGCCTCCCTGG14.761904761904762No Hit
GGCATTGATGGCCATTTCTTTCTTGTCCTGTTTCATCATTGCTGCAGCTC14.761904761904762No Hit
AACCTACCCTGTGCAGCCTCCTGGGAATCCAGTATACCCTCAGACCTTGC14.761904761904762No Hit
GGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATACAAGGA14.761904761904762No Hit
CAGATTAACTTCGAGCAGTTAACCAGGCAAGGATATTTCCGGCATCAAGC14.761904761904762No Hit
CGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGC14.761904761904762No Hit
CTTCTCTGCTTGGAGGGGATGTGGTTTCCGTTAAGCTGGACAACAGTGCC14.761904761904762No Hit
GATTAAACTGCATTACAGCCTGCAGGACACCTTGGGCCAGCTTGGTTTTA14.761904761904762No Hit
GTAAATAGCAGCTATGTGTGTGCAAAATAAAAGAATGATTTCAAAAAAAA14.761904761904762No Hit
GGTCGGAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)