FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003625163

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625163
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCGGCCGGGCCGCCAGCACCCGCACCTGGACCAGTCCGGCCCGCAGTT32.459016393442623No Hit
AATGGAGGATATTGATATCGCTATATATCTTGTCCATTCTATGATGCCTT32.459016393442623No Hit
GTATTGTAGGTGTATTGGTAGGCCTGGGTGGCGCCATCATCGAGGACGCG21.639344262295082No Hit
GCCCGGTCCCTTGACGCCGCGCGTGATCGGGTCCTCGCCCTGTCTCTTAT21.639344262295082No Hit
CCTGGACGAGGCGCTGCCGGGCGGCTTCGCGATCCAGGCCACCGACCGCC21.639344262295082No Hit
GGGATAAGCTCTATCCGAAGGATTGAGAGGCCAAACGCGGGGAATCGGGG21.639344262295082No Hit
CGATGGAACAGCGACGCTGAATGAGGACTTGTTTTTCACTGCACTTTGCA21.639344262295082No Hit
GAGTTCGAGAATTGGCGCCGGGTGCGCGATTCCGAGGGCGCCGAGGGTTG21.639344262295082No Hit
GAGCTGCGAGTGCTGGAGATGGAGCTGCTGGTGCGGCGTTACTTTATGTT21.639344262295082No Hit
CTCCTTTACATCTTCGGCTACCCTGCCCCGGTTATGTATCTGTCTCTTAT21.639344262295082No Hit
CCAGGAGTCGGCGACCACCCGCGCCGGGTCCGGGCGCCCGGAATCGCTGT21.639344262295082No Hit
CAAATACTTTTTATCTGGAATACTTTCAGATGGTATGCTGAATTTCAAAT10.819672131147541No Hit
GATGTGGTCCTTTCGCCTCACTCGTCGACGACGTCACGCCGCGGCACGAG10.819672131147541No Hit
AATTTAGTTGGAGCTACTTTGTTTTTAGGAGTTAGTAATGAAGCTGAAGC10.819672131147541No Hit
GGATCGTACTGGACCGAGACATAGAAGTAAGCGAAGAAGATGGTCAGGAC10.819672131147541No Hit
CCAGCGTGTGGGGCTCGCCGCGCGAGGCCCGTCGCGTGCCGACCAGATCA10.819672131147541No Hit
CTCCACCTCCTGGGTTCAAGTGATTCTTCCACCTCAGCCTCCCCCTGTCT10.819672131147541No Hit
CCCGTACGCAGCTCCTCGCGGGTAATCCACCTGTCTCTTATACACATCTC10.819672131147541No Hit
GGCCGAAGCCGAGGAGTTGGCGGAATTGAGACGCGAGCTGGCGCATCTGA10.819672131147541No Hit
CGACAATCTCTGACACACACGCACCGAACTGCACGCTCTCGACGCTGTCT10.819672131147541No Hit
CTGAATATCCGCCGGAGCCACGCATGACGATTGAAGTCCAACACATCCGT10.819672131147541No Hit
GCTATCGATGGCGACCAGCCCAGCAACGTCACTGACCTCACCGCGCCAAC10.819672131147541No Hit
CAATTCTATTGGTATCCGGCGGCATTCGCCGCGTCGTCGGCGGGCCGCGG10.819672131147541No Hit
GCATCATGCAGGGCGCGGTGAAGGGGTGACTGTGTTCCCGGAAGGATTCC10.819672131147541No Hit
ATAGATCGCCGTCTCGACGTACTCAACGCCACCGAAGCGGGCGATGCCAT10.819672131147541No Hit
TCGTTATAAAGAAATTCATGACCATGAAATCGTTATTGTTAAACGTGACG10.819672131147541No Hit
CCGATCGAGTTCGCCTTCCTGTTCGTGGCCCCGGTCCTCTACTTCTTCCA10.819672131147541No Hit
GTGGTGAACAACGTGTAAGCTTTAATGTGATTGATCATATTGGAGCAGGA10.819672131147541No Hit
GCCACCACCAGGACGCCTACCTCGGTCTCCAAGCCTGTCTCTTATACACA10.819672131147541No Hit
GTGGTGCATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGGCAGGAGAAT10.819672131147541No Hit
GCGTGCGCCACTGTTAGTCGAACACGTGTTCGCCAGCGCGGGTAGGGATT10.819672131147541No Hit
GTCAACACCATGGACCTGCACGTCGGTTCGGGCCGGAACCGGGACACCGT10.819672131147541No Hit
GGGCTTTTCCTTGCCAATCGCGGTCGCAATCCGCTGACTGGCCACACTGT10.819672131147541No Hit
ACTAATCGCATCAGCGATGTGCCGGGCGTGCGCGTCGGACATTACACGCT10.819672131147541No Hit
CTCGGCCAGCCGCGGCATGACCTGTTCATTCATGGCGGAGGAAAGCGTGA10.819672131147541No Hit
CCGGGTCGCCAGCGACAGGCTGACGCCAGAGGGATTGGCGAACTCGGGCA10.819672131147541No Hit
GCGCCGGTGGACAGCACCTCGGTCGTTTTCATCGCGTTCGCCCACTCGGG10.819672131147541No Hit
ATGTCCTCCTGGGAGGTGAGCTGCGAGCCTACAAGGAAGGCATGCGCGTG10.819672131147541No Hit
GTGGTGCTGTTGTTCGGGGCGCACGCCGGCCGGCTGGACGAGGACTGTCT10.819672131147541No Hit
GTGTTCGGACACCTGGGGCCGAGTAGTCGCGTCGCGCCGGGCGGGTGGAA10.819672131147541No Hit
GTTGGCCTCGGCCCCCGGCGGCAGCCAGCCCCGGCCGCCGACGGCGGTGG10.819672131147541No Hit
GCGCCTGGGCGCGGGCGATCTGGGCGTCGCGGTCGGCGTCGGCCAGCGTC10.819672131147541No Hit
GGTCTTGTTCCAGTTTTTTGCGCAGGCGGCTGACCTGGCTATCGATGCTG10.819672131147541No Hit
CATCGCGTGATAAATACCTGATGGCGCTGCGCTTTTCAGGCCTACGACCG10.819672131147541No Hit
CCCATGGTCTTTGCAACCCGCAGACCAGGAGATTCCCTCGGGTGCCTATA10.819672131147541No Hit
CCCTTTAGTCGGTTGCGGCACATCAGGCACCCTTAGATCCCACACACGTC10.819672131147541No Hit
ACTTAGGGCAGAACGTTTCACTCTACCTTTTTGAGTAGCAAAGACTAAAT10.819672131147541No Hit
AAATACCATTCTTGATAAACTTCTTGTGCAAGCATCCAGAACGGACTTTT10.819672131147541No Hit
GGTTTTCAACGGCGAGAAGAGGATGGCTCAATGGTTCTCTCCGCTTTTGG10.819672131147541No Hit
CTCCCTCATGGCGAACGTTTCTGCGATGGCACGCCCGATTGAGACCTCCG10.819672131147541No Hit
GGGATGGCATTGAGCACGTTGGTGACGGGCTGGACCACCGCGGCCGGGCT10.819672131147541No Hit
GATCGTGCTGCTGCTCGCGGGGCTGGGCCCTGTCTCTTATACACATCTCC10.819672131147541No Hit
GCCGGTGATCACGGCCTGGTCCGCGGTCTCGCCGTTCGGACTGGGCCACA10.819672131147541No Hit
GAGTATAATGGCACAATCTCGGCTCACTGCAACCTCCACCTCCCGGATTC10.819672131147541No Hit
GCCGCTGATCGGCCTCTGGTTCGTCGTGGCGCAGTGGCGCCTGTCTCTTA10.819672131147541No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTGGCGGCTGAACATCGCGTA10.819672131147541No Hit
GCTCCCGATCCTTGCCATAGGTAGCAAGGAGAGCCTGCGCCTCGATCGGG10.819672131147541No Hit
GCCGCAAGGGCCAGCAGGCACTAGGAGGGTGTAGTCCGGTGATGTGGGTG10.819672131147541No Hit
GTTCTATGTTGCTGGCTTGGATGGGGATTCGCGTGCGGCGGAAACGTTTA10.819672131147541No Hit
GTCAATTAATGACAGATAGAGATACATTAGACGTTAATGGTGAACATAAA10.819672131147541No Hit
ATGCTGTGGAGACATGCTGACGCAAAAAGTCTCGAAACATCGAAATAGGA10.819672131147541No Hit
GTGCACCGACGCCTTCGTCATCCATCACCCGGAGGCAAACTATTTCAATG10.819672131147541No Hit
GTTTCGTACGAGTAGGCATCGCCCGCGCGGGCGAAGAGGAGGCGCATAAA10.819672131147541No Hit
CCGCGGACGCACTCCAGCCAGAAAAAGCGCCTCGTCGGCGTAGATGTTGC10.819672131147541No Hit
GTGATAGCGAGTCATTAAGTGCCAGAGAGTCATTGAGTGCCAGTGAGTCA10.819672131147541No Hit
GTCGAGCAGGCTGACGGTGGGCGTCGCGTTGCGGCTCTCATCGGTGTCGA10.819672131147541No Hit
GTCATTGACGACCTTGACTTCTTCCCCGATCTGTCGGTGGTAGAACACCT10.819672131147541No Hit
GTGTGGATCCTCCCGACCTACCAGGATTGATGAGGATGGGGGTATTTGGG10.819672131147541No Hit
GTTCCTTCAGTCCGTGGTACCAGCGCAGGACGCGGCGCTCGACGAGTTTG10.819672131147541No Hit
CAGGAACAACTGCTCGTCGTGGCGTTCAATCTTCGGTCGCTGATGCGCTG10.819672131147541No Hit
GTCACCGCATGTACCTCTGCGGGGTCTAGGCCGCCCCAGTCGGCCTCGGT10.819672131147541No Hit
CCACATCAAACCTTTATGAAATGGTTTGGTAATGATCCAGCCCTTGATTA10.819672131147541No Hit
GAGGTGGTCAGGTACCGCACGGCGGTGGTCATGTTGGGCGTGGCCTCGGC10.819672131147541No Hit
ATTTTTATGCAACGAGGCTATAAAATTTTCGTAGTTGCCATGCTCCAGCC10.819672131147541No Hit
GTGATGTGGATGCCGGCCATGCTGCACCTTCGGGGCCGTCACTCCTGGGC10.819672131147541No Hit
GAATAAAATTGCTGATGGATTAAATCCATTAATCGTTGGCGGTTTAATTG10.819672131147541No Hit
GCCTGACGATGCAAACACATCGGGCGGCTTCAGCATCTCGGGCTTGGCCG10.819672131147541No Hit
ACCTGAATCATCAGAATCCAGCAGGGCGAAGGCACGAATGCGCTCAGGAT10.819672131147541No Hit
ATCCAGCCCAGATCAAAGTCCGGTGGTTTCGGAATGACCAGGAGGAGACA10.819672131147541No Hit
GTCTGCACGACGGCGCCCGCCTGCTGGCCCTGGCACGCCTGGGTGATCGC10.819672131147541No Hit
CCTCGTCGGCGGTCTCGGTCGCGTGCACCCCGCCGAGCCGTTCCCAGGTG10.819672131147541No Hit
AAAAAAGCCTTCCGTGCCTACGGAAAGCTTTAGCCCTTTACCGGCTTCAG10.819672131147541No Hit
GGTCTTGTGTCCGCTGCGCCCAAACCACTCATCAACATCAATGGTCTGAT10.819672131147541No Hit
CAACAAGCTGAAGCAGTACAGCGAGGAAGGGCTGTCGATCCCGATGCCGG10.819672131147541No Hit
GGGTCGTCGGTCGGCAGGGCGTGCACCTCGGCGACGGCCAGGGTGTAGAG10.819672131147541No Hit
AGGCTCGAACCGGCCAGGCTGATGGAAGTGATCAGAGCGGCCTTATAAAA10.819672131147541No Hit
ACCCCGCGCCGGCCGCGCTGGCGCTGTCCAGCAGCGCCACCTCGTCCTGG10.819672131147541No Hit
GACCGGATCGAATCCGCCCGGATGCCAGGGGCCACATTTGCAGACCCTGG10.819672131147541No Hit
GTGTCCGTTATTCCGGCGGTCGATGACGAGAAACTCGCAACATGCAGCGT10.819672131147541No Hit
TTTCCGTCTGGAACTCGAAGAGAAGATGGAACTGCCGCGCGATGAAAAAG10.819672131147541No Hit
AAGAGGTACACTCTCAAAGAGGTACACTTTAAGGTACACTCGTAAAAATG10.819672131147541No Hit
CCGTAACCGGGCTCGCCGACGTGCACCCAGCGGTGGGCGCAGATCTCGAA10.819672131147541No Hit
GACCAGCGCCGCCAGTTGCTCCCTCAGTTCACCGATCTGCGCCTGGAGCT10.819672131147541No Hit
GCTGACCGTTTGCAGCGTCTCCGCTTCCTGGGCCTTCGTCGGATACCCGA10.819672131147541No Hit
AACTGCACATTCGCGCGCGTGATCCGCGTCAAATCCTCTGACAGCACGAC10.819672131147541No Hit
GCCCTACTTCATCATGACTTGTTTCAGTTGATTGTTTGCCAAAAATGGAA10.819672131147541No Hit
CCAGCGTCATGACGATGAAGTAGACGATCGCCCGCAGCGCCAGGCCGCCG10.819672131147541No Hit
CTTCGCGCTCCTGCTCGGCTGCACCATCTTCGCAAGCTGTCTCTTATACA10.819672131147541No Hit
AGGATGGGGTTGAGCGCGTTTCGGAACGCGTCGGCCACTGCCAGGCCACC10.819672131147541No Hit
GTCCTTGGCGAATTCGATGACCTTGCCAGCATAGCGAAGTGCGAAGAACA10.819672131147541No Hit
GATTACAGGCATGAGCCACTGCTCCCAGCCAAGAGTTTTTAATTTTGATG10.819672131147541No Hit
CTATCTGGACTACCATTCCCGAAACCGCAGACCGAACCAGAATGCGAATC10.819672131147541No Hit
CGCGAGTACTGGGGCAAGCACCAGACGGCCACGCTGCGGTACGAGCGGTA10.819672131147541No Hit
GGCCGAGGCCCTGGGCATCACCCACTGTCACATCTCCCTCAGTCATGACG10.819672131147541No Hit
CTGGAGTGGAGCGAGCTCGTCGCGACGGAGGTCTTCAACTCCAACAAGGC10.819672131147541No Hit
CTTGAGCGGCGGCTCCCCGGCCTCCGCGTAGAGCAGCGCGAACCGCTCCG10.819672131147541No Hit
TTTCAGAACTACAGTTAGTGATGGATTGGAATCAGTTGGCGGGCCAAGCC10.819672131147541No Hit
AGATTATTCCATTCATCACAAGGAAAATAATCTAAAAGATGAGGAGTCTT10.819672131147541No Hit
GCTAGACTCGGGGCATGAAGCTGAACAGGGCAGAAAACGTCAACACCGCC10.819672131147541No Hit

[FAIL]Adapter Content

Adapter graph