FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003625164

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625164
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATCGATTCGTTCTCATTTGGATTACGCTCTACAATTTTATATAAACCG32.459016393442623No Hit
CGCGTGCACGCCTGCGTCACCGGGTTGGAACGAGTTCGTGATTCGGACCA32.459016393442623No Hit
CCTCGCCACCTCGGCACGAAACAAAGGCTGCACGCGCTTGGATGTCTCCG21.639344262295082No Hit
GCTCGTCCTTGTGCTTCATGGTCACCACCGCGGTGCGGCGGCTCGACAGC21.639344262295082No Hit
ATACATAACCGGGGCAGGGTAGCCGAAGATGTAAAGGAGCTGTCTCTTAT21.639344262295082No Hit
ACCTCGTGCTGGGCGCCGCGCCGTTCGTGGATGTCCGCCCGCTGGACGCG21.639344262295082No Hit
GAAATCCAGGGGCCCCCGATTCCCCGCGTTTGGCCTCTCAATCCTTCGGA21.639344262295082No Hit
GTCTCATTCCTGCCAAATAAGCTTTTTGGCAAGCCACTCGCAGTGGAATA21.639344262295082No Hit
GCTGCTGATTCATGGCTTCGTTGGATTCCGCCTCGGCGGCCTCCAGCTTG21.639344262295082No Hit
CCAGCGATCAGCCCGTCTGCATCCAGCGCGTCCTCGATGATGGCGCCACC21.639344262295082No Hit
GGCGAGGACCCGATCACGCGCGGCGTCAAGGGACCGGGCCTGTCTCTTAT21.639344262295082No Hit
GCTGATCAGGTGCTCGTACCAGGTTTTTTCCAGACTGATTCTTAGCAAAG10.819672131147541No Hit
CCGTCGAGCAGCACGGTGCCCGAGTCCGGGTATTCCAGGCCCGCGATGAT10.819672131147541No Hit
CTCCCACGCTGCATGTTGCGAGTTTCTCGTCATCGACCGCCGGAATAACG10.819672131147541No Hit
GTATCGACCTGAGGCCGTGGTTCCACGGCGACGACCGGGACCGCGCCGAG10.819672131147541No Hit
GGCCCAGCCCCGCGAGCAGCAGCACGATCCTGTCTCTTATACACATCTGA10.819672131147541No Hit
CAAGCAATGGGATATCTAAATTCCCGCGGGGAGGAAATTCCCCCAGCCAG10.819672131147541No Hit
CACCTACACTTGGCTTTTTATTTACTTTTACTTGTGTATAACCGTAAGTT10.819672131147541No Hit
ATGATTGCCGCACTGGCCGAGCAGAAGCAGATGGCCGAGGCGAAGATCGC10.819672131147541No Hit
CGTGGCGCTCACGCCGGTGCTCGCGATCCCGCTCGTGCCGCGGCGTGACG10.819672131147541No Hit
GCCGCCACCTCGCCGGTGTCGCCGTTGGCCACCCGGCCCGGCTGCCGGCT10.819672131147541No Hit
CCATGATACCGCCGCCGACGCCGCTCTTGCCGGGCAGACCGACATGATAG10.819672131147541No Hit
CACCGGGACTCAGTGTCGACGAGAGTACCGTCGAAATCCCACAAGACAGC10.819672131147541No Hit
AGCAGGGCGAGTCCGCGGGTCAGGAGGCGAGCGTACGTCCGCTTGGCCAG10.819672131147541No Hit
CTCCTCGCCGACGTACTCGATGTCGACGCGCCACGGATAGGGCCGGTCCG10.819672131147541No Hit
TCGTTGCACTCCAGCGCCAGCGGATTGACCGTCGGCAAGCTGCGGCCCAA10.819672131147541No Hit
GGCCACTTCCAGCGGACCGGCACGCCGTACGTGCTGCGGTTCTGAGTGCG10.819672131147541No Hit
GGTGAAACTCCGTCTCTACTAAAAATCCAAAAAATTAGCCAGGCGTGGTG10.819672131147541No Hit
ACCCGGTGAAGGGCTACTCGATCACCGTGCAGCTCGACACCGATGAGAGC10.819672131147541No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.819672131147541No Hit
GCCTACAGTCGCAGGTGCGCAAGCCGGCCGACGCCAAGGCCTACGAGACC10.819672131147541No Hit
GATTATTCTTTAGTTGCTGGCTCTTCAGATATTGCTGCTTCTTCTTTAGT10.819672131147541No Hit
GTGTAGGCGGCCTTGGTGGCGGCCGTGGCGCACGCGCCGGTTGTCCATCC10.819672131147541No Hit
GGGCCGCGCTGTACGCCGAGGCCCTGCGCACCGGCACGAAGGTGGTCGAG10.819672131147541No Hit
CGCTCCCTCAGATGCGCCAGCTCGCGTCTCAATTCCGCCAACTCCTCGGC10.819672131147541No Hit
CTTGCGAAGATGGTGCAGCCGAGCAGGAGCGCGAAGCTGTCTCTTATACA10.819672131147541No Hit
CCACTCGCTCCCATCAATGCATATGAAAATGTGACCTGCGCACGACTTCT10.819672131147541No Hit
GTACTGGGAATCGTGGGTGGCATCGTGGGTGGCATCGCGGCCGGTTCCGC10.819672131147541No Hit
GACCATTACCGAGATATACGATTTTATGCGCCTCCTCTTCGCCCGCGCGG10.819672131147541No Hit
GATTGTGAACTCTGGCTCCCCCGGCACCCCGGATAACTGGTGGCAGCGCA10.819672131147541No Hit
CGCCCAACGGTCCCTCGCAGCAGCGGGTGATCCGGGCGGCGCTGGCCGCC10.819672131147541No Hit
GTGTAGGGACGCCCTGTGTTATCGGGGTGCAGCAACTTAGTCTCGATGAA10.819672131147541No Hit
AGGTGCTGCGGCTGCCGGCCGGCGAGCGGCGGCTGGACGTGACCACCGAG10.819672131147541No Hit
ATGGTGGGTTGCCACCATGCCGGGCTTTGCCATCATCGTCGTCAGCCTCG10.819672131147541No Hit
GTAAAATGCCTGCTCAGACAGGCACGACGGTTTTCCGGTCCGGACGTGAC10.819672131147541No Hit
ATTCCATTTTTGGCAAACAATCAACTGAAACAAGTCATGATGAAGTAGGG10.819672131147541No Hit
TCGCTGAGATCTTCGATATTGAGGATCTGGTTGTTGACGATGTTGTTGCA10.819672131147541No Hit
ATAACGACCCCTATGAGGCGCAGCTGACGGCTGCGCGGTCGTTCGCGGCC10.819672131147541No Hit
GATCGTCCATTTCTCGACTACGTCATCTCAGCGCTAGCCGACGCTGGCTT10.819672131147541No Hit
GACCCCGGTAGTGCGAGCAGTGAGCCATCCTCCGACGAGCCCGAGGCCGG10.819672131147541No Hit
TTATAGAATAATCTATAAATGACTGCACCAATCATTCCTCCAGTAATTGG10.819672131147541No Hit
GGGGGACGGGGTGGCGTCACCAAAAAATTTTTTACCCCAGAACGTCAGCC10.819672131147541No Hit
GGATGGTCACCGCGCCGATCATCTTCCTGACCGTGGTGGTCGGCATCTGC10.819672131147541No Hit
CGCCGCCACCGTGCAGGGCGATCCCGGCCAGCCGGTGTCGCTGAGCCCGG10.819672131147541No Hit
GGGTGTGGTGGCAAGCGCCTGTAGTCCCAGTTACTCAGGAGGCTAAGGCA10.819672131147541No Hit
GGGCGGGCACGGGTACAAAGATTAAGAGGAACGCCTCAATCTTCGATTTT10.819672131147541No Hit
ACATGCAAGTGCTGCCGGTGAACGACGGGCCGGCCGGTGTCGACCTGGAC10.819672131147541No Hit
GCTCTACACCCTGGCCGTCGCCGAGGTGCACGCCCTGCCGACCGACGACC10.819672131147541No Hit
GTGGATTACCCGCGAGGAGCTGCGTACGGGCTGTCTCTTATACACATCTG10.819672131147541No Hit
TTATTGATCCATGGCTTCAGTTGCAAACTGAAGCCGGTAAAGGGCTAAAG10.819672131147541No Hit
CAGCAGCACCACGGCCTTCCGCAGTTCGACGCTGGCCACGATCATCGTCG10.819672131147541No Hit
CAGCCACTCCAGGCCGGCATCGGCACCATCGCCAATGCGGTGATGCATGG10.819672131147541No Hit
CTCCTGCTGGATAAGCGCCATGCGCTGATATTTCGGGTATCCGACGAAGG10.819672131147541No Hit
GGGGAGGCTGAGGTGGAAGAATCACTTGAACCCAGGAGGTGGAGCTGTCT10.819672131147541No Hit
CGAGGGCCGTTGCCAAGCCCAGTCGACGCCGCTGACCGGAAGAGAGCGTG10.819672131147541No Hit
GCCCAAACGGCCACCCAGTTTTGTGCTTGAAACCCAGGGACCTGGTGGTA10.819672131147541No Hit
CAATGATTCACTCTCACTTAAGGATTCACTCTCGCTTAATGACTCACTGG10.819672131147541No Hit
GCCGATCGCCGGATCGGAGGCGGTCGGAGGTCTCAATCGGGCGTGCCATC10.819672131147541No Hit
GCTTGGAGACCGAGGTAGGCGTCCTGGTGGTGGCCTGTCTCTTATACACA10.819672131147541No Hit
CGTCGAGAGCGTGCAGTTCGGTGCGTGTGTGTCAGAGATTGTCGCTGTCT10.819672131147541No Hit
GTTTATGAAATCCTGATGAGTGAGTCATACATAGGTTTAGATACAACTGT10.819672131147541No Hit
CTTGTTGCCCAGGCTGGAGTGCAATGGGTTTTTTTTTTTTTTTTTTTTTT10.819672131147541No Hit
TCTCGATCATCCAGCTGCAGCGCAGCTTCGCGGTGCCGCAGATGTGGAGC10.819672131147541No Hit
ATGTAAGAGATAAAACCATAGAACTTGTAGAAGAAAACAGAGGAGTAAAT10.819672131147541No Hit
GAGCAACCACACCTGCCCGAACACCCACATCACCGGACTACACCCTCCTA10.819672131147541No Hit
GTAATTATAGTAACAGGCGGCGCCAAGGGTATAGGCGAAGGTATAGCCAC10.819672131147541No Hit
AGCGTGGGCACACCGGCGCGCTGATTGTGCTGGGAGACGGGCCAGAGGTG10.819672131147541No Hit
ATACTATTAGGTAAACGATTCACAATACTGAAATCTGGTGCGCCTTTAAA10.819672131147541No Hit
GTTGAAGACGACGAAGTCGATGCCGCCCTGCGAGAAGGTGAAGCCCATAT10.819672131147541No Hit
GTTCGAGCGCGAGCGGGATCGTTTCGTGGCATCCCTCGAGCGCGCCGCCG10.819672131147541No Hit
CCATTGTCCCGGATACTCGCGAACCCAGCTTTCAACTTTGTCATTCAAGG10.819672131147541No Hit
TGGTATTGGAGCGAACGCCGAGCAGCACGTCCTCCCAATGCGGGGTGACG10.819672131147541No Hit
AGTTAGGCAGGGTGATGCTTAAGGTCCGGAGGTTCAGTAGGCCAATGTAT10.819672131147541No Hit
AGCGGGGCGCCGAGGTCTCTCCCGAGCAGGTCGCGGCTGCCCTGGACGCC10.819672131147541No Hit
GTACGACGGTGGCCTGGCAGTGGCCGACGCGTTCCGAAACGCGCTCAACC10.819672131147541No Hit
GGTGGCGCTGCGCTTACCGGGGCTACGGTCGTAGGCCTGAAAAGCGCAGC10.819672131147541No Hit
GTGTGTCATAGCTAACTGATTAATAGTGAAAAAATCAGAGCTCGTTACAA10.819672131147541No Hit
ATGTCGCCGCGCTTGGCGATGCCGCCGCCCAGGCTGGCCAGCGACAGCCT10.819672131147541No Hit
GGGCCCGTGGGCCCGGCCGGGTCGTAGGTCAGGTGCAGCCTCGCGGACGC10.819672131147541No Hit
GTCTTCTTGTCCGCCGTGGCGCTGGACGTGCTGGACTTCAGCTCCAGGGC10.819672131147541No Hit
GCGCCACTGCGCCACGACGAACCAGAGGCCGATCAGCGGCCTGTCTCTTA10.819672131147541No Hit
GACTTACTAGTTGCTAGTCATATAAAATCATGGAGTAACTCTAATCAAAA10.819672131147541No Hit
GCCCTCGTTCAACCCGGACCAGATTCGCGCGCGCACCTCCCTGACCAGTC10.819672131147541No Hit
TGTTCCGGCAGCAATGATATAGATACGATCTGCTTCGGCAACATCTTTAA10.819672131147541No Hit
CGGCGTGGCAGCGGCCACGCCGTCCACGAAGGCCTTGTGGCCCAGTCCGA10.819672131147541No Hit
ACACCGTGGTGGTCGTGGTGTTCAAGGTATGAATACGCTAGAAGAAGACT10.819672131147541No Hit
GTTCTTGGGTGCGCCAGCCGGTGCACAGGGTAGCGGCGTCCGGGCCGGCT10.819672131147541No Hit
CGCCTGGGGTCCGTGACTTTCCGTCGTGGCACGCTCACGCCTAATCAGGA10.819672131147541No Hit
GGCCACGATCGTCCCGGCCACCGGGCCGCGCTCACGCAGCAGGGCGTCGG10.819672131147541No Hit
CCTCGTTAACTCCCGCAGGGTGAGGTGTCCTAAAATATTCTTTGCCCTTG10.819672131147541No Hit
GTCCATCACCGCCGCGATTCGCATTCTGGTTCGGTCTGCGGTTTCGGGAA10.819672131147541No Hit
GCGCTCGGCTTATGCGACGCAGACTGTCGACTCACCGAGGCCGACTGGGG10.819672131147541No Hit
ATCCACACTTCTGTCTGATCGCAGATAGTAAAGGTTGAGCGGATACCCTT10.819672131147541No Hit
GAGAGTTGCACCGATGAATGACCCATCGCTGACGGGTACCATCACCGTTA10.819672131147541No Hit
CAACACCGTGCTCTCGCGCGACCGTCTGCTGGACCTGACCACCGGTACCG10.819672131147541No Hit
ATCACCCGGCACCTCGACCTGGAGGACGAACTCGGCGGCTACGTCGCCGA10.819672131147541No Hit
GTAACAGAAACTCAATATCCCCTTACGCCACTCCACGATGATGGGGTTCT10.819672131147541No Hit
TTCCGAATCTGGAATCCGAGATAACGCCACCGTCCGCCGGTTAGGAGACC10.819672131147541No Hit
TCCTCGTCCAGCCGGCCGGCGTGCGCCCCGAACAACAGCACCACCTGTCT10.819672131147541No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)