FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003625442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCACCAGGAGCCGAGGTCGGCGTCCTCACCCTCGCCGCCGGGGCGCCC45.970149253731343No Hit
AACGTCGACAGGAAGTCACAACAGAAGGCGGACTGGATGTCGTGGGGCAA22.9850746268656714No Hit
TCAACGTCCAACGCGGGCACGCCGCTGACGACCGACGCAACGCCGCTGCT22.9850746268656714No Hit
CAATACCCCCTGCGCCTGATAAGAACCGCCTGGCACGACAGGTAAAATAC22.9850746268656714No Hit
TCTCTGTCTCCTCTTCACTCTGCAAACATGAAGAAGAAACAGAAAAAGAA22.9850746268656714No Hit
CTCTTGCAGCTCGCGGAAGTCCAGCTTGCGATCGAGATAGCCCGTGACGG22.9850746268656714No Hit
ACCCGCGGGTTCTATGTGTCACGTACGCAAGCGACGACTGGAAGGTCGGC22.9850746268656714No Hit
TTCCAAAAGATAAGAATCCTGGCGATAAAGTCACAGGTAAGATTACAGTC22.9850746268656714No Hit
GTTCCCGGCTTTGATCTTCGGCCTGCTCGGGTCCTCCCGCCTGCTCGTCG22.9850746268656714No Hit
CAGCATGGCCTTCTGCGGCACGCTGGGCGTGCTGCTGCTGGCCTCCATCA11.4925373134328357No Hit
GGTGTGAAGCGGATGACGATCGTGCCGTCGTACACGGGCACGAGATCGTC11.4925373134328357No Hit
ATCCACACGGCCTTGACGCGCCCGTCTTCAATGGCCTTGAACAGGTCGAC11.4925373134328357No Hit
GTTTTCCACCACCACGATGGCATCGTCAACGAGAATACCGATCGCCAGCA11.4925373134328357No Hit
GGCGAAGGGCATCGAGGTGGTCGTCTACGAGCCGACCTTTGACGGCGACG11.4925373134328357No Hit
CAGGAGAGCCGGTTTGGGCTGGCTGTCCAGATGTCGCCAGGACAGCCCCA11.4925373134328357No Hit
TAGTGCAGCATTTCCTCACGAACCAGTTGTGCCAATTTGACCTGTAAATC11.4925373134328357No Hit
TAGGAAAACTGGTCAACTAAAACAAAAAGAAACTAAATTTCGTGAATTTC11.4925373134328357No Hit
GCTTTCCGCATTGACGAAGTGGCCCTGGAGATCGATCTCGTGCCCGAGCG11.4925373134328357No Hit
GGACTCGACAGGCGGGAGGGCGTCCCGCCGGTGGTATTCGACGCGCGGCG11.4925373134328357No Hit
GCGCAGCATCGGATTCGCGCGCAAGCGCAGCATCGGATTCGCGCGCGAGC11.4925373134328357No Hit
AGCGCAAACAGCCAGCGCTGGCGCGTCGGTTCCAGCGTAATGTTGTAGTC11.4925373134328357No Hit
ATCACGTGCTGATCTCGTGCATTTCGTCTTGCGGAAAATGTGCGAATTGC11.4925373134328357No Hit
GCGCAGCATCGGATTCGCGCGCACGCGCAGCATCGGATTCGCGCGCGAGC11.4925373134328357No Hit
GTGCCAACCCGGTCGTGACGTTCTTCCGCATCACCCTGCCCTTGAACGCA11.4925373134328357No Hit
GTCGATGGCGACGGGCGCGTCCGGGTCGGACGGTGGCGCTGCGTCGAGCG11.4925373134328357No Hit
GAACTGGCGGGTTCGGATGCAGGTGCCGGGCTCGGTGCCGCTGCGGGTGC11.4925373134328357No Hit
CGGCATGGCCTTCTGCGGCACGCTGGGCGTGCTGCTGCTGGCCTCCATCA11.4925373134328357No Hit
GTCCTCCAGTTCACCAATATCGACCCATGCCTCCAGCACTGGCCGATATG11.4925373134328357No Hit
ATACACGATCGCCGACGACACTTCCGCCTCGGTGGCAAAGCGCCCGAGTG11.4925373134328357No Hit
CTTGAGGAGCCCTTCAGCCCCCTGCTGCACTGTGGGAGCCCCTCTCTGTG11.4925373134328357No Hit
GGGCGGGTGTCTCGGGCGCAGCAATGTCGTAGGCCATGGCCTCACCGCCG11.4925373134328357No Hit
GCGCCTTTACGCGCGCCACCAGACGCCATGTTTTGATTTCTCCGGGGTGA11.4925373134328357No Hit
GCATGTAGCGGAACAGCAGTTCCTTGGCGGTCAGCGCGCCGAGGGCCACC11.4925373134328357No Hit
GGAAGCCGCTGAACACCGGCTGGTCTACGCCAAGCAACAGCTTTACCGCG11.4925373134328357No Hit
ATGTCGACGATGCCTTCAAGGCGATGATCGCCAAGGCCCGCGGCGGCACG11.4925373134328357No Hit
ATGTTCGGCCTGGCGCTCTGCGGCTTGGGTGTCTGTGATGTGCATGACGG11.4925373134328357No Hit
GGTGTGAAGCGGATGCCGATCGTGCCGTCGTACACGGGCACGAGATCGTC11.4925373134328357No Hit
GTGGTGGCCGGCTTCGGGCGCGTCATCGCCGAAGTGGGCTCGGCGCTGAT11.4925373134328357No Hit
GCTTGGGCGCGGTCGCGGGCCTCCCCGGCGCTCGCGCCTTCACCCCAGCG11.4925373134328357No Hit
ACCCAACTGCAAATGCAGGAACAGATCGGACGCCGGCGTGATCGCCGCGT11.4925373134328357No Hit
GTCTTAACCCGACCGTGGAAGCAGGGCAGCAGGAGCGCAATCGTTTGCTT11.4925373134328357No Hit
GTGCCAACCCGGTCGTGACGTTCTTCCGCATCACCCTGCCCGTGATCGCA11.4925373134328357No Hit
CCGAACTGGTGTTCACCGCCCAGCCCACGCTGGCCGCCGCCCAGGCCTTC11.4925373134328357No Hit
ACTCGCCAATGGATGGTTGCGGCATCTGGATTCGAACCAGAGACCTACGG11.4925373134328357No Hit
CACCGCACCTACGCAGGCGGCCAAGGAAAAGGTCACCCTGTGCTGCGGCA11.4925373134328357No Hit
TGCCTGCACCGTTCAGTGGCCGCAGCTGTCAGGGAAAGAGCTGGCGCAGA11.4925373134328357No Hit
GCCCACGAGTTTGGCGACGCACTGCCCGTGCATGACGGTGCGTCGGGCCT11.4925373134328357No Hit
GGCCAATCGACGGTGCCGCTGGTGAACGCCTGGTAGTTCTGGCCCAGCGT11.4925373134328357No Hit
GATGAGCAAACCGACAATCATTTTCTCCTCGGTTGCAATTGCCACGTTGG11.4925373134328357No Hit
GCTCAACCGCGTCGTGTCCCGCTCGATCGACGCGCAGAGCGTCCTCGGCG11.4925373134328357No Hit
GTGTGTTGAACAGCTCGACCCAGTCGTTGTCCACGATGCCGGCGCCCTTG11.4925373134328357No Hit
GTCCTGGCCCTCGGGCGTGCTGATGTCGACCGTGATCGAGCGCTTGTTGC11.4925373134328357No Hit
TTCCGCAGATCAACCGGCTGATGACGGCGTACGTGGCACGCGTGCTCGGC11.4925373134328357No Hit
CACGCTGGTGGCCGCACCAACCAGGCCCGTGGCCAGGCTCAGGCCGCCGA11.4925373134328357No Hit
CATCCGACCAGTTCAGGCGGGTGAACAGGCCCAGGTTTTCGCCCACTTTC11.4925373134328357No Hit
ACTCTGACGATTCTATCTTATCTTATGCTTAGAGATAAAATGGACCCTTC11.4925373134328357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)