FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003625542

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625542
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCTTGTGCTGCGGCGCCTGGGTCTGCACCGGCCGTCCCGACCTCAGCTT315.0No Hit
ATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAACTTTTCAGGCGAATTT210.0No Hit
ATCAACAACCGACTAATCACCACCCAACAATGACTAATCAAACTAACCTC15.0No Hit
GAGTACATGGGGTGGTGTTGGCGCTGTGCGCCGGCACCCTCGGCCTGAGC15.0No Hit
GGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGT15.0No Hit
AGCCTGGCCAACATGAAGAAATCCCGTCTCTACTAAAAATACAGAAATTA15.0No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC15.0No Hit
GATCAGGAGCACCAGAATTCCTATCCCCAGCAGAAGCTTACAGCGCTTAT15.0No Hit
GCCTGATCCCCAGTTCCTATACCCTACCCCTGACCTATTGAGCAGCCTCT15.0No Hit
TTTCATGTCCTTGCCTTAAAGAGCTCTCTAGTCTAACGGTCTTGTAGTTA15.0No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAA15.0No Hit
TGTATAGACAGTGCGCGTATCATATAGGATGCGGCGATCTCATACAGCGT15.0No Hit
CTGCAGGCCGGGGGCTCTTCCTCGGGCTGACAGCTGTCTCTTCTGCAGCT15.0No Hit
GCCATTGAGGGCCTGGATGGCCTTATGAGTCTCAGAGGCTATGGAAAACT15.0No Hit
GCTCTGGAAGGCGTGAGCCACTTCTTCCGCGAATTGGCCGAGGAGAAGCG15.0No Hit
ATGCAATATTACTCAGCTTTTTTTATTGTAAAAAGAAAAATCAACTCACT15.0No Hit
AAGTAGAATTATAAAGAAGATCATGTCCATGTTAACATTATTATAACCCT15.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)