FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003625777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGAACCACTTGATGCCCATCAGGTTCGCGATCTCCTTGATCGTGAAGCC77.608695652173914No Hit
GTTCACGATCTGGTCTTCGCAATACCGCAAAGCGGCCTGTGCCGCTTGCA55.434782608695652No Hit
GCCGTGGAAGGTGCCCGCCCAGGGCAGCGTGGTCTTGTACGACGTGCCGG33.260869565217391No Hit
CTCCAGCGCAATCGCCCGCGCCACCATCTGCGCGCTCAGGCGCTCGGCCG33.260869565217391No Hit
GATAAATCTTATCCTTTTATCTTCCTGAGTGGCGATACCCACCCGCGTCT22.1739130434782608No Hit
GCGCTCGCGGTCCCGCACGCCAAAGAGCGCCACGGCGCCGTTCGCATCGC22.1739130434782608No Hit
GGCTCACGATGACTCCCTTGACGACGACACCATTTCCGGGGGTAGTCCAC22.1739130434782608No Hit
TGCCTATCTAGATATTGGCGGAAACGAAATCGGTGATGCCGGCATGGCCT22.1739130434782608No Hit
GCGCTGTTGCTTGGGTTCGATGCCGTTGTGGGCGAGCGCGAGCGCGGCTC22.1739130434782608No Hit
CATCGTCGGGCTGGGCGAAATGGTGGTCGACATGGTGTGCGCCCAGATTG22.1739130434782608No Hit
GCACGGGGCAAATCGCGTACTTCGGCTTGGGGGAACTGCATGAAACCCAT22.1739130434782608No Hit
CGCGGCATTGCCGTGCCGGCGCAACTCCGCGTGGTCGGCTACGGCGACCA22.1739130434782608No Hit
CGGCCAAATGCATCGATAACTGGCACCAATGGATGAAACCGACCACGGTT22.1739130434782608No Hit
GGCCAGCACGGCGGCGGCCGTGGCGGCGAAGGTGTTCATGAAGGCCAGCG22.1739130434782608No Hit
GCCTACAACATCGCGCGCTTCACAGCCGACGATGATTGCGCCGGCTTGGC22.1739130434782608No Hit
TCATCAGGATGCGCCGAGCGGCGACATCGTCTTCGTCGCAATCGATGATC22.1739130434782608No Hit
GTTCACCATGCAGGGGGTGGAAGGCCAGATCTTCGGCCCGATGGCGCGTA22.1739130434782608No Hit
CCGGCACCCACCCCGGCGACGAGCGAGTAGAAGACGGAGTTTCGCAGCCA11.0869565217391304No Hit
GTACCTGTGCGAGTTTGAACTCTGGATGGATATGCTCCGCAACGAAACTG11.0869565217391304No Hit
GTACCGCTGGGTCGGGCCAGCCGCGCCGCGTCGGCCGTGGCCTGGCGCAG11.0869565217391304No Hit
ATTTCACCGCCCAGGCCGCCGAACGTGGGCGCTTCATGGGCGATCAACAA11.0869565217391304No Hit
TGTTTGAATAGAACATGACCTTGCCCTTGGGCACCGCGTCGGCAAAGGCG11.0869565217391304No Hit
CAAGGCAGCATCACTCCGGCGATGCTGAACTTCGTCAACCTCAGCGCCTT11.0869565217391304No Hit
ACTCGGGGGTTCTCGGACGTCTCGTCGCGGTGACCGGTACCGCGATGTTC11.0869565217391304No Hit
GGCTATCCCCGTCTTGGTTGCACGCGAAGGCATCGATCACCAGCTGGTAC11.0869565217391304No Hit
GGCCAGCTCCGGTTGCTTGAGCACGCCGAGGTAGCTGACGTTCGGGTACT11.0869565217391304No Hit
GAAGAACCCGGTCCCCTGAGCCTCCTGGGGTTGCCGCCTGGAAGGGGCGT11.0869565217391304No Hit
AGGTTGCGCTATCAAAACGCAAAAATGTTAACGAACTGGGATTTTAGTTA11.0869565217391304No Hit
TCTCCATCCCACGTTTTACCCTCAGCACTACGATATCGTGCTTTCGATGA11.0869565217391304No Hit
CACCAGCGCGCGCGCTTCGATGGCTTCGGCCACGGCAAACAGAAAGATCA11.0869565217391304No Hit
GCGCCCACGGCGTCAGCCAGGAGGTGCGCCGCGAGGCCGCCGCGCGCGGC11.0869565217391304No Hit
GAGGATGATGCCGACCAGCGGCTTGCCCTCGGCATCGACCGGCGGCTTGA11.0869565217391304No Hit
GTCATCATAACGAAAATCAAACCGTTCAGGTAAAGAAGTGAAAATATTTT11.0869565217391304No Hit
CGTCGCGACATTGTCCATTGCCTGATTGCCCCAGGCACACCGTTGTCGGA11.0869565217391304No Hit
GCCGTACGACGAGCTGGGCACGCATACCTACTCGCACCCTTTTGATTGGA11.0869565217391304No Hit
CGATCGAATAGTCGACTCGGAACTGGCCGCCGATCGGCAGTTCGGGACGA11.0869565217391304No Hit
GGCCAGCGACGCGGCGTACAGGTTGTTGGTGCCGCGAAAGAATGAAAACG11.0869565217391304No Hit
GGTTCTCGAACCAGCTGTGCGCCTTGTTGGTCGCCAGCGAGTTGACGGCG11.0869565217391304No Hit
GAGATGTACGCCCGCGGCCAGTCGCGGCAGGCGCGGGCGTACATCTCGGC11.0869565217391304No Hit
GCTGCTGACACTGTTATGGCAGGGATTTTATACTTTTGACGATTTCACCA11.0869565217391304No Hit
GCTGGGCCTTGAGCTGGTTGACCTTGGCGAGCGCGGCGGGGTTACCGAGG11.0869565217391304No Hit
GCCTATCTGCAGGTCGGCAGCGACAACTCGGTGGCCCGGCGGCTGTACGC11.0869565217391304No Hit
CNATCACCCGCGCCTACGGCACGGGCTTCGATCGCCGCCACCGACCGGGC11.0869565217391304No Hit
CAGGTGAGCTTTGGTTGGGACTGCAATATTCCCATCGACGATATGTGGCA11.0869565217391304No Hit
ACCCCGACGTGGTGGAAGAATGGAAATGGAGCGTGTCCGTGTGGTCGCAC11.0869565217391304No Hit
CGTCCGGACAGCCATAAGGTCCATACGCGTTTCAATCAGGCGCTGACCCA11.0869565217391304No Hit
CTTCAGCGCAAAGCCCAGGACCGCGGCCGTCGCCGGATCGGCGGACTCGC11.0869565217391304No Hit
GAGCAGGTGCTTGGGCATGGTGGCAAATTCTTGGGGCGGAGCCCGGGGGG11.0869565217391304No Hit
CGCCCATGCTGCCGCCCTGGAAGGCGCCTTCAATGGCAAGCACCACCGCC11.0869565217391304No Hit
GTGTTTCAGGAAACGGTCGCGGCGCTGACCACCGAGCTGGCTGCTGCGGG11.0869565217391304No Hit
GTACTGGGCATTCACCGGACTGCCAGCGTGGAAGAGGGCGCCAGGGTGCC11.0869565217391304No Hit
CGATGGGTCTGACCGGGGAGCGGCTGGAAGGTTTGCCATGTCCATCGATG11.0869565217391304No Hit
GGGTATAGGTCTTGGCGGCCTGGCCCTTGTCGCCCGAGGTGGCCTGGGTG11.0869565217391304No Hit
CGCTGCAGCCGCGCCGGCCGATGCGTCGGCGGATGCCGATGCCGCCAAGG11.0869565217391304No Hit
TACACCACCCGTGTGGGCAGCGGCCCATTCCCGACCGAGCTGGACTGGGA11.0869565217391304No Hit
CGACTACCCCGGCGCGCTGGAGCTGGCCTACAAGTTCCGCGAGGACGCGG11.0869565217391304No Hit
CTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATA11.0869565217391304No Hit
CGTTGGCCCACAGCGCGCCGGCGAAGACGTTGTGCTGCAGGCTGCGGTGC11.0869565217391304No Hit
ACGTAGTGGCCGACGCGTTGCGAGACGGCCGGCTGGTCGAGGTGAACAGC11.0869565217391304No Hit
CTTATTCATCAATAACTATGGTGAAAAGCACTATTAAAAAATACACGGCT11.0869565217391304No Hit
GTGCTGGGCACATCACGAGGTCAGGAGATCGAGACCATCCTGGCTAACAT11.0869565217391304No Hit
CCTGATCTGGCGCCGCCTGCTGACGATCTTCGTGACCTTCCAGACCGGCG11.0869565217391304No Hit
GCTTCCTGATAGCGGCGAATCCAGGAGGCCGGGTAGGTCGTGAAAATGTT11.0869565217391304No Hit
GTCCAGCGCATCGTAGAACGCCTCGTTCGCTTCGTCGAGCAGTCCTTTGA11.0869565217391304No Hit
CTATCACCCGCGCCTACGGCACGGGCTTCGATCGCCGCCACCGACCGGGC11.0869565217391304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)