FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003625778

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003625778
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCAAGATCGTCACGACGCTCTACTCCGACGACGACCACCTCTTCCCGG77.608695652173914No Hit
GACAGTGAACAACCTGCCCCGCCAGCCCAAAGAAGCTGGTGTGGTGCTGA55.434782608695652No Hit
GGCGGCCGTCGTGCAGGACATTGCCGCCGACCATGGCGGCGAGGCCTTCG33.260869565217391No Hit
GTTATTTTTTGTGACGCCCTGCCGTGCTTGCCGCCTCCCCCACCCCAGAC33.260869565217391No Hit
TGGCAGTGGGGCGCGCTGGACTTCGCCGGCGGTACCGTCGTGCACATCAA22.1739130434782608No Hit
ACTTGTCGGTGCTGCCGGGCCGCGGTGTGGCGGGCACGCTGGGCGGCGTG22.1739130434782608No Hit
GAGCAGCAGCAGATACGCCAGCGCCTGGCCACCAAAGCTGCCGCCGGTGG22.1739130434782608No Hit
GCAGCGCGACCTGGGCGGCGTTTTCCACGCCTTCCGCCACCACCCGCATG22.1739130434782608No Hit
GCGTAAGCACCTGATCATCTTTGCCAGACAAAAACAGGCGCACATACTCG22.1739130434782608No Hit
GATCAGCGCAAGCGGGTGCGGCGACAACAGCAGTTGATCGAGGCTGCCAT22.1739130434782608No Hit
AACCATCGCTGTTGCGGATCTTTGGGCTCACGGCAAAGGCAGCGGCTTCA22.1739130434782608No Hit
TCACGGCAATGCGCCGGTTGGACAAGGACCACGTCAGCGCAGGCTGGTAG22.1739130434782608No Hit
GTGCGATGGCGGCGGCGTGACCAGTTCGGATTACGCGCGCTTTCCGTTTG22.1739130434782608No Hit
ATCCAGCCAGGTAAGCGTTGTATTGATCTTTAGCGTCTCTGACAAAGCGA22.1739130434782608No Hit
GCCTATTGCCCGCTGCACGGTGCAGCGCCTGATGCGCAAGCTAGGGTTGG22.1739130434782608No Hit
ACTTGAGGTTGACCAGGTAGTTGAGGCGAACCCGGTTATCGAAAAAGTGG22.1739130434782608No Hit
ATGTAGCTCGCCCACATCGGCAACATTACCGCAATATAAAAAAACGCTTT11.0869565217391304No Hit
TGGCCGGTGTTGGCGTTGGCACTGGCTTCCATCGCATTGGCCGGCGGTCC11.0869565217391304No Hit
GGCGTGGGTGCTCCGGTACCAAGCACTTCACCGGCAGTTTGCGTCGCGCC11.0869565217391304No Hit
GGCGCTCGCCGAGCTGCTGGTGCGGACCCGTGCGCCGGTCGAGCGTGTCA11.0869565217391304No Hit
GCATTGATCCACCGCCCGCCGTCTGGCCCTCGCGCCCGGTCCCCTTTCGC11.0869565217391304No Hit
TCACCCATTCGCCGCCCTGCGGCCCGAAGTCGGGTGCAAAGCCGAAGCCA11.0869565217391304No Hit
GCCGTCGAACTGCTGAAGTCCTCCGGCGCGGACGAATGGCAGCGCGCCGC11.0869565217391304No Hit
ATTTTTAGTAGAGATGGGGTTTCACCACATTGGTCAGGCTGCTCTCGAAC11.0869565217391304No Hit
GCTCCTCAGCTCTGAGGCCACACAGTCCTGAGCTGATGGGCAGCAGGGCC11.0869565217391304No Hit
GTGCGCTGCTGGACGCCGTGCACGGCGCCTTCGGCGCCACGCCCAATATG11.0869565217391304No Hit
CGACACCCCGCTGTTTGACGAGAACGGCGACGGCAACACCGGCAACGACG11.0869565217391304No Hit
TCCCCGGGCTGCGCGCCGACTGGCAGAAGCTGCTCGCCTCGCTGCCGCGC11.0869565217391304No Hit
CGCTCGGCCAGCTCGCGCAGGCGGTTGCTGTTGGAACTGGTCGGGCTGCC11.0869565217391304No Hit
GTGCACGGCGGTCGCTCGGCGTGATGACGGCGGGGCGCTTTGCGCCGCGT11.0869565217391304No Hit
ACATTCTCAGCGGCCATCTGCTTCGCGATGTGGATGTCAATTGGGATAGT11.0869565217391304No Hit
CTTGGCGATGGCCGAAAGCGTATCGCCGCGCTCCACGGTGTGCCATTGCG11.0869565217391304No Hit
AGACCAGCATTCACGCGCGGGCTATCCAATCACGGCACGCGCTTTGCTAT11.0869565217391304No Hit
GGGCGGAAGCAGAGTCCCACCAGCCCAAGACCGCACAAGTCCCGTCCATC11.0869565217391304No Hit
TGCCCGAGGCGTAGCAGGCTCCCAAAGATAGTCCCCCGAAGGCCGCAGGT11.0869565217391304No Hit
CGGCAGGGGAGGCAAACCACAGTTCGGCCTCACCGGAGCCTCGATGCTGG11.0869565217391304No Hit
CTTCATAGGGTTCGTAACCGAGCCGCTGCCATCGCTCAACCATTTCATGC11.0869565217391304No Hit
ACCCAGCGCAATGCCGCCATGGTCGAAGAAAGCGCTGCTGCCGCCCAGGC11.0869565217391304No Hit
CTTCGTCGGCGCCGGCGTCACCTATGGCTATTTCTACAAGCCCAAGGCCA11.0869565217391304No Hit
GGCTTTCGGTAATCATGCTCGCCGCCCGACGCGCCACCGCGCACTCAATG11.0869565217391304No Hit
CCATTGTGTTCGGCGTCCTGTTTGCGGTGATCGCCATCAACCAGAGTTGA11.0869565217391304No Hit
CTTTCGGGCCACCACTCCACGCTGCTGCGCGACACCGTGCGCACGCTGTT11.0869565217391304No Hit
AAATTGTCCATAATATTACAATTATCCGCAGTGTTGCTTCTCGTCATCGC11.0869565217391304No Hit
GGACCGGGCGCGAGGGCCAGACGGCGGGCGGTGGATCAATGCCGTTCGCT11.0869565217391304No Hit
TCCCATAGCGGCTTGAGGGTGGGTTCGTTGCGGGCGGCCGCCAGGCCGTC11.0869565217391304No Hit
ATACCCAGGTTCTGGCTCAGGCCATAATCGCTAATACCATAAACGATACC11.0869565217391304No Hit
CTGTCACCTCGGTGATGGCGTGGTTGCTGTTCGGCGAGACCCTCGGCGCA11.0869565217391304No Hit
ACCATGTGGAAGGGGTCGCCGAGCTGCAGCGCTGGGTGGAGGTCCGCGCG11.0869565217391304No Hit
GCTGCTCTACCAACTGAGCTAACGCCCCGCGAAGAAACGAGACTATATCA11.0869565217391304No Hit
ATCTAACACCACTCAGAGTCGCCGGAAGCGTTGTTCGCGCACACCGCCGG11.0869565217391304No Hit
TTTTCGTTCACCTTGTCGCCCTCGCGGAAGTCGATGGCGCGGCGCGTGTT11.0869565217391304No Hit
GCATTGATCCACCGCCCGCCGTCTGGCCCTCGCCCCCCCACCCCGTTCGC11.0869565217391304No Hit
GACCTGGCCTTGCGGGTGGTAGACGAAGGTGCCAAACAGGTGGTCCCACA11.0869565217391304No Hit
CTCGAAGCGCTCGCGCAATCTTGAGGAGAAGCCATGTCACGCAACCCGAT11.0869565217391304No Hit
CCACTCCACGTACTTCAACGAGGCCGAGACCATGCATGAAACCACCCGTA11.0869565217391304No Hit
GGATGGACAGAGCATCGTCTATGCGTGGGCACCGTCGTCTGCTGACAAAG11.0869565217391304No Hit
TCCCAGCCGGGGAAGGTTTCATAGATCGGTTCACAGGCGATGATCTCGTC11.0869565217391304No Hit
GGCTTTCTGCTGAACGTCAACATCCCCAACCGGGCCGATGCCGACAAGCT11.0869565217391304No Hit
GCGACAGTGTCCTCGACCGGAAACGCTCTCGTCGCATGCGACTTGAATGC11.0869565217391304No Hit
AACATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAAT11.0869565217391304No Hit
TTCGAGGGCCTGCTGACTGCAGGCTCACATGCTGAGATCGCAGCCTTCTT11.0869565217391304No Hit
ACGGCGTGCTGTGGACGCGCGGCGTGGATCTGGACATCTTCACCGCCCAG11.0869565217391304No Hit
GCAGATCGAAGCACAGGAAATCAAGCCGCCGGTCGATGCCGAGGGCAAGC11.0869565217391304No Hit
GATCGCTGGCGTCGGCACTAAAACTCACATCAGCTTGCGCGTTCTGGCTG11.0869565217391304No Hit
NGACCAGCATTCACGCGCGGGCTATCCAATCACGGCACGCGCTTTGCTAT11.0869565217391304No Hit
CTGGCAAGTACATAAAAAATATACGATTCAGACATTCTTAATGAGGATGT11.0869565217391304No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)