FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACTCGATCCCCAGCCGACGCACGCCCGGCGTGAGCTGACGCACGGCGCG320.0No Hit
CTGGCACAGGATCGGCGGGTCCTGCGCCCGCGCGAACCGGACGATGTCGT213.333333333333334No Hit
GGCCATCCAGTCGCGTTCTACCACGTGAAGCTGCTACTGGAGCTGTCTCT16.666666666666667No Hit
CTACGCCTATGGCCGCACCACGCCGACCGACTTCTCCGATGGCGCGCTGG16.666666666666667No Hit
TCAGGATGCCGTACCGCGCGTGTACGATGCTCTTGAGGTGCAAAATGGTA16.666666666666667No Hit
TTCTTGTTCATGACAGGATCTCCTTGGCGACCAGCGCCGGTTCGTCGGAT16.666666666666667No Hit
AAACACGTCTAATGCAGTGCATGCATTCTGATCGGAAGTTCGAATACATC16.666666666666667No Hit
TCGCCACCTGGACGCGCCAACACCTGGTCATGTTCGAGACAGCTTAAAAT16.666666666666667No Hit
GGATCGAGGCGCGGATCGGGGTGCGGCTGATCGAGCGATCGACGCGGCGA16.666666666666667No Hit
TGCTGACGTAGGCGAGGTCGAGCGGTGCGAGGGCGTCGATCAGGATGCCG16.666666666666667No Hit
TTATCGGACCCATGCCCATGATGCGCGGGTCGATGCCCTCGCTGGCGTAA16.666666666666667No Hit
GGGGCTGCGTCTGCCGATAACAGCAGGCCAGTTTTACGGTGTCTGGCAGC16.666666666666667No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)