FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626251

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626251
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTA29.090909090909092No Hit
GTTCCTACCCACCCGGCTGACAAGGGGTGGCCCCAGGGGCCGGATGCCCA29.090909090909092No Hit
CTCCTCACATTATGCTAACAGGGACGCAGACACATTCAGGTGCCTTTGCA29.090909090909092No Hit
GCTAATAGCTGTTTAATGGAAACCTGCTGGGCTGGAGGGAGTTAGGCTGA29.090909090909092No Hit
TACATGGCCTTTGTTCAGTTTCTGCAAGAGAAGAGTCGGAAGAGGTGTGG14.545454545454546No Hit
CTTCTCATACTTGGCAATGTCACTCATATTACTAGTGATCACCTCTGGGA14.545454545454546No Hit
CCCTAAATGTCCACCTTTCAGTGAAGAGATAGTTAAGCCAATTCCATTTA14.545454545454546No Hit
ATCCATGCTAAATTCCCCATCCTGCAGCAGTGAGTCCCGGATCACCGAAC14.545454545454546No Hit
GCCTAGGATTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT14.545454545454546No Hit
GAATGCAGCAATCAATGTCGTCGGAAGATCCTGAATAAATCCTACTGTAT14.545454545454546No Hit
CTGTAATAGTCACCATTTCCTGTTAAAACAGTGATGATTGAGTCATCCTT14.545454545454546No Hit
TCTTCTGAGGGTCCGCTGCTGGCAGTACCGCCAGCTCTCTGCTCTCCACA14.545454545454546No Hit
CTCATACTGACGGCAGCAGGCTTCTCTGAAGTCCGTCACGGGTGACAGCT14.545454545454546No Hit
CTGAGCTTGTGGAGACCAGACCAGCAGGAGATAGAACCTTCCAGAAGTGG14.545454545454546No Hit
CTCCAGCCGCAGCTCAGCTGCACTGCGTTCCGAGGTGAAGTCTTGCCCCT14.545454545454546No Hit
GAACAGGAGCCGACCCAGCAGTTTATCCCTGTGAAAAGACCCATCCCCCA14.545454545454546No Hit
GCCCAGGCCCAGAGCGATTGCAGTTGCTCTACGGTGAGCCCGGGCGTGCT14.545454545454546No Hit
GGAGTAATGAGAGATTGGGCAGAGGGTAAGGGACAGCAGGGAGACGGAGG14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)