FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCACCCGGCCCGGACA29.090909090909092No Hit
CTTTCAGCTAACTTATTCTACTCCGATGATCGGCTGAATGTAACAGAGGA29.090909090909092No Hit
CAGTTACACGCAGGGGTGTGCAGACGCAATGGGGGCAGGGCTGGTGCAGG29.090909090909092No Hit
GTCCTAGCAGTTGTGGTCATCGGAGCTGTGGTCGCTGCTGTGATGTGTAG29.090909090909092No Hit
GCCCCACAGTGGCGTCCAGCTCGCTCCTCTGCAACGGACTGAAGGCTTCG14.545454545454546No Hit
GTGTGGCCCCACAGCACCAGTTATTGATAAAAAGAGCTCCCCTTTGCTGA14.545454545454546No Hit
ACCATAATTACCCCCATACTCCTTACACTATTCCTCATCACCCAACTAAA14.545454545454546No Hit
GTACATGGGACAGCGAGCGGAGCCGCGGTTCGGACGGCAGCGCGTGCCCC14.545454545454546No Hit
TATTCAAGTCAACCAGTGTTAACCCCGGTGTGCTTCCAGCCAGTCTGTTC14.545454545454546No Hit
GGACAGTGCTCTCACAGAGACAACCAATGAAGAGCATTTTGTAGGGCAGA14.545454545454546No Hit
GCAATATGCACTGCCGCGTCTGACGGGACAAGGGATCAACCTTTCCCGGC14.545454545454546No Hit
CTTGTAGTGTGTGTGAGTGTTTTCCCAGGGGGGCCGTCTGCCCCCAGCCG14.545454545454546No Hit
GTCATGGAGACAGGTGCTCTCGGTTGCACAATAAACCGACGTTTAGCCAG14.545454545454546No Hit
GAGAATACCTTGGGCTACGTCCTTACACACGAGGGGCCCCCCGGAGTCCC14.545454545454546No Hit
GGCGTGAAGAAATCCTGCATCTCAGTCCCTCACAAGACAGCTGTCTCAGG14.545454545454546No Hit
GGCTGGATCCAGGTATCACGTTGCTGACTGTCATGATTCGGGCTCATTTG14.545454545454546No Hit
GTCATAAAGGATTTCATGATTCAGGGTGGAGATTTTGTTAATGGAGATGG14.545454545454546No Hit
CTATATAAGCAGGCCACTGAAGGACCTTGTAACATGCCCAAACCAGGTGT14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)