FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626297

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626297
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCACGATCAGGCCGAACAAGGTGATTTGCTCAAAGGCCACGACCTGGCC34.225352112676056No Hit
GGAATGAGGTTCAAACTATTGGAAGTCGTGCTCTCGCCGTAGGACATGTT34.225352112676056No Hit
TCCTTCAACTTGGCCACCAGCTGCTTGGCCTGCTTCTGCTCGATGCCCTG34.225352112676056No Hit
CTTCCTCACGGCCGCGCAGTCCATGTTCGGCGTGGCTTTGCTGCTGCGTC22.8169014084507045No Hit
GTCCCACCCCGGCACGTAATTGGAGTCGAAACCGAGCATCTGCTGGCTCT22.8169014084507045No Hit
GCCGCGCGCCGGCAGCGGAGGTGGAAGATGTCGGACCGACTGCCGTGGCC22.8169014084507045No Hit
ATTTCAACTTTGGGATAAGCTTTTAGAAAATGATTGATCAATTCTCGAAT22.8169014084507045No Hit
GTATTATCTCATGGTGTCTGAGAGTCAAGAATTTGGATGCAGCTCAGCTG22.8169014084507045No Hit
GAAAGATGGCCAACCACAGCTGGAGTGAAACTTCTGGGTAGAGCGGAACA22.8169014084507045No Hit
GGTACCGCATCACGGCCACCAACGGCACGGCACCGGTCTCGTCGACGACC22.8169014084507045No Hit
CCCACATGCTCGGCCGCGGCGATGGCCGCCAGCGCGTTGAGCTGGTTGTG22.8169014084507045No Hit
CTTCTGGTATGGCTGCCCGCACTGCTATGCCCTGGACCCGTCGCTCGAAG22.8169014084507045No Hit
GGTATGTGGATTATAGACGCGGAAAATCGTCACGCCGTGGGAGATCCATA22.8169014084507045No Hit
CCCCATGTTTGCGCTGTTGCGCGCGTACCCGACCATCGGTGCGCTGCTGG22.8169014084507045No Hit
TTCCAGTAGAGAATGTCGAAAGCAGGGGGCGTTTTGCCCAGCAGGTAATT22.8169014084507045No Hit
GGAGAATGCGCCGATCTTGGGCGTGCCGTCGGTGCCGAGCTTGACAGTCC22.8169014084507045No Hit
TCTCCTGCGAGCTGCCGCCGTCCACGCCGATGTATGCGCCGGAGAGCAGC11.4084507042253522No Hit
TACTGCAACCTGGTCTCATATGAGGATGTTTGATCATCTTCAGCAGAATT11.4084507042253522No Hit
AAATAAAGGTCTCTCCGGTAAGGGCTGATGAATTCGGCAAAATGTCGCGC11.4084507042253522No Hit
CCGCAAGAAGGCGCTGTACCAAAAGCGCTAACTTCCGCATGCTCAAGATT11.4084507042253522No Hit
GGATGTACTGGTAGTTGAAGAAGGCGAAGGTCTCGGTGTCGAGCGCGAAG11.4084507042253522No Hit
GAAACTGATCGGATCGCACGCCAGCCCGTACACCCGCAAGGTGCGCGTCG11.4084507042253522No Hit
TCCTGCGCCTGGGCTATCTGGCCGAGGCGCTGGAGCGGCTGCTGGGCGTG11.4084507042253522No Hit
CNTCGTGCCGGTGTTCGCCGTGATCCTCGTGGACTACGTGCTCCAGGGCC11.4084507042253522No Hit
GGATATTGCTGCTAGCAGCGGTTTGCCTAATCGGCTACGAGGCAATGTGG11.4084507042253522No Hit
GCTTCGCAACCTCGTCGACGTCAGGGCCGTGCTCTCCTAGTTCCACCGGG11.4084507042253522No Hit
ATTTCAAGGCCGCTGCGGATGCGCTGGCAGAGGCGGCGATGGCGAAGACG11.4084507042253522No Hit
TCCTGCGCCTGGGCTATCTGGCCGAGGCGCTGGCGCGGCTGCTGGGCGTG11.4084507042253522No Hit
GGCCATCGCCGGGCCCAGCGCGCCGGCTGGGACAGGCAGGACGGCGCCCC11.4084507042253522No Hit
ACGTAGATCATGTTGGCGAAGGGCACGCGGCGCTCGTCCTCGGCAATCGA11.4084507042253522No Hit
TCGTGCTGCCCAACGTGCAACCCGGCATCCTGGCCGGCGCGCTGACGGTG11.4084507042253522No Hit
CCTGAAGCAATGTCGGTCGCTCGGTCTGAAGGCGACGGACTACCCGATCT11.4084507042253522No Hit
ATGCGCGACGGCCGCCTTCCTCGCGGCCACAGACTTCGCGCGTGCGGATG11.4084507042253522No Hit
GTGCATCGGCAGCTTCCTCAACGTCGTCATTCACCGCCTGCCACGCATGA11.4084507042253522No Hit
AGTGGGTGCTCCATGGTCTCCAGACCGAGCGAACCGATCTGAAGCGACGC11.4084507042253522No Hit
CCCAACGGTTCCCGGGCTCGTCGAACCATAGCCACATCCACGCCATATTC11.4084507042253522No Hit
GGAGTTGCCTCGGCTCAGCTGTCGCAAAGCGCCGGATCGCTGTCAGCAGA11.4084507042253522No Hit
GTCCCAGGGTTTTCAAACGCTCGCGAACTGCAAGAGCGCCCTCGATCACG11.4084507042253522No Hit
GTTGTTGAGTACGTCGGAATCACGCTCAGCACGCCAAGCGACGCGACCGA11.4084507042253522No Hit
GTCCGCCATCACGCCGCCCACCAGGCCGCCGATCCCCCAGCCGAGCAGAG11.4084507042253522No Hit
CGAGTACATGGGCATCGGTGTGCCGAAGGGTGAAACGAAGCTGACGGCCA11.4084507042253522No Hit
GAATGGCATCACGGCGGCGATGACGAAGAATGCCGCGCCGATCGCGTAAC11.4084507042253522No Hit
GGCGGCCTCTGCATCGATGTGGAATGGCTGCGGATCGTACTGCCGCGCGA11.4084507042253522No Hit
GCTTCCAGCCCATCGATCCGTCCCAACAACGCGGAAAACGCGCGCGCCAG11.4084507042253522No Hit
GCTGGGGCTGATCGAGCCGCCGCTGCCCGAAAACAGCGTCACCGACCTGG11.4084507042253522No Hit
GGTCAAGGTGGTGCAGGCCTGCATCGACCGCGACATCGAACACCTCACCG11.4084507042253522No Hit
TTTGAGGACGGTGAGGACGCGGCGCTGCCCGCCGTGGTTGCGCTGGCGGC11.4084507042253522No Hit
GGTGTGCGCCTGTAGGCCCAGCTACTCAGCAGGCTGAGGCAGGAGAATCG11.4084507042253522No Hit
GTCGGTGCGTGGCAGGGTTTCGGGATGATAGGCGAGTTGTTAACGCGATG11.4084507042253522No Hit
TCACGCAACAACGGCACCAGCCCGTTAGGGTTCATCGCCAGAAAATCAGC11.4084507042253522No Hit
ACCAGATACCGTACGCATTATGCTCAGTCCTCATTTTGCTCGGCAGTTCG11.4084507042253522No Hit
ATGCGCTGCTGTAAGGTCTTGGCGTCGAGCTCGTCATCGCCCAGGTGCAG11.4084507042253522No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)