FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626298

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626298
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCCTCTTCGGGCATCGGCAAGAAGCGCCCGCAATGGCTGATGACCGCT34.225352112676056No Hit
GAGTAACCTCGGTAGGAATAGAGACAATTAGAGGACTTTTTCTAGTGTCG34.225352112676056No Hit
CCCCTGAACAGTGGCACGAGCGTCTAAGCGACGAGGAATACTACGTGTTG22.8169014084507045No Hit
CGGCGATCCCCAGGCCTTCGACGTGCTGCGCGGCAGCCTGAAGCTGGCGC22.8169014084507045No Hit
GGGATGTCCTCGCCGGCCAGCCCGCGCGGGTAGCCCGTGTCGTCCCAGCG22.8169014084507045No Hit
GGCGTGGAAGCCAAGTTCGAACTGGAAGACGGCAAGGTGATCAACCAGTC22.8169014084507045No Hit
CTCGTAAAAAGCGTGAAAAAGGGGTGTGACGCTCCGTAAAGAAAGTGTAA22.8169014084507045No Hit
CGCTGCAGGGCCACCTGCAAGCCAAGCACCAACTGCGCCGGGTGCGCAGC22.8169014084507045No Hit
ATGTTGAAGGACTCGCTGAGCTTGGTGGCCTGCTGGGACTTGGTACGCAC22.8169014084507045No Hit
GTCCGCCACCTTCGACGTCGCCAGGACGCGCACCGAGTACGCGGCGATCG22.8169014084507045No Hit
CTTGAAGCCATAGGTGCCCGAGTTGGCGATGTTGTTGCCGATGACGTCGA22.8169014084507045No Hit
ATTCCAAGACCCTTTACCTGCCGAAGACGGAATTCCAGATGCGCGCCGGC22.8169014084507045No Hit
CTCATGAGGAACTGAATCCTGCCAACAACCACATGAGGGAGCTTGGAAGA22.8169014084507045No Hit
ATTGGTCGGCGGGTTAGAACGGCGGGCTGGTCCCGGCGATGTAGGAAAGG22.8169014084507045No Hit
AGATACAACCACCCCACCATCGTCAGCGATTCGATGGTCCGCGCCGCGTC22.8169014084507045No Hit
GCTTGAGGATAAATTCAATGTGAATTTAATCCAGCGAACGACGCGACATT22.8169014084507045No Hit
TGACGCTGCAGCACCGCAGCGCCATCGCCGCATTCGAGCAGGCGCGCCGC11.4084507042253522No Hit
GCTTAAAAGTTAACTTTACTTCACCATCGGAGTCCTGTTCAGCCTGTGGC11.4084507042253522No Hit
AGGTTGAACTCGCCCACCGAGAGCGTCACCACCGTCAGCGCGCCGGCCAG11.4084507042253522No Hit
GGGGTAAAGCAGTAATACAGGAGAACTTTGCCAATAGTCACGCCCCAATC11.4084507042253522No Hit
GGCGTGGAAGCCCAGTTCGAACTGGAAGACGGCAAGGTGATCAACCAGTC11.4084507042253522No Hit
CCGCAAGGGCAAGGACAACACCCTGACACCAGGTCCGGACGATCCGGGAT11.4084507042253522No Hit
TTCCAGGCCTGCAGCTCGCCGCGGTCGACCATCAGCTGGACCGAGCGGAC11.4084507042253522No Hit
GCATACATGGACACCAGTTTACTGGCATGCAATGTATGTCGAAGATTAGC11.4084507042253522No Hit
GGTCATTGCGGAAGTCATCTACGCCATCGATAACACCACCAAGACGCGTG11.4084507042253522No Hit
GGATAGCGCAGGCCGATGGGCGCCTTGCAGGCCGAGCAACGCCCGCCCAG11.4084507042253522No Hit
TGCTCGACCAAATACTCAGCCATTGCTTCACGCATCGGGACGTCGATCGA11.4084507042253522No Hit
GCCTCGTCCTCATCGAGGCCGCCGTCGGCATGATCGCCGAGATGCTGCCG11.4084507042253522No Hit
GTAGAGGTAGAGTCCGTAACTGATTTTGCCGAGCTGCCTCAGCGGTGCCC11.4084507042253522No Hit
GTGGTATTCCGGGTGCTCGGCGATCCAGTCCGCGGCCAGGGCCTCCATCG11.4084507042253522No Hit
GTAGTGGAGCAATGCTTCGCGCCTGGCCAGCAGATGCGCCGTGTCGCTCT11.4084507042253522No Hit
NGGCGGGCCTCCGGCCGATGACGCGGCCAGGCGAGCAGGGCGTAGAGCAG11.4084507042253522No Hit
AGATAACGCGGCGGCAGGGGCTGGAAGACGGCCGGCAGGCTCAAGCTCAC11.4084507042253522No Hit
CTTCAGGGCCGATGGAACGAAGCGAATAGCACTGGGTCTTTGGCGCACCC11.4084507042253522No Hit
CTCCTGGCCGTGCTGTTCCTGTGGCATCGCGGCAAGAACCTGTTGCCCAC11.4084507042253522No Hit
CATCACAACCTTTCCAGCCTCAGGAAACAGCCATCATATCGCCCCATGTC11.4084507042253522No Hit
CTGCATACTGGCGCGAACACGGCGCCATGCTGCCCTCGTCGTCGGATTGC11.4084507042253522No Hit
CATCTGCGAGCATCTAGGCATTGACATGATCCCGGTGGAACTAGGAGAGC11.4084507042253522No Hit
GTCGGACTGCGACAGCGTGGTCGACGGCGCGGGGCGCGTGAAGACGGCCA11.4084507042253522No Hit
CCCATCTTGGCGAGGTAGCGGCTGACAGCAGCCAGCACCAGGCCCATCAG11.4084507042253522No Hit
TCGATGCGCAGCATGAGCGCGGCGTCGAGCAGGCCGTCGGCCAGCGCTTC11.4084507042253522No Hit
GTGTCGCCGCCCAGCTCGCTGCGGCCTTCTGATCTGTCGCTGCTTGTATC11.4084507042253522No Hit
ACCAGCAGCCAGATGCGCTCCATTTCGAACTCGTGCTCAAAACCCAAAGG11.4084507042253522No Hit
CTTCACATCGCTGCCCGGCTTCCAGCAGGCGGCGTAACGGCAAACCTGAA11.4084507042253522No Hit
CCGCAAGGGCAAGGACAACACCCTGACCCCAGGTCCGGACGATCCGGGAT11.4084507042253522No Hit
CGCTGGAAGCGTCCATGCGCCGTGCGCAGGAAGCGCTGTCTGCGGTCTCG11.4084507042253522No Hit
CATCAACATGACGCCGCTGATCGACGTGATGCTGGTGCTGCTGGTGATCT11.4084507042253522No Hit
GTGCCACGCGGCGCGCGGCAGCGGGCAGGCCGCGACGGACCGCCTGGGCC11.4084507042253522No Hit
ATGGCTGAGGCTGGAGGCCGATCCCGACGTTCAGCGTTTTTGCGAAAGGC11.4084507042253522No Hit
GGGCTGGGCCCTGTTTTTTCTTTTACAAGTGGTTAGCAAATGGCAAACTT11.4084507042253522No Hit
GGTGTCGGCCCGTTTGCCGCCGTGGTGGTACTGACCATGTTCGCCGCCCG11.4084507042253522No Hit
GCTGTGGGACTTTCTCAGCAACGCGCCGGTCGATGAAGCGGCAGAGGAAG11.4084507042253522No Hit
GATGCATGTCTGGGGCGCAACCCTTGCCGATCTCGAGCGCCCCGACCGCC11.4084507042253522No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)