FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626307

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626307
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACAAAACACAGGGATGTGGCCCCTGCGGCACCACCCGATGCCAGATTC218.181818181818183No Hit
CTACAAGAAATTCTATGAGCAGTTCTCTAAAAACATAAAGCTTGGAATAC19.090909090909092No Hit
GTCCAGGATCGAAGCAGTGTGGTTGTTTTTCGGGTAATTCTCCATCTGCT19.090909090909092No Hit
CCCATACTCCTTCATCCGGTCACATATCTCCTCCAGCAGCTCTGTGAGGT19.090909090909092No Hit
AGAAAAGACAGTAGCTTATGTTCATGGCAAGCACCTCTCATCACAGTCCA19.090909090909092No Hit
GTTCAAATGTGCAGGGCTGAAGCTTCCAAACACAGCCACTATTTTCTGTT19.090909090909092No Hit
CCCTTAGACGTCTTGGTATACGGACAACTGATGGACCCACGTTGCGAGTC19.090909090909092No Hit
CTCGTAGTAACAGCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGC19.090909090909092No Hit
GCATACACGGCATCGAATAGCCCAAGGAGGGTGACGGAGATGCCCACAGC19.090909090909092No Hit
AGAGAAAGCAGCGAGGCTAGGAAAGGTTTCTCCTATTTGGTAACTGGAGT19.090909090909092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)