FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626559

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626559
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136
Sequences flagged as poor quality0
Sequence length100
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTA32.2058823529411766No Hit
GCAGAGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA32.2058823529411766No Hit
GTCGATCATTTATAATTATAATGCATATTGCATCTGTGTATTTCAGTCAT21.4705882352941175No Hit
GGCTTGCTGTGAGTCTTACATAAAAACAATTCCTGCAAAACAGCCTGTTC21.4705882352941175No Hit
GACCATTCTTAGCTCATAGGCTATAGAAACCCAATGAGCTGGGTTCAGCT21.4705882352941175No Hit
GCTTCTCTTTAGGTTTACCATCCTCTTCCTGTGAGCCGCTGTTCCTCAGC21.4705882352941175No Hit
ATGCAGGAACTGCTGCTCACTCGCTAATTATCCCACAGCCTCGCAAGATG21.4705882352941175No Hit
TACCACTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC21.4705882352941175Clontech Universal Primer Mix Long (96% over 26bp)
AAAAAAAACTGGGTAGGCTGAAAAGTTAGTGCCTGTAGTGACTGATAGAC21.4705882352941175No Hit
CTAGAGTGGAGGTATGCCTTCTGGACCTACTGGGGTGGCTGTCTTTCCCC21.4705882352941175No Hit
AAATTGTATAAAACTCTTTGGTTCTCTTACTTACTATAATAGATGGTAGA21.4705882352941175No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC21.4705882352941175Clontech Universal Primer Mix Long (96% over 26bp)
GTTGAAGGGCGAGCCCTTGGCGATGTTGTCGCTGGTGTAGTTGCGTGCCA21.4705882352941175No Hit
GGCATGATTACGGCCCACTGCCCCCTCAACCTTCCAGGAATGCTTGAGCA21.4705882352941175No Hit
CATAGGCTCCCACACAGTAATAGTGGGAGACTTCAGCAGTCCACTGACAG10.7352941176470588No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTCCGTTT10.7352941176470588No Hit
AACACATCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACC10.7352941176470588No Hit
CCCGACCCCGATGGATGTCAGCAGCAGCGCCAGGCCCTTGCGCCTGAGCA10.7352941176470588No Hit
GAACAGCATGGGGGAAACTGCTCTCATAATCCAATGACCTCCCACCAGGC10.7352941176470588No Hit
CTCCAATTTTAGTTCATCCTGACGACCTCACAGTGGAGGACCTTCCTATA10.7352941176470588No Hit
AATAAATTGCAAACTCATTAACAAGAAATGGGGGTGCCTGCATCCCTGCC10.7352941176470588No Hit
TTTTTGTCGTTGGTTCTGTTTATGTGACGGATTACGTTTATTGATTTGCG10.7352941176470588No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTCGTTGTTA10.7352941176470588No Hit
ATATCAGGCAGCTCAAAGAAATATGGGACTCTTGGAGAACCTGACTGGGA10.7352941176470588No Hit
TTCACCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTGGCAATCCACC10.7352941176470588No Hit
TCTACTTAAAATCTAGCCTCACCAAAATGAACAATGTTCTTAATTATAGT10.7352941176470588No Hit
GTCCAGACAGGTGGATGTTCAGCAGCCCGTCCAAAGGGATGCTCCAAGCG10.7352941176470588No Hit
GCGGGTGGGCCGCCCTGTGGCGTTGGGCCGTCGTCTGGGGCAGTTTACCC10.7352941176470588No Hit
CTTACATATATATTCTTTCAAACTATTACTGCTCATTCATTAAGAGCTTT10.7352941176470588No Hit
CGACCACCCACACCGGTGCCTTTAATGGCGCTGGAGTCGAGATTGTGTTC10.7352941176470588No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7352941176470588No Hit
GGCTGGCAGGGAATGGGGCAATCTATTCATACTGATTGCAATGCCCACTG10.7352941176470588No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGT10.7352941176470588Clontech Universal Primer Mix Long (96% over 26bp)
AACTTTCAGAGGAAACACAAGGGAAACCTTCATGACCTGAGGTTAGGCAA10.7352941176470588No Hit
GTATCAACGCAGAGTACATGGGTTTCATCAAAAAAAAAAAAAAAAAAAAA10.7352941176470588No Hit
GATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATG10.7352941176470588No Hit
ATACTATGCCATCCAGTTTGTGTTCTTTTCAGGGTAAACTATTAAACTGC10.7352941176470588No Hit
GCCTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAGGCGGG10.7352941176470588No Hit
CTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTCCT10.7352941176470588No Hit
GTTTTAGAAGCAGTCTTCAAAGAATAAAACACTAACCATGCATGTGAAAA10.7352941176470588No Hit
CCGGCCGGGGCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAAT10.7352941176470588No Hit
TCCTCTGTCTTATCCCTCATATCATATCCCCAAACATCACCAAGCCCTGC10.7352941176470588No Hit
GGACTGGGCGCAGGCCCGCACTGTCTGCAGCTCCAGGATACTCCGCGGCC10.7352941176470588No Hit
GGCCCGCATCTGCTGCCCAGCAACGAGTGCGTGGAGCTCTTCAGAACCGC10.7352941176470588No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGCTGTCTCTTAT10.7352941176470588Clontech Universal Primer Mix Long (96% over 26bp)
GTTCAGCAGCTATTCTATCAATAGAATGGGTTCTTCTTCTCTTCTAGCTA10.7352941176470588No Hit
TCCGCCGGCAAGCGAACGTTGGCCTCAGCGGCAACTGTGGAGCGATCACG10.7352941176470588No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTT10.7352941176470588No Hit
CACTCAGAGAGGACTATTAGCCTGAGTTGCCATATGTATTAACACAGGAC10.7352941176470588No Hit
GAGATCATGAGTGCATTTTACCAAGAATGATTTAGAAGGATGGATGTCAT10.7352941176470588No Hit
GGGTTAGGCTGCTTGCGGTGGATCACGCCTGTAATCCCAGCACTTTGGGA10.7352941176470588No Hit
CATACAGTGATGGCAATGCTTTCTGCAACATATGGAAAAATAAATATTTT10.7352941176470588No Hit
GGTCCAGGCCGGCAGCGATCGCGTACTGAGCGCGATGAAGCGCGGCTACA10.7352941176470588No Hit
GTGTGAAACTAATACAAAAATTAAAAGACCCAGAACCTAATCTGTAGCTC10.7352941176470588No Hit
AAACTGACCCTCAACCTATATTAGTCATTCTTCACTGCATGACAAATTAC10.7352941176470588No Hit
ACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGCTGCACC10.7352941176470588No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA10.7352941176470588No Hit
GGAAAATATCACTATCTTAAATATATATGCATTTAACACTGGAGCTCCCA10.7352941176470588No Hit
GATAGGTATTGCGGAGTTTGCCGCCTCCCTGGAAGTCCCCGTTTCTGACT10.7352941176470588No Hit
GTACAGAGAAGCACCTATTGACAAAAAGGGGAATTTCAATTACATCGAGT10.7352941176470588No Hit
CTGTAGCAGTCACCATTTTAAGGTGTACAATTCAGTGCTTTTAAGTCTAT10.7352941176470588No Hit
CAGTCTGTCTTTAGCTCCTTTCCATTCTGGCCTTCTCCCTTTCCTTTGTC10.7352941176470588No Hit
GGTATAGACGGCAAGAAGGGTCCAGCTTTGAGCCTCATGTGAGTCACGTG10.7352941176470588No Hit
GCACAGTTCCAGTTTCTGCCACGGAAACACTGACCATGTGTTGCTCTTAA10.7352941176470588No Hit
GTGCCTCTGGGGAGTCTGGACATCTCAAAAGTTAGGGATTTTTGCGATAA10.7352941176470588No Hit
GGAGAATGGGACCTAGAACACAAGCGGAGAGTTCAAGGAGTATAGACATA10.7352941176470588No Hit
TCCCCTAGGAGAACAGTGAGGCAGAAAAGGCAGAAGCCTTTGGTATGGGG10.7352941176470588No Hit
CTGTTAGATCATTCCATTTGATTCCATTCAATGATGATTCCATTTGATGA10.7352941176470588No Hit
GGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCATGATC10.7352941176470588No Hit
ATCACACGGCGTATCGGATCACCCAAGAAGCCTTGACCAACGCACTCAAG10.7352941176470588No Hit
ATTAGGAACTTCCAGCACTACTCCAGCATCCTTGGGTATGGTTGTAATAA10.7352941176470588No Hit
GTGTGAAGGTATGCTCAGTGGTGAACACGATGAGTCTACTTGCTTCATTA10.7352941176470588No Hit
GCGGCAGCTTCACCTCCTTCGCAACCACGCGCTGCATGTCCTGCACGGCC10.7352941176470588No Hit
CGACCACCCACACCGGTGCCTTTAATGGCGCTGGCGTCGAGATTGTGTTC10.7352941176470588No Hit
GGGCTGTTTTCCTGATCTTACCTGGCATTTTTATGTGTCTGAAGTGATCA10.7352941176470588No Hit
CTCCACCGAAGATCTATCTGGATCTTTCTGGGGGTGATAGCAATTTAAAG10.7352941176470588No Hit
CAGTTAAATTTATCACTCATAATAGAGTCCCCAAAATTTCAAATTCAAGG10.7352941176470588No Hit
GCTGGTGATCGTGCCGCTGCTGGCGGTGGTGTTCGGCGTGCTCTACCAGC10.7352941176470588No Hit
ATTAGAACTGTTGTTAATATATCAACATACTTTATTCTAGAGACAAATAC10.7352941176470588No Hit
GACTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTAGCACGATCTCAGCTC10.7352941176470588No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTT10.7352941176470588No Hit
GTGGATATGATTGCATTTTGAGATAACTGGTTTCCATGTAATCCCTGTCT10.7352941176470588No Hit
ATTATGACCCTGAAGAGATAGATATTGAGAAAAAAAAAAATCACAAGCTT10.7352941176470588No Hit
GATTATTCTTAGATGTAATAGTATGTGGTATGCTTTAGAAATTAAGTATA10.7352941176470588No Hit
ATCATATATTTTATAAGAATTCATTATGATTTTTTAAGTCACTGGTTCAA10.7352941176470588No Hit
GCTGAAATTTTCTAACTTGATAAGCAATTTTTACATTGGCTAGAGCATTC10.7352941176470588No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG10.7352941176470588Clontech Universal Primer Mix Long (96% over 26bp)
GGTGTGAGCCACCACATTCGGCTGGAGCCATGTTCTAATCCCAGCTCTAC10.7352941176470588No Hit
ATATAAGAATTCAAACAACTCTATAGGAAAAACTCTAATAATCCAATTTT10.7352941176470588No Hit
GCCCAAGGTAATTTACAGATTCAATGCCATCCCCATCAAGCTACCAATGC10.7352941176470588No Hit
AGGCAATACAGTGGAAAAAACACAGTCTTTTCAACAAATGGTGCTAGAAC10.7352941176470588No Hit
GGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCG10.7352941176470588No Hit
CAGTTTGTATATACACCTTCAGACCCATACAGATAGATGCATAAGAATAT10.7352941176470588No Hit
TCCTTCCCCTTCCCAGACCATAAAAACCCTGGACCCCAGACTCATAGTGG10.7352941176470588No Hit
GCTCTCAATTTCTGACATAGCACCTCCCCTGATTCTCAATTTATGACAAT10.7352941176470588No Hit
GCCNTGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACACCCTACT10.7352941176470588No Hit
ATTCTCCTGCCTCAGCCTCCTGATAGCTGGGATTACAGATGAGCTGTCCC10.7352941176470588No Hit
TCGAATTGCTGCGCCAGTTGCGCGCGACGGGTGTTAACACGCCGATTTTG10.7352941176470588No Hit
ATTTTGACCCTGAAGAGATAGATATTGAGAAAAAAAAAAATCACAAGCTT10.7352941176470588No Hit
CCTCAGTAGTCCTATAAGGTAGGTACTATCATGGTCTCATTGCACTGATG10.7352941176470588No Hit
CCACCAGGAGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTC10.7352941176470588No Hit
GTACATTGATGCCTCAGACATTGTTTACTTGACTCAGAGATTAGCACTTA10.7352941176470588No Hit
GCCATAGCAGCAATACTCGAATGGATCGCGTTATCGGGCGAAGCCAGAAT10.7352941176470588No Hit
AATAAACACTAAGTCTGTTCTGTGTGTTTTTTTCCTGCTTACTTTGCCAT10.7352941176470588No Hit
GTACTTGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA10.7352941176470588Clontech Universal Primer Mix Long (96% over 26bp)
CAAATTAAATGATGCTCGAATGTACTAATAAGTAACTACAAATAATAAAA10.7352941176470588No Hit
CATGAGTTTGAACTGAGTGAAAGTTTGGCACTTAGCTCTTTGATCTTGAG10.7352941176470588No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.7352941176470588No Hit
AAGCTTAACTTACTTACCATCCCATTCAAATACCAAACAAGAACCAATGG10.7352941176470588No Hit
GTTTATATTAACATCAACATATTCAGGAAGTTATTAGCCATTGCTTCCTC10.7352941176470588No Hit
TTCTTAAGTGTTCCAAGTAAGTTTAGAAACAGAAAAGGAACTTGGGATTC10.7352941176470588No Hit
GGGTAGACTTCTTGGCAATACTGCAGGATGCCTTCCTTGGTATCAATGCA10.7352941176470588No Hit
CTGGTAGATGCGGGCTATGATGGCATCGTTAGCGCTGGCGTGGGTAACGG10.7352941176470588No Hit
GGTCATCTGCTTTAGACCCAGCTCCATGTCAAGTCCTGTTACGGTCCCTC10.7352941176470588No Hit
CTCTTGCTGCCCAGGCTGGAGTGCAGTGACACAATCTTGGCTCACTGCAA10.7352941176470588No Hit
GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACG10.7352941176470588No Hit
GCTCAGCTTTCTCACCTGTAGAATGTGGCTGGTGATAGTTGCTATTGCAC10.7352941176470588No Hit
ATGGGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAGTAA10.7352941176470588Clontech Universal Primer Mix Long (95% over 21bp)
GATGGGGTTGTTTTTTTCTTGTAAATTTGGTCAAGTTCCTTGTAGATTCT10.7352941176470588No Hit
CTTTTAATATGTGCAATATCAATTATACCACAATAAAGCTATTTTTAAAA10.7352941176470588No Hit

[OK]Adapter Content

Adapter graph