FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCAACCTCTGCCTCCTGGGTTCAAGTGATTATCCTGCCTCAGCTTCCCAA211.11111111111111No Hit
GCCCTGCGGGCCGCCGGTGAAATACCACTACTCTGATCGTTTTTTCACTG15.555555555555555No Hit
GATTCCTTAATCACTTCAACGGAGAACCTCATGGAAGACATCGTCATCGT15.555555555555555No Hit
GAAGAGAAACTGCATGACAATATGCTAAACATGTAAGCACTGCTGACTGA15.555555555555555No Hit
GTCATGCTGTGCTCATAAAGGAGGGGCTGGTCTGCTCGCCATCTAGTACA15.555555555555555No Hit
GTGTCAACCGCTGCATTCCTCAGTTCTGGAGGTGCGATGGCCAAGTGGAC15.555555555555555No Hit
TTTCAGCTGGGATTTGGTTTCTGATCAGGTCGCCCCGCTCGTCCATCGCG15.555555555555555No Hit
GGAGTGGGCTGCTGCCGGTCTCGTTGACACCGACCTAAGGCTGCGCTGAA15.555555555555555No Hit
GCATGAGCAGGGTGATCCAGGCCACCCAGATGGCAATGGAGAGGAGCATC15.555555555555555No Hit
ATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTC15.555555555555555No Hit
GTAGAGTGGTGTATTAGGTGAACTTGACAGAGAGTAGGGAGTGGGTAGCA15.555555555555555No Hit
GAATTCACCAAGCGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTG15.555555555555555No Hit
GAGATGTTCTCCGACATCTACAAGATCCGGGAGATCGCGGACGGGTTGTG15.555555555555555No Hit
CTCTCGTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGT15.555555555555555No Hit
CCTTGACCGAGATGCGGATCGGGCGCTGTTCCACAAGCTCGGATTTCACA15.555555555555555No Hit
ACATGACATTAACCTATAAAAAAAGGCGTATCACGAGGCCATTTCGTCTC15.555555555555555No Hit
ATTATGACCTTCTTTTCATGGTTTTCTTTACATTCAACTTGCTTGTGTTT15.555555555555555No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)