FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626602

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626602
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCTACGATGCGAACGGCGAGCGACGGCCTTTCAAGGACATGCCGAAGA53.2679738562091507No Hit
GTTCCTCAACCAGATCAACAAAGGCGAGATCGTCCTGGGGCCGCGGGCGA31.9607843137254901No Hit
GCGCCCGGGTGCAGCGGCACGCCGCTGTACTTCCAGGCCACCGCCGGGTC31.9607843137254901No Hit
GATCACAGTTGATGCCAGACATCGCAATACACTTCTTCTCCTGTGTGTCC31.9607843137254901No Hit
CGCACAAAGCGCCGCAGCACCAGTTCGCGCTCGCTTTCGGCAATGCCGGG31.9607843137254901No Hit
GCGGCGGGGTGCGCTGGGTCAACCACCCCCTCAAGGACGACGCGGCGCAC31.9607843137254901No Hit
GAAAAGGTTCGGTGGAGGTCGGCAGGATGGGATGGACGAGACGCAGCATC31.9607843137254901No Hit
TCGTCGGCCCGACCGGCGCCGGCAAGTCGGTGCTGCTCGCGCTGATGGCG21.3071895424836601No Hit
GTTACGTGGGAGCATCTCCAGAAACTCTAACTATCCAACAAGAAAGTGTA21.3071895424836601No Hit
GTGTGGTAGTTTAATCGAAAAGAATTACCAAGAGAAACTTTTTGCCGTCA21.3071895424836601No Hit
GGAAGGAGAAGCCGGCGGGTGCGCCGACGTCCGCCGAATAGCCCGTCCTC21.3071895424836601No Hit
GTTTGATGCCCTGCGCCAGTTTTTCCCGCACATGATATTCAAGTTTTAGA21.3071895424836601No Hit
GTGTAGAACATGGACGCGGTCGGCTTGCCCTGCACGTCGCGGATGGTGAG21.3071895424836601No Hit
ACTTTGGGAGGCTGAGGCGGGGGGATCACCGGAAGTCAGGAGATCGAGAC21.3071895424836601No Hit
GGGGTGGCGCTGTCGAGATCGGGACCGCGAAAGCACGCCGTGCGCTGGAA21.3071895424836601No Hit
ATATATCGGTACTGTCATATTTTGTGTAATGGGTGGAATAGTGGGGATGA21.3071895424836601No Hit
CCTTGCAGACACGTGGCGATACTGTGGGCGTCGGTCAAGCCGTCAAACCG21.3071895424836601No Hit
CGCCATGGCCGCGGAGATGGGCCGCGTCTCGCGGTGCGGCAATGCGGCGA21.3071895424836601No Hit
AGCTACGCCCGGCGAAGCGCTAGGGAATAGCTCCCCTACCTGCCGGGCAA21.3071895424836601No Hit
GGTGGTGCACCCGTCGCTGACCCAACAGGCCAAGGCCGCTTGAACAAGAG21.3071895424836601No Hit
GTGGTGAAGGCCGAGCTCTTCCCCACCCAGATCCGCGCCCTCGGCGTCGG21.3071895424836601No Hit
GACGAAGGCCGGTGGGTTCTTGCGGCAGTCCTCCAGCAGGTCTGTGAAGG21.3071895424836601No Hit
TTTCACGACTCTCAATGGAACGACGGGCGCGCGGCCGTCCATCAACGCGC21.3071895424836601No Hit
GTTGTGGTCTGGCGCCCGCGATGATCGAAATCGGAAGCGTTCTCACGGAC21.3071895424836601No Hit
AAAAATAAATCAAAATTTGCATAGAAACGAATGAAAATGAAAACACAACA21.3071895424836601No Hit
TTGCGGACGTTGCCCTGGCCGTCGAGCTGGACGCGGAGCTCCACCACGAT21.3071895424836601No Hit
TGCCAGTACCGCACCTTTCCAGTTAAATATCAGCTGAATTCCCCATGCAT21.3071895424836601No Hit
CGTGTACTCGACGCCGAAGCCGAAGCCGGCCGGGCTGGACTCGCCGGCCA21.3071895424836601No Hit
ATACCTCGAATCGCGAGGAGTCACTCTTACCGAAGATCAATTTTTGCACC21.3071895424836601No Hit
CTTCCTGGGCTGGACCGATCCACGGATGCGGGAATCTTTTCTGCGCCAGA21.3071895424836601No Hit
CGTACCGTCAAGCGCATGCCGCAGAAGCTGTCGCAGATCGTCATCCACTT21.3071895424836601No Hit
AGGGCAACCTGTGCCGCTGCACGGGCTACGGCTCCATCGCCGACGCGATC21.3071895424836601No Hit
GATCCTGACCGAGCGCAGCATGCGCATCGGCGACATGGTGCGGCTGGACA21.3071895424836601No Hit
GCGCGGGACGAGCGGCGACCGGCGCGAATTGTGGAGCTCGTATTCCTCCG21.3071895424836601No Hit
GTCCATGGCAGTTTCACAGATCGGACAACGCTTCTTCGACATCAGGTCAG10.6535947712418301No Hit
GTACGCCACCGGCCTTCGCAAGTCGAAGTTCATGGCATCGATTGGGTTCC10.6535947712418301No Hit
GGCCAACACTGCGCGCTGGGCGCAGCAAGTCGAGCAGATGACGTCGCAGA10.6535947712418301No Hit
AACATGAGTTCGAGGCCGATGCCTTCGCCGCCCGCCACAGCAATGCGCAA10.6535947712418301No Hit
GTAGGCAAAGTTAGTTGGATTGAGTTCTGCACCTTTGGCCAATACCCGAA10.6535947712418301No Hit
GTTGAGCGATGGCCCTTCCATGCAGAACCACCGGATCACTATGACCTACT10.6535947712418301No Hit
GCCAAGATTGTGCCACTGCACTCCAGCCTGGGTGACAGAGTGAGATTCCA10.6535947712418301No Hit
GTCACCAATGTGCTTTACCAATGGTAAGGGTTCGACCAAAGAAAGTGCGC10.6535947712418301No Hit
CAACTGATCTCCGGCCAGGTGGACCGGCTGGTGGTGGAGCCCGGCCGGGT10.6535947712418301No Hit
ATATATAACTCACCTTTCCAGACCCAATTGTGCATGAGTGCCATTTTGAA10.6535947712418301No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.6535947712418301No Hit
AGGAGAAAAATGATGGTCCGGACCGATAATCGAGCAGCAAATGATGTACG10.6535947712418301No Hit
GTATAAGTTTTTGTGCCAATGGGAATGGCTCGGGATAAATTGTTATTGAT10.6535947712418301No Hit
GCCCGGTGGCCAGCGCCACGCTGATCGCCGAGTTGCCCGAGCTCGGCCGG10.6535947712418301No Hit
TTCTACAAGGACCTCTACGACATGCCGGGGCAGCCCCCGAACATCGCGCG10.6535947712418301No Hit
GACTAATATGGGTCCCAAACAACAGACGACACAAGTATTTCCCCTCCTAA10.6535947712418301No Hit
TAACAATAATTGGCAAAGTTACAGGCAAATACCGCTGCAAGATGCAAACT10.6535947712418301No Hit
GGTCAGATTGTCGATGTAACACCAACGACCTATACCATTCAAATCGCAGG10.6535947712418301No Hit
CCTTCATCATGGCCTCCGCCTCGGCGCGGGCGCGGAAGCGGGCGTCCACG10.6535947712418301No Hit
GGCCAGCCCTCCATCGGCAACATCAAGTTCGTGGTGATTCCCGATCCGGA10.6535947712418301No Hit
ATTATCTGTAGGTGATGGCTTGAAAGAAGAGGTTAAAATTGGACCACTCA10.6535947712418301No Hit
GCATGGTCGAGTACGACGTCGGCGCCCAGGCCACGGGCACGCTCCCGTTT10.6535947712418301No Hit
GTCGAGATCGCCAGGCTGCAGGCACGGGAAGGCTACGCCTATATCCGGCC10.6535947712418301No Hit
ACTCATGCCTGCCGGTTTCTACCTCATCTTCGGAGCCACCCAGTCGTACA10.6535947712418301No Hit
GCACAAACAGCTGCTTTGGATAAAAATGGGAACATAAACGGCGACACTAA10.6535947712418301No Hit
CCCGGCTGTGGGCGCAGACCGAATGGGTGAAGGCGGGCGTGCTGGCGGCC10.6535947712418301No Hit
CCGGTGGGGACAATGCGATGGCGCGGTTCCTGGAGAGGTTGTCGGGTACG10.6535947712418301No Hit
TCGCCCGGCAGGGCGACCACGCGCGCGATGCCGGCGAAGGCCGCCCGCTC10.6535947712418301No Hit
CGTCCTGACAGCACTGAGCCTGAGATGACACGGTTTTCACCAGCGGCCAG10.6535947712418301No Hit
GTCCATCACGGCAGGCTCTACAAAGCGTGGTGCAGTCGACATCCCGGCCT10.6535947712418301No Hit
GAATAAGGCCGCTCCGACTTCATACAGTCCGATATAACCGATACTTATAG10.6535947712418301No Hit
GCTCCGAACTGGACGGGGCGCTGCGCGCCACGCTCGCCCCCTTCGCCGGC10.6535947712418301No Hit
GGGTGAGCATGAGGGCCGCGATGCCCGCGACGTGCGGCGCGGCCATGCTC10.6535947712418301No Hit
TTTTAGTAGAGACGGGGTTTCACCATGTTGACCAGGCTGATCTCGAACTC10.6535947712418301No Hit
ACTGTATGGTCGGAGATTATAATATCTTTGCTAATAACGTCGGTGTGGCT10.6535947712418301No Hit
GAGAGCTGCGGTTACGACCAGCTCGACGTCCCGCTGACCTACGATCTCCA10.6535947712418301No Hit
GCGCGAGGGCGTTCCCGGGCAGGCGCGCTATGGCGTCGAGCAGCACCGTT10.6535947712418301No Hit
GCCAAGAACTGCGCCGATAGCACCACTGAAGCCCATCAGAAAACGAGCCG10.6535947712418301No Hit
GCGACGCGCTGCACGAGCGCCTCACCGCGCGCTTCGTGGACCGCCGCGCC10.6535947712418301No Hit
AGACGGGACCGCGCGCTCGGCCAACGTCACCGCGCTCCAGCGCACGCGCG10.6535947712418301No Hit
GAGCACTTTCAGCAGGGCTTCGGCACCCGAGACCTCGGCCTTGGACGGGG10.6535947712418301No Hit
TTCTTTAACAGATGCCGCAAAGAGGTCGGTTTGCCTTGCTCTTCGCTGAT10.6535947712418301No Hit
GCAGCGAGTCGATCGCCCGCAGGATCTCGTCGAAGTTGCGGCCCGTGGTC10.6535947712418301No Hit
ACCGGATCGAGATCGAGGCGCTGGTGCTCGGCCTCGCCGAGGTTCGCCAC10.6535947712418301No Hit
CCTTTATCGTTCTTCTTTTCAGCTTCTTCTACAGTCTTCTCAGGATCTGT10.6535947712418301No Hit
GCTCCATGAAGGTGCCGCGCCCGTCGGGCACGTGGGCGACGCCGCGGCGG10.6535947712418301No Hit
CATCGCAGCTGGTCGATCGTGAATTATTTGATTTTGAAGTGCTGGACAGC10.6535947712418301No Hit
CCAGCATGCCGGGGGAAGCGGGATGACATGCGGCTTGCCGGTCTGGTTCG10.6535947712418301No Hit
CGCACGACCTGCTCGTTGAGGTCCAAGCCGTCTCGGTCAACCCCATCGAC10.6535947712418301No Hit
GCGCCTCGCCCAACCCCCCCGACCTCGTGGTCGCCGACCGCCGCTTCTCC10.6535947712418301No Hit
GTGGTGCAGGTGCACCACGTCCGGCCGCAGCTCCGCGAGCAGCGCCGCCA10.6535947712418301No Hit
GCCTTTAGTGAGGCTTTTCCCGTGCAGATCGGCGGTATAACTCCAGAAAC10.6535947712418301No Hit
CATAGGCGCTGCTGGCGGCCCCGGACGTGAAGGCCGCGCCGCGCACTGCC10.6535947712418301No Hit
CTATGTCACCAGGTTCGAGAATCTGGTAGCCCTCGAAGGACGCGGGCACC10.6535947712418301No Hit
GCAAACAAGCCCGCGCGCATCGACACTGATAGTGTGGCTGTCTCTTATAC10.6535947712418301No Hit
TCGCAAGGGTGAGCTAATCTCCAAAAGCCGTCTCAGTTCGGATTGTTCTC10.6535947712418301No Hit
GAAGGATATTGCGGTCGAGAGCGAGGTGTTTAAAGAATGGGTGGAGAACG10.6535947712418301No Hit
GACTTCGGCGACGACACCCACGCCCTCCTGCTCGACACTGGCGCCGACCC10.6535947712418301No Hit
GTGGGTGGTTCCACATTCCGTAGGACCCCGATTTCCCGGTCCCCTCTTGA10.6535947712418301No Hit
GGACATGCCGTGCATGACGACCAGCCGGTCGCCCGGATCGTCCGCCGTAT10.6535947712418301No Hit
AGTCGGGGCAAGAACGGACGCTTGGGCATTGCAGAAACCATTGGTATGCC10.6535947712418301No Hit
TGCCAACACGGTGGGCTCCAGGGGCCTGGGAGCTGTAAGAATGTTCTCTG10.6535947712418301No Hit
ATCACGTACCATGCAGCTTGCATAATAACGGCTCGAGTTGAACTCGCACC10.6535947712418301No Hit
CTATATGTCATCACTGGCGCAACTGGTCCAAACGTTTCTTCATGCATTGC10.6535947712418301No Hit
ATCAGACGATATTTAACAATACTCCTTCTTATTATTTCTTTTTTTGAGTT10.6535947712418301No Hit
GTTCATGCATGAACCACAGCAAGCGACTGGCGGCACCGGTACGCTGCTTG10.6535947712418301No Hit
GCCGCGAGGACGTGGGGCCGCTCGCCGGCGTCGAATCCCCCCTGGCCTCG10.6535947712418301No Hit
TGTTATTGTAGATATGAGAACAGGGGGCATTGAACCGAAGCGACTCATTC10.6535947712418301No Hit
GAGGTGCAGGGCGCGTTCGGCAGCCCCGCGATCATCGCGCTCGCCAGCCT10.6535947712418301No Hit
CAACGGCGGCGAGCACACCCGGCCGCTCGACCAGGCGCTCGCGGACGAGG10.6535947712418301No Hit
TTTCCAGACTCTTCGAGACTGGCACCCAAAGCTGACCCCATATTTCCTGG10.6535947712418301No Hit
ACTCTCAACATAGCGCCGTTGTCCTTCTGCATATAACGTATAAAATGCTA10.6535947712418301No Hit
GCGCGTATCAAGCGGACGAAGCGGGCAACCTGCGCTACCGCCTGGCGCAG10.6535947712418301No Hit
ACTTAATCTCGGGCAGATATCCATGGACATGAAGAACCTCTGTCTCTTAT10.6535947712418301No Hit
GATGGCAATCGGTGACGGTGTGGACCGATGCGGAGGCTTTGTTCAGCGTC10.6535947712418301No Hit
GGTGATGAATTACAGATTGTAATTGCTTCTCATTTAAATGATTATCTAGT10.6535947712418301No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)