FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT510.204081632653061No Hit
CCGCGAGCCACCGTGCGTCGCGCGTGAGGCCGTACAGCCGCATCAGGCCG48.16326530612245No Hit
GTCAAGTGGGGATCCCATCGTAACGATGCCCTTCAATCCCGACAGGTCAC24.081632653061225No Hit
CTTAGAGGCGTTCAGTCATAATCCCACAGATGGTAGCTTCGCCCCATTGG24.081632653061225No Hit
CTGCATGACAGCGCTGACAGTGACACTGATGGTGCTGAGCTCCCCACTGG12.0408163265306123No Hit
GCCCTTGATGGTGGCCAGCTTCGCGGTCACGTCCGACGAGTGGTCCACGG12.0408163265306123No Hit
GAGACATTTAGGGGTCTGCCTCAGGTCACACAGCTATTTAGTAGAAGGCT12.0408163265306123No Hit
GCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACC12.0408163265306123No Hit
GTACATGGGTAGTGTGGCTTCTGTAATTGGCAGGTTAGACAGAGTAAGTT12.0408163265306123No Hit
TCCGTGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCT12.0408163265306123No Hit
ATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGC12.0408163265306123No Hit
ATATCATACTGAATGGGCAAAAACTGGAAGCATTCCCTTTGAAAACTGGC12.0408163265306123No Hit
GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA12.0408163265306123No Hit
GTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGT12.0408163265306123No Hit
TACCAGTACTGATTGCCGAGCAAATCTGTGAATGGCGACTATGCGCCTAG12.0408163265306123No Hit
ATCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTA12.0408163265306123No Hit
TTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTG12.0408163265306123No Hit
CGCGGCGACCGCACGCCCCGCTTCGTGCTCGGCCTCATGCTGCTGCTGTG12.0408163265306123No Hit
GCGATGCGGCGGCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAAC12.0408163265306123No Hit
GTGTAGTGGACATCAAAAACCCAAGCACCCACGGCACACCATGTGTTGAC12.0408163265306123No Hit
AGACAGAAGATACTAACATGGTAGAAATTATCCTGAGTGGGGAGAGAGAA12.0408163265306123No Hit
CGTGAAGCCAGCAATTGTTTCGCAATTCGGCATTTTGAAAACAAATTTGC12.0408163265306123No Hit
GAGAAAGGATCTGCCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAATTT12.0408163265306123No Hit
CTAATAGGGAACGTGAGCTGGGATTAGACCGTCGTGAGACAGGTTAGTTT12.0408163265306123No Hit
CTCTCTTTGTCACCTAGGCTGGAGTGCAGTGGCATGATCTCCACTCACTG12.0408163265306123No Hit
CCCATGGTGCAGTCATCAGGCAGCCGGATGAGAGCAGATGTGTCCATGAA12.0408163265306123No Hit
AGCAGAACGAGAATTCGACCTCTATCTGTCCGCCAACCGCACCTGCGAAC12.0408163265306123No Hit
GATAGCGACTGGACACAACATGGCAGTTGGCCCACATGGAATATCGGTTT12.0408163265306123No Hit
ATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAACACTCTAA12.0408163265306123No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC12.0408163265306123No Hit
CTATAAACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATA12.0408163265306123No Hit
GTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAATGTCTG12.0408163265306123No Hit
ACGTTTTGCTGGCAGCAGGATCATGTGACTTCAAATGCAGAGTGTTTTCT12.0408163265306123No Hit
GAAGATGGAAATGGACATTACAACCAGGGATGTGTTCAGTCCTGTGCTGG12.0408163265306123No Hit
GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC12.0408163265306123No Hit
ACCCTATCCATCCAGCCCTTCAGGATGGCCGGCACGCTGAACCAGTACAG12.0408163265306123No Hit
GCGGTTGCCCAGTTCGCCGAAGCGGATCGCCGTGAGCCGCCAGACACGGC12.0408163265306123No Hit
GCTCGACGCCGCGAGAGCCTGGTCGGCGAGTGACGTGCCGGTGCAGTCTC12.0408163265306123No Hit
CCGTGCCACAGCACTGAAATCATTTCTGAACCGTGGCTGGAAGACGAGCT12.0408163265306123No Hit
CTCAAGAGACTCTTCATTTAGATTGGATTCTGAATATCAGTCTACATCAG12.0408163265306123No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)