FastQCFastQC Report
Wed 11 May 2022
EGAF00003626706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3325344
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG46000.13833155306638953No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36470.10967286392024404No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)