FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626729

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626729
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCAAAGAAAGCAGAGTAGGAGGTGAACTTAGCCTCCGACTGCACCAGTGC27.6923076923076925No Hit
CTTCGTCACGCCCGGCAACAAGGTGCCGTTGATCCCAGCTCACAAGTTCA27.6923076923076925No Hit
GACTGGGACTTATGCTATCAGCTGTCCTGGTTCTTAGGCTTCCGGGCTTG13.8461538461538463No Hit
GGCTTGTGTCAGTGTTCCCATGTATCTTACCAGGCACGTTGCCTGCATCT13.8461538461538463No Hit
GGGCTTGACCAACCTCACTCCAGGCACTTAAAATGAACCCACAGTGGGTA13.8461538461538463No Hit
CACCACCGAGTAGGAATAGTGGTAGTAGCCTCCTCCGTTGGCGCAGCTCC13.8461538461538463No Hit
CACGTGTTAAGAGGCATGTTCCTGTGTTAGATATCTGGGCTTAATTCTAT13.8461538461538463No Hit
GACGTAGTCCCCGAAAGGCAGGGACCTGTTTCAGGTTGCGCAGCATTATG13.8461538461538463No Hit
GTCGGCGCCAGCACCATGGCGCTGGCGCCGACAGTCGCTGACAGCGGGAT13.8461538461538463No Hit
CTGCCCACCTGACCTTCCGTCTTTTGCAGAGCGTCCAGCAGAACGGCTCC13.8461538461538463No Hit
TTCTAAAACCAGCTTGAACATCAGGAAGTTCACGGTTCACATATTGCTGA13.8461538461538463No Hit
CTCATAGTCATTGGTTTCTCTAAGGTTTAACTAAATGATCTTATTATGCT13.8461538461538463No Hit
CTCCAAGAGCTACAACCTTGCGGGCTTCCGCCTGGGCTTCGCCCTGGGAA13.8461538461538463No Hit
GTTCAACAAGGTACCTTGAATGTTCAAGACCCAATCGTTGTCGGAAATAC13.8461538461538463No Hit
GTAGAGGATGAAGAGGGGCTCCTCCGCCTCCATGGGTTCGGGATCGCACC13.8461538461538463No Hit
GCTACTGACAGCCTTTTCAAGGAATCTTTAGAAGAAAATGAGCAAAGTCT13.8461538461538463No Hit
GACCGGCGATTACCTATGGCGCAGCAGCGCCAAGGTCGGTGCGGGGAAGT13.8461538461538463No Hit
CCGCACACGCACCGCAGACGAAACATTCAACGACATGAAAGGAATGGCAC13.8461538461538463No Hit
TGCCTGCTCAGCTGCTTGATTATTGCCCGCTGAGCAGCATGATTCCTCAC13.8461538461538463No Hit
GGCTCACTGCAACCTCCACCTATCAGGCTCAAGTGATCCTCCCACCTTCC13.8461538461538463No Hit
GGACATCCACTTCTACATCAATTCCCCCGGCGGCTCCGTCTCGGCGGGTC13.8461538461538463No Hit
AGGCGGCGAAGCCCAGGTGGACGAAGGCGAAGCCCCGGAAGGTGAGGCCG13.8461538461538463No Hit
CAGTTTGAACGTCTGGAAGTAAGTGCACGGTTCATGTACTGTTGAAGCCT13.8461538461538463No Hit
GTAGTCTACAGTAGTTTACAGTAATGCCCCCAGGCCTTCACATTCACTCA13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)