FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003626730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTTAGCACGTAGTACGGCGGCAGCTTTCGGTTGATGTTCGACTCGTCAC13.8461538461538463No Hit
GCCTCCAGTGGCCACTCTTCACCTCACCTGGACGCATCTCCTTTTGCTAG13.8461538461538463No Hit
GTCATGCAGTGATCACGTGGCTATCATGCACTACTCACTTGCCTGATCAT13.8461538461538463No Hit
GAGCATTGAGGTGCTCGAGGTCCTGGTCTCGGAGGGTGCAGCCCCCAAGG13.8461538461538463No Hit
GCTCCATACTCACTTGTATTAATCTGCGTTCCTCAGAGAAACAGAACCAA13.8461538461538463No Hit
AACAACGACCGTCAAAACATGGCTGTTTTTCGCTGTGTTTTTATTAACAG13.8461538461538463No Hit
CTAAGCCGGTGGCAGCGGTCGCAATGGCCTAAACTTCCCCGCACCGACCT13.8461538461538463No Hit
CACCAGGGCGATGCGGACGAACCCCTTTCCTCCAGGGCCAAAGCCCCTTC13.8461538461538463No Hit
GAAGAACAGTACAAAAAAGATCTTCACGACCCAGATAATCACGATGGTGT13.8461538461538463No Hit
GAATAGGATTCGTGATCCGTTGTTGAAGAGGATGGCTTGTTGTCCGTTCG13.8461538461538463No Hit
GTGCTGGTTTCCAGAACATTTCGTACAACGGTAGCGAGTCGCTGATTGTT13.8461538461538463No Hit
CTGTCGCGGCTCGAGGCAGGGACACCCCTGAACCTCCACCGTGCAGCCCC13.8461538461538463No Hit
ATGCCAGCAAATTTGGAAAACTCAGCAATGGCCACAGGACTGGAAAAGGT13.8461538461538463No Hit
ATCTACCTCCCCATGATCCCCGAGGCGGCAATCGCCATGCTCGCCTGCAC13.8461538461538463No Hit
GAAATGTAAAGTGTGTTGACAAATTTCAGGTATAATGCAGGTAAATGATC13.8461538461538463No Hit
CAGCATGTTACTGCACTTAATGCTGTAGGCAATTATAACACAATGGCAAG13.8461538461538463No Hit
GTGGTGCACGCCTGTAATCCCAGCTACTTGGGAAGCTGGGGAGGAGAATT13.8461538461538463No Hit
GTGCTGGTTTCCAGAACATTTCGTACAACGGTAGCGAGTCGCTGCTTGTT13.8461538461538463No Hit
AACACGTTGGGTAGCTTGACGTTGTTTCATGAGGGCACGTTTGGCACGTT13.8461538461538463No Hit
GAAAAGGAAAAGGTCTTGGATTTAACTGTTGTGTGCTTAGTCGCTCAGCT13.8461538461538463No Hit
TCTCTATGCCAGGAACTCCCAACACATTTTCCTTGAAACTGATGAAATGA13.8461538461538463No Hit
GGTTCAAGTGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGC13.8461538461538463No Hit
NTTTAGCACGTAGTACGGCGGCAGCTTTCGGTTGATGTTCGACTCGTCAC13.8461538461538463No Hit
ATCCCACCCTCTTTGAGCACAGGCTTCCTGCCTGCCCTCCTGGACTTGGG13.8461538461538463No Hit
GCCTTTCATAAAGAACAAAACCTTAGTGGTGTGGGACCGTGGAAGAGCTC13.8461538461538463No Hit
GTTCAGGCGCTTGCGCAGATAGATGATCTCCTTGGCGTGGATCTCGATGT13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)