FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCCACAGGCCGTCGAGATGCGAGAACGGCCCGTCGACCAGCTCCATGC43.8834951456310676No Hit
TGATGTAGTAGACGGGGATGGCCAGTTCGGTGCGGGGCAGGCTCACGTCC32.912621359223301No Hit
ATTCGGCGCTGGCAAGGGCCTAGCTTCGCGGCCCGATCTTGAAGACGGTG32.912621359223301No Hit
CTTCGGCAAGGCCCACCGCGCCGAGCCGCGCCTGGCCGTCATCGCCTACG32.912621359223301No Hit
GCGCCGGGGGCGAAGAGTTCGCCCGCTGAACCGGCGGCTGCGGCACTAGC21.9417475728155338No Hit
ACTACGCGCTGACCTTCGGGCCGACGCGCGCGCCGCTGCTGGAGGACAAG21.9417475728155338No Hit
CGTCAGCGCCCGGACTTGCGCACCCGTCACGATGGTCAGGTTCGGACGCT21.9417475728155338No Hit
CAGCACCTGTGTTCTGGCTCTCTTTCGAGCACTCCCAAATCTCTTCAGGA21.9417475728155338No Hit
GGCATTCCCAAAGAAGGTGTACAGCAGTCTGAATCTTGACTCTCTGTCAT21.9417475728155338No Hit
CTATGCGCTCAAGCGCCACGCCAGCCCGCGCATCGAGGCGCCGCTGGCGG21.9417475728155338No Hit
ACCAGCCCCTTTGCCGCGCCCAGGGCCTTGCCGGGTTCGCCCGACGGCGG21.9417475728155338No Hit
TCGCGAAGCGGTCGCCCACGAAGACGGCGGGCACGTCCGCGATCAGCATG21.9417475728155338No Hit
CCCCACCCGCGCGCCGCGCTCGACGACGCAATGGGCGCCGATGCGTGCAC21.9417475728155338No Hit
GTTCAAGCCTGAGCGTGACGGTCTGTTCTGCGCCAAGATCTTCGGCCCGA21.9417475728155338No Hit
GGTGAGAAAATGACACGGGAGTCAGGACTTGAGGACAGCGGCGCGCCAAG21.9417475728155338No Hit
ATCGTGCCATTGCACTCCAGCCTGGGTAACAACAGCGAAACTCAAAAAAT21.9417475728155338No Hit
CTGCAGCAGCACGCCGCTGGCCGGCAGCGCGGGCAGCCGGTCCTGCACGG21.9417475728155338No Hit
ACGACATGCTTACCGCGCGCCACGTTGACGACGAATGCGCCCGGTGCGAG21.9417475728155338No Hit
GCTGAGGCTCAGTGCGGACATCTCAACGAAGTCGGAGAACACATCGCTTG21.9417475728155338No Hit
GTCTTCATACGATGAGCCGACGGCCACCACCGGAAGCGGACAGTCGCGCA21.9417475728155338No Hit
CTGTAGGTCGGAGTGGTGGGGGCAATCATCGTTCGTGCACTGAAACTCCT10.9708737864077669No Hit
CAATCTGCTGGACCGGCTCGTCCTTCGGGAAAGAGATCGTCGTGAACATC10.9708737864077669No Hit
CCCCACCCGCGCGCCGCGCTCGACGACGCAAAGGTCGCCGATGCGTGCAC10.9708737864077669No Hit
GTCCGCGTAGAACAGGCGGGCCGCCGCCTGCTCGCTGGCTTCGGCAAGGG10.9708737864077669No Hit
GAAGAAGCTGGCCGACATCTGCTTCGTGCTGAACGTGGAGGACACCCACG10.9708737864077669No Hit
ACCCAACTGGTAAGTAACAGAATAGGGACCAGAATCTGAGTTGGTTGGTT10.9708737864077669No Hit
CAGTACGTCTACACGACGCTCAGCTCCGTGCCCAATGTGCTGCTGATCGC10.9708737864077669No Hit
AGGCAGGGGTCCCCAACCCCCAGGCCACATATACCTACTGGGCTGTGGCC10.9708737864077669No Hit
CATCCTGTCGGTGAACGGCACCGAGCTGGACGCCGGCACCAACGTGTTCG10.9708737864077669No Hit
CTTCTCGATCAGCTCGCTGTACTTCTCGGGCTCGGCGGCGATGAGCTTGT10.9708737864077669No Hit
CCCCGGATAGGTTCGGAGCCACCGTGTGCAGATGTCAGGCCGCCATCGTG10.9708737864077669No Hit
GGTCGAAGACCGCGCGAAGGTGGAGATCGAGGTGACGGCGGTGGTGCCGG10.9708737864077669No Hit
CGCCATCTTCGCTTTTTACGACCGTCGGATCCCTGACGGTATCGTCTCTG10.9708737864077669No Hit
GCGTCATCAGCGCGCGCACGCCGTGGCCCGCGCAGGCGGCGGCCACCTCG10.9708737864077669No Hit
GGGGTGACCGATGCGGCTCTGCCGTATCACCCCGTGGTAATTGATCTGCC10.9708737864077669No Hit
GACCTGACGAGTGCAGACCTGAAGCCCGCCTTTGTCGGCGCGAGTTGCAC10.9708737864077669No Hit
ATCCTGTTCGGCCGCCAGCCGCTGCGCCTGGGCCGGCGCGCGCCGGCGGA10.9708737864077669No Hit
GGCCGACGATCCGGCCACGACCTACATGGGCGTGAAGGTCGGCCGCAACG10.9708737864077669No Hit
TTGATCGCGTTGCGGCGGTCTTCGCGCTGGATGGTCAGCCACAGCGCTTG10.9708737864077669No Hit
GTGGCGAAGGCTGGCGCCGCCAGCCCCAGCCCGGCACGGTGGACATCACC10.9708737864077669No Hit
CGTCAGCACGGCGCACCACCAGGATGTCCTGGTCCGGCAGCTTGGCCTTC10.9708737864077669No Hit
CGCCAAACAGGCGCAAGACAAACAATGGCGTGCCTTGTTGGTCACATCGG10.9708737864077669No Hit
GCTCACCAACTGGCTGATGCCGATGCAGGCCGCGCCAGACCATGCCGGCT10.9708737864077669No Hit
ATCTATATCTCTGTTTTGGTACCAGAACCATGCTGTTTTGGTTACTGTAG10.9708737864077669No Hit
GGGTTCTGCGCGCGCGCGATGGCTGTCAACATCGCAAGACACAGCAGAAG10.9708737864077669No Hit
GCCCGAAGCCGACCAAAGGATGCCAGCGCGACACCTCGCCGAATACCTGA10.9708737864077669No Hit
AGCTCCTATCGTTCGTTCCTAATTAGTAAACAATCTCCTGTAACGTTGGT10.9708737864077669No Hit
TCTCCAAGGCGCTGGCCGACGCCAACTCCGACCAGCCGGTGGGCCTGCTG10.9708737864077669No Hit
GGGCTGACCACAGCATTTCCGAGCGGTGCTGCACTGGCGAACAGCGATGC10.9708737864077669No Hit
CCGCCGTCGTGCTGGTGGCCCACGTACTTGTCGATGTGCAGCGGGTACGC10.9708737864077669No Hit
TGATCAGCGCGCCGTAGGCGACCAGCCCCAGGCCGTGCCAGAGCTGCCCG10.9708737864077669No Hit
CCCCTACTCCACCACGGTCTTCTTGCCGTCGAAGACGTCGTGGTCGATGC10.9708737864077669No Hit
ATTAATGATTGCGCGATTTCCGACATCCGCACTGCTCAATGACTGCATTT10.9708737864077669No Hit
CGCCTGCGCCCCGCTGATAGACTGCCGCGACACCCCGATGCCGTCAGAAA10.9708737864077669No Hit
GTTCAGGTTGGGGATGCCATCGCGCGGCGAGGCCTTGTTGATGCCCAGGG10.9708737864077669No Hit
ATACTGATCTGGTCGCCACGGTAGCGCATGATGTGGTTCCAGATGGCCTC10.9708737864077669No Hit
ATCGTGTTGATCAGATCGATGCCAAAATTGCAGTGCATCGACTCGTCACG10.9708737864077669No Hit
CCTTTGGTGCTTCCATCTTCCTGCTGGGGTGGATGTCGGAGGAGCTGCGC10.9708737864077669No Hit
GCTCCGAAGACCATGTCAGCACGATTGGCATCATCGGCTGCGGGACAATC10.9708737864077669No Hit
GTCCCAACGAGCTGGAATGAGGTCCTCGCTGAACCACGCTTCGCCGCCGT10.9708737864077669No Hit
GAATACCTGTGATGTCGTGTCATTTTCGTACTATTCATCGTCGATTTGTA10.9708737864077669No Hit
TGCTCAAGCAGGTCAGCTACGACTACGAGCGCATGCAGTACAACACCGTC10.9708737864077669No Hit
GGCGATAGCCGCCCGCCCACGTAACCCACGACGGCGGCAACCAGCACGAT10.9708737864077669No Hit
GGCGATGGAGCGCGCGGTGGCGGGCCTTGGCCCGGTCGCCCATTGCCTGA10.9708737864077669No Hit
AATCCTCGCCGTCGACGGCCGGCTTCGGCCCGCCGCACTGGCCACCTCTG10.9708737864077669No Hit
ACCCACAGCGGGGAGGCATCGTTGGCCCTCCAGAGGCGCCGGATGGCCTC10.9708737864077669No Hit
TCTCGGGCTCGGTCGGCGCGATCTATCGCCAGTTCTCGCTGTCGATGGTG10.9708737864077669No Hit
CCCCCTTCCCCTAGACTTTTCTTACGAAAAGTCAATAATTAAGCAAATTG10.9708737864077669No Hit
GCCCTGGCCGGGATCGACCTGGACGTGTTCGAGTACCGCTACCCCAACTA10.9708737864077669No Hit
GCCCTGGAGTGAGGTGGAAACACACCATGGCTCACGTGCCACATGAACAT10.9708737864077669No Hit
GCATTATCTTATAGTTATTTTATTTATTTATTTATTTGTTTATTTTTGTG10.9708737864077669No Hit
CAGCGGGGCCGCCACGGTCCGCAGCAGCCGGGAGGTCACCCGCCGTCCAG10.9708737864077669No Hit
ATGCCCTGGCGCGAGCGCTCGAAGGCATCAACCAGTCCCGACGGCACGCG10.9708737864077669No Hit
TCTAGCCTCCGTGCAATCAGCGGGCGTTCAGGGGGCGCACGCTCATGCTG10.9708737864077669No Hit
CGCTGGAGGCCGTCGTCAGCCCCGTGTTCGACCGCATCGCCAACACCTTC10.9708737864077669No Hit
CACATCGCGTTGCGCCGACGCCGATTCCTGTCGGTCATCCCGCAGCCGGG10.9708737864077669No Hit
CTGCAGAAGGTCACGCCGTCGCAGTACCGCGCCCGCATCAAGATCGGTGC10.9708737864077669No Hit
GCCCATTGACGCTCACAATGCGCCGCACGCGATCCGGATGACGTGACGCG10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)