FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003626806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003626806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103
Sequences flagged as poor quality0
Sequence length100
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGTACACGCCGCGCGAGATGTACGAGCTGGTCACCCAGGTGGAGCGCT43.8834951456310676No Hit
CTACGGGATGATCGCCTTCGCGTCCAGCCTGGACCAGGCCGGCCCGCTGG32.912621359223301No Hit
GTCAATTTCTGGCTGGCCTTGCGAATCGCCCGGCTCCGCATGTCCGAAAA32.912621359223301No Hit
GTGTTGCTGCCCCGGCCGGTCTGGTAGGCCTCGAAGTGGGCCAGCGACGT32.912621359223301No Hit
TCGCACCTCGATCGAATACATCGTTTTGACGGGCGACTTGGCTTGGCATT21.9417475728155338No Hit
GTATTGCCACTGCGGGTAGCGGCCCTTCAGGCGGATGCGCAGCAGATGGT21.9417475728155338No Hit
CTCCCATACTGCCACTGCAATGCTCTGGACAGGAGTCATCCTAGGAACCA21.9417475728155338No Hit
GTACGCACATCGCCAGGACGCTGGCGGGCTTCGGCTTTCCGGTGCGCGGC21.9417475728155338No Hit
GGCCAGGCCGCCTACCGCTTCCAGCTCGCCGTCGGCAAGGACGGCCAGAG21.9417475728155338No Hit
CTCTCTAAAGAGGTAAGAATGATCATTTTTGCTTATTGATTGACTGAGAG21.9417475728155338No Hit
GGCATTGGCGACTACATGCGCTCCACCCGCGTGACGTGGGACCTGTTTCT21.9417475728155338No Hit
GCGCAGCGTCATGTCGAGCACCATGCCCAGACGCGACGGCAGCGACTTCA21.9417475728155338No Hit
GGTCCGTGTCGCCAAGGAGCCCGACGAGATTCTGGCCGCAAGCAACACCA21.9417475728155338No Hit
CGGCTACCCGCGCGGCCGCGTGCTGGGTGGGTGCTCGTCGATCAACGGCA21.9417475728155338No Hit
AGCTTCCTCGCCAATCCACTCTACCAGGCCCAACTCGGCACCACGCGGGC21.9417475728155338No Hit
GTGCCGAAAGCTGCTCCCGCAGACGGGCTGCCTCTTCAGTCGGCAAGCCT21.9417475728155338No Hit
CCTGGCCTTCGTGCTGGCCGCCCGCTTCAAGCGGCCCGCCCCAATCATCC21.9417475728155338No Hit
TTTTTACTGGGGTCCGGCGCCGGGATTCCGGCTACCACCTGCAGCCCTTG21.9417475728155338No Hit
TCTGGGAACAACCCGACGTACTGAAGCTGCCGATTGGCGCGTTATTCCGC10.9708737864077669No Hit
GGCGTCCGCCTTCGGGTAGAGCCTCCGCGAACCGCGCGATCTCGGCCGTG10.9708737864077669No Hit
CGTCTGGGAGCAGGGCCCCGGCCTGCTGCAGCAGTTGCAAGGCCTGATCC10.9708737864077669No Hit
GCTCGACCGCGACCTGGCGGAACTCGACAAGCTCGACGCCATCTGGAGCG10.9708737864077669No Hit
CACGGACCCGGGCCTCTGGGTGCGAAGCCTTGACGAGGTGCGAGAACTCA10.9708737864077669No Hit
GCTCTGGACCTGGGGCGGCCCATCGGGCCGCCCTTTTTCTTGGTTCATCG10.9708737864077669No Hit
ATTCTATAGTCATCGTGGATACGTCCATCAGAGTCGATATTATCCCGTGC10.9708737864077669No Hit
TGCCAAGGGGTGACGCCCAAATCTAGAAGCGCCTGCAGATGTGCCTTTGT10.9708737864077669No Hit
GCCACGATCAGCGCAACGTAGATGACCATGTAGCGGAAGGTTTTCTTGAG10.9708737864077669No Hit
CTGTGCAACGGCTTGAAGCACCCGATCATGCACCGCTTCGCCGTACTGCT10.9708737864077669No Hit
GAAGTCGTGCGTGACGGCGCCTCATCCACCTATGGCGCCGATGCCGTGGC10.9708737864077669No Hit
CGACGGTGATCAGCACCAGGTGCATCACATTGGGCACGATGTGCCGGGCC10.9708737864077669No Hit
GGTAGTCCACGCCCTAAACGATGTCAACTGGTTGTTGGGAGGGTTTCTTC10.9708737864077669No Hit
GTGTAAAGACATCTTGTTACTTTCTTTAAAATAAAAACTGCAGCGTGGAA10.9708737864077669No Hit
CACCAATATGGTGCGTACCATCAAGATCGAAAACTTTACGCCCATTGCCG10.9708737864077669No Hit
GGAATCGGAACTCCGGGTCGCTGAAGCCGACATCAAAGCCGCTCTGGCTA10.9708737864077669No Hit
GCGGCATCCTTGGCCACGCCCAGCGTGATCTGCTTGCCGACCGTGTTCTC10.9708737864077669No Hit
CAGCTCGATCTCGTCCTGCACGAGCGCGGCCTCGTCGACCGTGGGCCAGG10.9708737864077669No Hit
ACACCTGCGTCGACGTGCTGCTGCCCCTCGGCATGCCGCTGAACTCCAAC10.9708737864077669No Hit
GGCGACGGTCAGCAGCGCGCCTTCGATCAGCGTATGCCTGAGGCCGGTGA10.9708737864077669No Hit
CGCTACGGCATCAGGACAGCTTGCCGTGGCAAGCCTTGAACTTCTTGCCG10.9708737864077669No Hit
TCGGGGCGCGCCGTCCGCGCCCTGCCCGGCCAGATGCTGCTGCTGGCCGG10.9708737864077669No Hit
GAGCTCACCCGTGCTGGCGCGCATCGGCAATGAGCCGGGTAGGGCGGCGT10.9708737864077669No Hit
GAACTCGTGCACGAACACCTGGCGGCCCAGCTGCAGGCGCATGCCCTGCG10.9708737864077669No Hit
AGCCTATCTTGCAACCGAGCACCACAACGAAGGCTGGAACGGAGCATTGG10.9708737864077669No Hit
TGGCAGTCCGTGAAGAACAAGCCCAGCGAGCGCACGATTCCGCTGCATGT10.9708737864077669No Hit
TCCTGGTCCTGACGACATTGTGCTCGACGCCGAGGACCGCAGTCGACTTG10.9708737864077669No Hit
GAACGGGCCCGGGGCGCCCGGCGTGGGCGCGCCCCGGGAGGGATTACTTG10.9708737864077669No Hit
ACCTTACTCGCCAATCCACTCTACCAGGCACAACTCGGCACCACGCGGGC10.9708737864077669No Hit
GAACGGGGCGTGGCGGTCAGCATCGTGGTCTTCCAGCCAGGGTAGCGCCG10.9708737864077669No Hit
GCCCCGCGCTGCAGGCCAACAAGATCGAGGCGCATGCCGACTTCGTGCCC10.9708737864077669No Hit
CCCTGTAACAATCCTGGGTGCTAGGCAGTGGCTTTATCTTCCACTGAGAG10.9708737864077669No Hit
ATCTGGATGGCCCTGTTGGACGCGGCATCAGCGTGGCCGGCGTCGACAAC10.9708737864077669No Hit
GCATGGGCCGTGGGGTCGTGCGTCGTGATCGGGCGGTTGTAGCCCGTCGC10.9708737864077669No Hit
GTGCGCGCATGGCGATGTATTGCGCTGTCCATTCGCAGACACCGGGCAGC10.9708737864077669No Hit
GATGAAGCCCGACACGGCGCAGCGCCTGGCCGACGCCTATGTCTTCCTGC10.9708737864077669No Hit
GGGTTATGACGATCCGGCTTCGCTGTAGAAAATCGTTGAGGACCCACAGC10.9708737864077669No Hit
CCCCGAGGCCGCCAGCGCCCCTGTGCCGCTGGCGCCGGCCGATTGATGGG10.9708737864077669No Hit
GCCTGGGCGTGGTGCCGATGGGTGCCGTCACGCGCTTCTACGTGGACGAA10.9708737864077669No Hit
GCTGATCACCAGCGAGTGCCGCTGATCAGCCGCTGCCGGCCTTGGGCCGG10.9708737864077669No Hit
GTCGCTGGGCCTGGACGAAGGCGAGATCTTCAACGACTACCGGGAAGTCC10.9708737864077669No Hit
GGAATCGGAACTCCGGGTCGCTGAAGCCGACATCAAAGCCGCTCAGGCTA10.9708737864077669No Hit
GCCCTGTCATGATCGCCTGCCGTATGCGCCAATGCCTTGGCATACAACCC10.9708737864077669No Hit
GGTAGTCCACGCCCTAAACGATGTCAAGTGGTTGTTGGGAGGGTTTCTTC10.9708737864077669No Hit
GTGCATGCTTGCGTGGTGGAACGAAAGCACAGCATACGGGCCGGCCCCGC10.9708737864077669No Hit
CTCCACCACTTCACCCCACAGCCGCCCCGCAAGGTGTCCCGGCTGGCCTA10.9708737864077669No Hit
TCCTGGTTGAGCCGGCCGAGTTCATCGACAAAGTCGCGCACCTCGCGGCC10.9708737864077669No Hit
GCCTGTTAGGAGAGCCCCTTGCGCGACGAAGACCTCGATCTTGCCCTTGA10.9708737864077669No Hit
GTTACCAGCCCGGTATGCACCACCCGGACCCTTATGCCGGCGACAAGCTT10.9708737864077669No Hit
CCACGAAGGAACCGTCACAGAATAACCGTTCTCAGTTTTTTCAACGTCGC10.9708737864077669No Hit
CTGGTTCCCGGAGCCGCATGTGCTGCGGTTCGAGGCGCGCGTGCATTCGG10.9708737864077669No Hit
GAGTTAGGTTCAGCACCCCCTAAAGCAGTGGTCCCCAACTTTTTTGGCAC10.9708737864077669No Hit
ACTACAAACCACTCCTCAATGAAATAAAAGAGGATACAAACAAATGGAAG10.9708737864077669No Hit
GCCTGGCGGACACCAAGCGGCACGTCGGTCGCCGTGCAGGTCGTCATCGT10.9708737864077669No Hit
CCAGGAGCTGGTGGAGCGACGCCGCTGGATCTCCGAGCGGCGCTTCCTGC10.9708737864077669No Hit
GGGTTTCCTCTTCCGGCACCTGATCGCGGTGCTGCGCGGCACCCACCGCA10.9708737864077669No Hit
CCTCTCCACCGACCCGGCGACCGGGGCCGACCGGTGGGTGGTGAACGAGG10.9708737864077669No Hit
AGCGCCGGCTGCTGGAGAAGTTCACCACGGTCGTGCGGGCCACCATCAAG10.9708737864077669No Hit
GTGAAACCCGGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGC10.9708737864077669No Hit
GCTCAGACATGCCTGCCTGATGTGGGCGAAGAAGGGCAGGAGCCCAGGAG10.9708737864077669No Hit
GTTGAACAAGGATGGCCTGATACAGTTCCCGACTGTGATCGGCGGCGTGG10.9708737864077669No Hit
GTGACGGTCTCGCCCGGCGCGTAGACGGCCTTGTCCGCATGCACGCCCAG10.9708737864077669No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)