FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAACAACAATGTTTTAGCAGCTCCGCTTGGCGGGCGCAGTCGGTGTTC22.73972602739726No Hit
GCTGCAGGAGCGCGAAATCGTGCGCCTGGGCGGGCGCACGCCCATTCCGG22.73972602739726No Hit
AAAAAGACGCGCGCGAACACCGCTGTTAACAGTGGCGACAGCGACATCGT22.73972602739726No Hit
GCGATGGATCGTCCGCCCCGACGACTGGCTGACAGCCGCTTCGTCGAAAA22.73972602739726No Hit
CCATTGACCTTGAGCATCTCCTTGCGGCGACCGAGATAGTGGACGTAGCC22.73972602739726No Hit
CGTGTCGGCCATGACCACTGTGTCGGCGGTGATCTTCCTCTACAGACCGG22.73972602739726No Hit
CGCCAGTCGTCCACGACCTGCGCCGCGTGGTCGCACAGCACGGTTGAACC22.73972602739726No Hit
CTTGCAGCTGGTACGGAACCGAGCGGCGCTTGCGTTGAGCAACTACCGAT22.73972602739726No Hit
CCTACGTGGATCGCAACAGCTACCTGGGCGATCCCGATTTCGTGAAGAAC22.73972602739726No Hit
TACATGCACCTCGGCAAGACTGAGGGCGAGACATCGGCGACCTGGCTGGA22.73972602739726No Hit
CTTCAACTCGGTGATGTCAATGACGACAGTGTGCGGCCACTTCCGGTACA22.73972602739726No Hit
GCTGGAGCATTGGCGGTTCGACGCGAATGACCGGCTGATCCACGCGCTGC22.73972602739726No Hit
CTAAAGCGAGAGCGACCATGGCCGACATCCTCGACTTCGAAGAAGCAAAA22.73972602739726No Hit
ATGCAGCGCCATCGGGTCCTGAACCTAATGACCCATGTTGATCCTTGGCG22.73972602739726No Hit
CTTCAGCGATGCTGCTTTGGGTCTCCGCCAACCACAGGTCTGTATACGGC22.73972602739726No Hit
ACCTGAAGTTCTCGCAGCCGCAGGGGAGTGATCCGGTCCTAAATGCGGCC22.73972602739726No Hit
AGATAAGGGGCGAGATACGAGACCATGGCGTCGAGCTCGAACTGCGCCAG22.73972602739726No Hit
GGGTGCCGATACTCGGTCAGGCGTTCGGCGAGTGAAAGCGTATTTCGCCG22.73972602739726No Hit
TCATTTAAGTGGTAATCCATTAACTTATGGAACACACGCATGGTCGGATG11.36986301369863No Hit
CCTCCCGGTTGCGTGGGAAGCCTGCAGCGCCAAGGTGGAGGGGAAGGATA11.36986301369863No Hit
CTGAAAAGGCTACTGTGTGAGTCCTACTACATGTGGTATTTTGGAAAAGG11.36986301369863No Hit
GGCCATAACCTATGACGGCGCGCCGTTACCTCCGAAGTATGGCTTCCCGA11.36986301369863No Hit
TCACGAACGCGATGCCGGGCATCGGCGGCTTCGATGGACCGCGCGGCCGC11.36986301369863No Hit
GATCAGCAGCGAACCCGTAAAGAACGCACCAATGAATGCCGATGGGAAGC11.36986301369863No Hit
GTATTGACGCTGCGCGAGCGCAGCCGGGGCGTGGAAGCGGAAGAGATACG11.36986301369863No Hit
GAAAGAAGACGATCCGAACTTCGGCGCGCAGGTCTGAAGACCTCGCTTCG11.36986301369863No Hit
GAGTCAACCAAGCTGACCAGGGCATTGTGGTGGGGCACAATGACCGATTC11.36986301369863No Hit
GGCTTTGCTTGAGTGCCGGCAGCAGCTTGATGCCGGTGGCGAGGATCAGT11.36986301369863No Hit
CGCCCAGTTGCTGCTGGAATTGCGCCCCGCCCCCCAACGTCCGGGCAAAG11.36986301369863No Hit
CAACAAGGTCGAGCAACTGCAGATCGAGCCGGTGTCGCAGGCTGCGGCCA11.36986301369863No Hit
GAAAACGACTGCGTGCGCGCGGTGACATCCGCGGCACGCATGAGATACGG11.36986301369863No Hit
GCTTGGCGGCGGGCTGGATGTCGAGCACCGTCTCGCCCTTGTCGTCCACG11.36986301369863No Hit
CGATGTCGGCAAGCACATCTTCATGGCCGAGACCATTCTGCAGCGATAGC11.36986301369863No Hit
GTCCGATAGCGGTTCGGCCAAGGCGTCGTAGATGCGCCGGTTGGCGCGGG11.36986301369863No Hit
GCCTCACTACGCTTAGTCATCGCGTCCTCTTTCGTAAGTTTGAGTTTTGA11.36986301369863No Hit
GGACTGGCCGAGAACGACATCAGCGGATCGTTCGCAGCAGTCGGAGAGCT11.36986301369863No Hit
GCTGAGAGTGCGAGAAACTCGATTTCTACAAGAGCCGCGTACATGACAGC11.36986301369863No Hit
CATCAAAGCCGGTGCGCTTGCCGTTTTCGACAAACTCCATCGGCGCGAAC11.36986301369863No Hit
GCATTGCCTTGCTCGATGAGCCTGGCCTTAGGCGATAACCTCGCTGGAGG11.36986301369863No Hit
GTGTAGGGGAGCTTGTCGTAGGCGCCCGGTTGGATGGCTTCCACAGCCTC11.36986301369863No Hit
GGCTGCGGCAGCATTGCCGGCCGACAGCATGGCGCCCAGATCGTTGGCAG11.36986301369863No Hit
GTGTATCTCGATGGTTTTCAGTCCGTCGGAGAGGTCGAACACGCCCCGTC11.36986301369863No Hit
CCGTAGGCTGAAAGTTGCAAATAAAAAAATAAGAAAACGAGACAATGAGC11.36986301369863No Hit
ATATTCGTTTCTCGTATGAGGACGGTTGGCTGCAGATCGAGGATACGGGC11.36986301369863No Hit
CTTCTAGATCGCGGATCATGGAGTGTGGGCGGTCGTTGTTGCCGCGCGCT11.36986301369863No Hit
CGATAGCGCCGCGCGTTTTGGCGTGGATGCTTTTATTACTGGCGAAGTTT11.36986301369863No Hit
GTATTGCCTGAACGAGTGCTTCTGTATCAACGATGGGGCCTCGACCGACG11.36986301369863No Hit
CCGTAGGGCTGCTGCTCTTCATCGTGATGATGGGCGCGATCGAGCACGTG11.36986301369863No Hit
GTGCTGGTGACCGCTTCTGCGGAGGAGGCCGTGCGCGATGTCGACTTCAT11.36986301369863No Hit
GGTCGGTGCCAAAGCCGCCCGCGTAGCCCTTGCTGGCGGGGGCGTTCTCG11.36986301369863No Hit
GGAGTGGCGCATCTGCCGCGCCACCGGTGATGCACTCACCAAGCTGGCCG11.36986301369863No Hit
ATTCCAGATGGCCATCAAGGGGCTGGAGATCGGGCAGCAGACCATCGACA11.36986301369863No Hit
GTTCTGGCTGGTGCCGCCGCTCGTGCTGGTGCTGCCGCCGCTGATCTGGG11.36986301369863No Hit
ATGTTCTCGGGCGTCATCGCAATGAGGAGCAGCAGGGTCGGTTGCATGGG11.36986301369863No Hit
ATCCATACGATCGCCTTCACCACACGCAATGGCTTGGGCGGCAACATCGG11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)