FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627096

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627096
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACAGTACTCGACGTTGCGCAACAGTTCGCCGTAGGTGTTGGGCTTGGC22.73972602739726No Hit
GCGACATACGGGCGTGTCGTCATTTGTGAAGAAGCTGAACCCCGAATACC22.73972602739726No Hit
GTGGAGCTCGGCGGGCGTGGTCACGCGGCATCTGGAGGCGGCGCGGGGCT22.73972602739726No Hit
ACCAGAGATTTCGCCGGGGAGTTCGGATCGGCGCTTACCCTTGCAGACCG22.73972602739726No Hit
TTCCTGCCGATTCAAGCGGCCGACGTGCGGCCCGTGTTCAACCATCCGAA22.73972602739726No Hit
GTGCAGCGGCTGGTGTCGTTGTTGCGCGCGGGCGGCACGCTGTATCTGAG22.73972602739726No Hit
GCCTTCGCGCGCGAACAGGAGCCCCGCGACAGGGAGGCCTATGCCTATGC22.73972602739726No Hit
GCCAAGCCGTTACCGCCAGCGGCAAAAACGTGACCATCGCGGGCTCACTG22.73972602739726No Hit
GCGTTGAGGATGGCGATGTCGAAGGCGTCGAGTTCGAGCGATTTCTGTGG22.73972602739726No Hit
GAACTTCTGGGCCGGCACCATCGGGTCGTACCAATACAGCACCTTGCGCT22.73972602739726No Hit
CAGGATGCGATGCCCGGTCCGTTCGGTGAAGGCGCGGTGATCCTCGGCCA22.73972602739726No Hit
GTCATCGCCCACCGCCTCGCCACCGTCCGCGCGGCCGACCGGATCGTCGT22.73972602739726No Hit
TTGCCGTGCCAAGGGGCTTCTGTCAGCAGGCGTTCGGCCTCCGGTGTGAG22.73972602739726No Hit
GACGACAGCGGACGCTTGCCCGGGGCGATCGAGTTGGCCTCGCCCTGCAC22.73972602739726No Hit
TCCTTCATCATCGCAAACGTCCCGTTGCCCATATCGCGACGATACGTCTG22.73972602739726No Hit
CCTTGTCGGCGCAACTGGGCCTGAGCTGGGTCACCGCACAACCTGTCACG22.73972602739726No Hit
CCTCAGGTGCTTGCCAAGGTCCTGCAACATCTCGGCCACGCTGACTGGCG22.73972602739726No Hit
ATATGGGCAGCTGTCGCGGCACCCGATCGCGGTTGATGCATTGCGCGGCA11.36986301369863No Hit
CTACGGCATCTTCAACGGCCGCAAGTGGCGCGAGCGGATTGCGCCGGTGG11.36986301369863No Hit
GCTCGACGTCCGTCAGCCGCAGTGCCTTCATGCGCAGGATGACTGCCGCC11.36986301369863No Hit
GCCATCGCCTTGGGGGTAGCCAACGGCCTGGACCCCAAGGTGCTGTCTGA11.36986301369863No Hit
GCCACAGTCCGGGGAGCGGACGTGGGGCTCAACTCCCGCCGAACCAGTTG11.36986301369863No Hit
AAACAACAACAGCAACAGCACCTTCTTCAACCCCTCCCGAAACCAGGACG11.36986301369863No Hit
CGCCAGTCGCCAGATCCTGTCCGTTTCTGGCTAGCCAGCGTCACCGGCGG11.36986301369863No Hit
GGACAAAGGCGGTTTCGGCGGCCTGTTCGCGCCCAAGCGCAAGACGCTGA11.36986301369863No Hit
GCGCCCGCATGGCGCGACGTGATTGGGGAGGAATCACCCATGAGCTTGCT11.36986301369863No Hit
GAGACCTTCGGGTCTGCCGGTAGCTGGGATAGGGCCGGTCTGCTAACGCC11.36986301369863No Hit
TCCCACTTCTTGACGATGAACGCTTGATGCTCCGGCAGTACCGCCGTCAC11.36986301369863No Hit
ATCACGCTGCCCGTCATGGCGTCGGTGGTGGGCAGCTTTGCCGTCATCAC11.36986301369863No Hit
ATGTATATATCATTATAGTATCAGAGAAAATAGTTTCACTGCCCTCAAAA11.36986301369863No Hit
CAGCGCGGTCAGGGCGTCGCAGGCATCGTTGTCCAGCAGGCTCGGCAATA11.36986301369863No Hit
GCTCCAGGCACATCAAGGTCCGCGCAACCACGGACGCTGCCGACGTCGGT11.36986301369863No Hit
AGACCACCTCGTCGCCGCCCTTGCCGCGCGGCGGCTGGAAGCCCACCGCG11.36986301369863No Hit
CATCACATTGATGGCGCCTGCAACGCGCGTGCGCGGCAAGGAGCAGCGCC11.36986301369863No Hit
GTTCACGCCGGAGTTCCGCAACCGGCTGGACGCCATCGTGTCCTTCAGGC11.36986301369863No Hit
GTGTTGCCCGAAGGGCTCGAAATTATCGGCCACGAGGCCTTCCTTTTCGC11.36986301369863No Hit
TGCTTGGTATGTCGCACAACCCGCCAGCAGGGTGAAAGCAATCGGCAATG11.36986301369863No Hit
GGGTAGGTCTTGGCAACCTCAGCACCAACCGCCGTCTCACTGTTGTGGAA11.36986301369863No Hit
ACCTCTTACCGAAACCACGCGCGGCCTTATTGATGCTGACGCGTTTGAGA11.36986301369863No Hit
CGCTCATCCAGTCAGCCGCGGTGGCCATGCCGTTGAAGAACGCCGGCACA11.36986301369863No Hit
CGTTCAAGTGCATGCAGCACCCGATGCTCAAGCGTGAAGTCTGCGGCGCC11.36986301369863No Hit
GCCACAGCTCGTGCATGTTGCTGATTCCGCCTTCTTCGTTGAAGAGGCGG11.36986301369863No Hit
GGCATTGCCAGCCTTACCTCCTGTTCGTCCGTCCCCTCTTCCGGCCCAAC11.36986301369863No Hit
GCGCCCGCCTGGCGCGTCGTGATTGGGGAGGAATCACCCATGTGCTTGCT11.36986301369863No Hit
GCCCTATGCGGCGCCTTGAATTTTTGTTGCAAGGAGGAAAAAAGAAGGGG11.36986301369863No Hit
GTCCAGTCGACCCGTGCAAAGTCTAACAACATTGCTCGTTTTGAGATAGG11.36986301369863No Hit
GATTCCGGCCGGCGCGGTGCATGACGCGGCCGTTCATGGGGATAAGCCTA11.36986301369863No Hit
AGCGTGCACAGCCGTCATGCCGAGTGCGTCTGCGATTTCTTCCTGCGTCA11.36986301369863No Hit
GCACTGCTGTCCGACTACCGCAACAACTACCACCAGCAAATGCTGAGCAC11.36986301369863No Hit
ATACCAGGACTAATGCACCAGATCCCATCAAAACTCCGACGTTAAGCGTG11.36986301369863No Hit
NGCAGTCTGTTCTGCGGCCCGCGGCCATGCGCCTCCTGCCGCAAAGTCTA11.36986301369863No Hit
ACTACCGGCAGGCCGTCCACACGCTGACCGAGCTGGCCATGCAAACCGAC11.36986301369863No Hit
ACTGGTCAGCGAAACGCTGGAAATGTTGCAAACCTGCTATCAGCAGTTGG11.36986301369863No Hit
GGCGTACCTGCTGCAGCAGTAACAGCAGTAACGCTCCCCAAGGCCGGTGC11.36986301369863No Hit
ATAGTCATCGCGCCGGTCGACCGCAACCACCTACGCTGGTCAATTTTGAT11.36986301369863No Hit
GTCTGCAGCGCCTTCAGGCAGTAATGCGTGAACCACAGCGACGAGAAGGC11.36986301369863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)