FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627108

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627108
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGTAGCCGCTGGCCGGCGCGCAGCAGGAGCGTCCGTGGCCACTGAACTG42.3391812865497075No Hit
GTCATACACCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAA31.7543859649122806No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTA31.7543859649122806No Hit
GTGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGG31.7543859649122806No Hit
GCTTTATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTG21.1695906432748537No Hit
GGTGCTGAGCCTGCATCTCGCCCCTCTGCCTGGCCCAGCTTAGACGTAGG21.1695906432748537No Hit
GTGCACATACATTCCCCTGCCTTCACAATGATCTCATTGGCCATTTGCTT21.1695906432748537No Hit
GCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAG21.1695906432748537No Hit
CACGGAGATGGTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCAAC21.1695906432748537No Hit
CACCACCACCACCACGATAAGAAGGCGTTTCAGGTGCACTGGGCAGCAGG21.1695906432748537No Hit
GAGAAAACTTCTTTTAAACCTCACCTTTGTGGGGTTTTTGGAGAAGGTTA21.1695906432748537No Hit
CTGCTACATCATGAAGATAGCTCCAGAGAGCATCCCCAGTCTTGAGGCTC21.1695906432748537No Hit
TTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCC21.1695906432748537No Hit
CCCATCCTCTCCCCAAGCTCCCATTTCTCAAGGGCTTGTCCCTGCGGTGT21.1695906432748537No Hit
GCAGCTGGGGCGTGTGCTGCTCCACAAATTGCTTGCACTTTTCCCTGTCC21.1695906432748537No Hit
GTAGTGACACCACGAGGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTA21.1695906432748537No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGA21.1695906432748537No Hit
ATGTAGCAGCAGGTGCCAGGGGCTGGCTTGTAGGCGATCAGCAGCTGCTG21.1695906432748537No Hit
CCGCTCTACTACATCTAGGACGCCTCCGGTGAGCAGGGTCAGTGGAAGCC21.1695906432748537No Hit
GGTGGGGGGGGCACTGTCTTGTACCCGGGAGGATGCTTAGCAGCACCTCT21.1695906432748537No Hit
GTGAGGGAGGGTCAGTTCACAGGACGAGTGGGAGGGCAGAGAGCTGGGAG21.1695906432748537No Hit
GGTCAGGATTTTGCAGGTCCACTGCGAGGTGAAGGGCAGTCCGGCCATTA21.1695906432748537No Hit
CATCTAGGACGCCTCCGGTGAACAGGGTCAGTGGAAGCCCCAACGGGAAA21.1695906432748537No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA21.1695906432748537No Hit
TCTTGCCCGTCTGCAAAAGCTGCAAAAGACCCTTTGCCCGGGGCGTTTCC21.1695906432748537No Hit
ATCTTGCTGCAGGTGCTATGCTCTCCTCTCCTCCCATGTACTCTGCGTTG21.1695906432748537No Hit
GTACTCTCTTAAAGAAGGTGGGGAGCTGCCCAGGGCAGAACCCACTGGTG10.5847953216374269No Hit
GTCCAGCCAGGAGCCAACACAGGCCTGGAGCATTGCCTGTGGTATGGCCT10.5847953216374269No Hit
GAGTCATCAGCACAGGGAGTCCCTGATCAGAGTTGGGGCTGTCTCTTATA10.5847953216374269No Hit
GGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGC10.5847953216374269No Hit
AGCCAGCCCCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGC10.5847953216374269No Hit
GCACCAGACTTGCCCTCCAATGGATCCTCGTTAAAGGATTTAAAGCTGTC10.5847953216374269No Hit
GCCCAGGGATGCGACAAGTGCGAGGGGCCAGGCCAGCAGCATCATGGCAG10.5847953216374269No Hit
CACTTGGATAACTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCT10.5847953216374269No Hit
ATTCTGTTGTGGCAGGAGTTCCCGGGCCCCTGGGCGCCACCTCTGCCCAC10.5847953216374269No Hit
CTATTGCTGGCTCTGCAGGGCTCTGATCAAGCGGATCCAAGCCATGATTC10.5847953216374269No Hit
GCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCATC10.5847953216374269No Hit
GGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACCGCG10.5847953216374269No Hit
AGAAAGGGCTTTCAGTTATTATGGTCCTTTAAGAACTGTATGGATTGCGA10.5847953216374269No Hit
TTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAAT10.5847953216374269No Hit
AACTGCTTTTGATCTTTTGATTCCTCTTGGGCTGAAGCAGACCAAGTTCC10.5847953216374269No Hit
CCACCACCACCACGATAAGAAGGCGTTTCAGGTGCACTGGGCAGCAGGGA10.5847953216374269No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.5847953216374269No Hit
GGTTTGCAATGGGAGTGTCAAGTCTGGTAAGTGATTATGGGGAAGAGTCA10.5847953216374269No Hit
GTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGAGCCAGAAACACAC10.5847953216374269No Hit
TCGCCACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCC10.5847953216374269No Hit
GTGGAGGGACAGCTGTCCAGATCTCCTGAGAGAGCATCAATGGGGTCTTG10.5847953216374269No Hit
GTCGACGCTAGCTTCGACATAGATCTGGATGACTCTAAGTCACAAACCGG10.5847953216374269No Hit
ATCTCCGTGTGTTTCTGGCTCATGTGGAGACCCATGAGCAGGGCTCCCAC10.5847953216374269No Hit
GTCCGGCGGGCTCTCCATCAGGACCTCTTTGCCTGTCTCTTATACACATC10.5847953216374269No Hit
GGTCACGGACATGCAGAGGTGGCACTCAGAGTCTCGCGGCAGCCATTCTC10.5847953216374269No Hit
GCTCATTAAATCAGTTATGGTTCCTTTGGTCGCTCGCCTGTCTCTTATAC10.5847953216374269No Hit
GTATCACCCAGGCTGCAGCGCAGTGGCGTGATCTCGGCTCACTGCCTGTC10.5847953216374269No Hit
TGGAATGCTCTCTGCAGGCCAAGCCCGCAGTGCCTACGTCTAAGCTGGGC10.5847953216374269No Hit
CTCCCAAGATCCAACTACGAGCTTTTTAACTGCAGCTGTCTCTTATACAC10.5847953216374269No Hit
CCGCGAAGGGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCA10.5847953216374269No Hit
AACGCAGAGTACATGGGAGAGTCACTCCTGCCTTCACCATGAAGTCCAGC10.5847953216374269No Hit
AACACGGGAAACCTCACCCGGCCCGGACACGGACAGGACTGTCTCTTATA10.5847953216374269No Hit
CACCCAGCCACCCGAGTAAATGAGAATGATGACTGACTGAGACCCTGATG10.5847953216374269No Hit
GCATGAAAGAGCGTGGGAGAGTGCCCTAAACTTGAGGGCGGAGCAACCTG10.5847953216374269No Hit
GTCATCCTGCTCGACACGCTGCTGGGCCGCATGCTGCCCCAGCTCTGTCT10.5847953216374269No Hit
AGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCG10.5847953216374269No Hit
ACGCAGAGTACATGGGAGGAGAGGAGAGCATAGCACCTGCAGCAAGATGG10.5847953216374269No Hit
GAAATAACAAAAATCAAAGCAGAAATAAATAGAACTAAAACAAACAAAAA10.5847953216374269No Hit
GCCCAGGCTGTAGTGCAGTGGCTCAATCATGACTCACTGCAGCCTTGACC10.5847953216374269No Hit
GCCTGATTGAAAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.5847953216374269No Hit
GTCATTCTCCATCCAGCTTTGTTCCGTTGCTGGTGAGGAACTGCGTTCCT10.5847953216374269No Hit
GCCCACATCCATCTTGCTGCAGGTGCTATGCTCTCCTCTCCTCCCCTGTC10.5847953216374269No Hit
GTGGAAGCCCCAACGGGAAAGGAAACGCCCCGGGCAAAGGGTCTTTTGCA10.5847953216374269No Hit
TCGTTGATCTGTTTCTTGGCCTCTTCGGTGTCCCCGAAGTTGACAGTGAA10.5847953216374269No Hit
CCAAAATGGGACACAGTAAACAGATTCGAATTTTACTTCTGAACGAAATG10.5847953216374269No Hit
GAGTCAGTGATCTTGTACCAGGCCCAGTCAGTGACAGGTGGCACGGACTC10.5847953216374269No Hit
GTAATTGAGCATCCGGAATATGGAGAAGTAATTCAGCTACAGGGTGACCA10.5847953216374269No Hit
GGCTTGGCCTGCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTTCTAGT10.5847953216374269No Hit
GTCTTGAGGCTCTCACTAGAAAAGTCCACAACTTCCAGGCCAAGCCCGCA10.5847953216374269No Hit
GAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTCGGGGG10.5847953216374269No Hit
GGTTTAGACGTCCGGGAATTGCATCTGTTTTTAAGCCTAATGTGGGGACA10.5847953216374269No Hit
CAATTCTCCCTGCGTCATGGATTTCAAGGTCTTTTAATCACCTTCGGTTT10.5847953216374269No Hit
GGCAAGGGGCGGGGACGGGCGGTGGCTCGCCTCGCGGCGGACCGCCCGCC10.5847953216374269No Hit
TGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCGCATC10.5847953216374269No Hit
GCTCGCGTTACTGCCAAGCGAGCGTGGTGTGGTGCCCCCGACCTACAACT10.5847953216374269No Hit
GGTCTTTGACGGAGTTAACGCCGCCTTCCTCGTCGGCGCCATGCCCCGCA10.5847953216374269No Hit
GTAGGTAACTCTGTTGACATCAGCCCCACACTTCAACAGGAGTGACACCA10.5847953216374269No Hit
ACCTGCAGGCGGCCCAGCTTGTCCACCTGCTCCTGGAAGGCGCGCACCTG10.5847953216374269No Hit
GCTACAGCCAGACATAACACCTTCTTCATTTGGAACTTGATTGTGGCTGT10.5847953216374269No Hit
AATGCCATGACTGAAGAATTAACAGCCACCCCTCAGGCTGTCTCTTATAC10.5847953216374269No Hit
ACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCG10.5847953216374269No Hit
CCTCCGGAGGGTGCTGAGCCTGCATCTCGCCCCTCTGCCTGGCCCAGCTT10.5847953216374269No Hit
CTCCAGAACCATCTCCGTGTGTTTCTGGCTCATGTGGAGACCCATGAGCA10.5847953216374269No Hit
GCAGGTGCCAGGGGCTGGCTTGTAGGCGATCAGCAGCTGCTGGTAGTCAT10.5847953216374269No Hit
CTGTGACCCCATACATGGGCCTGATGGTGCCGAAAGGCCTGGCGTGAGCA10.5847953216374269No Hit
CCGTTCCCCCAAATTTCACTTGGAGATTAACCCATCTGATGTAATCAGCC10.5847953216374269No Hit
GTGCCCAGGGCCCTGAGTTCTGGTGCCAAAGCCTGGAGCAAGCATTGCAG10.5847953216374269No Hit
GATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACCTGTC10.5847953216374269No Hit
TCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTTCCGAGTAGGTGGGATT10.5847953216374269No Hit
CGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCC10.5847953216374269No Hit
AAGCAGCTTCTTGCCCGTCTGCAAAAGCTGCAAAAGACCCTTTGCCCGGG10.5847953216374269No Hit
GACAAACCAAGTCGGAACAGCAGATAACAATGCAGCAAGGCCCTGCTGCC10.5847953216374269No Hit
CAGCAACGCCTGGCCCTGAGTGAGCACCTGGTTACCACTGCCACCTTCTC10.5847953216374269No Hit
GGCTGACACCTTCACCAGTTCCGACACGGTGGTGAAGGGCATGAACTGCA10.5847953216374269No Hit
CTTCTTGCCCGTCTGCAAAAGCTGCAAAAGACCCTTTGCCCGGGGCGTTT10.5847953216374269No Hit
GGTCTTGAACGCCTGACCGCAAGAGATCCTCCTGCCTCAGTTTCCCAGAG10.5847953216374269No Hit
TCCGGGCCCTGCATGCAGCCATTGGGGGAATCCCCTTGCTGGCTGGGGAG10.5847953216374269No Hit
TTTCTGGCTCATGTGGAGACCCATGAGCAGGGCTCCCACAATCACCACGA10.5847953216374269No Hit
GCTGGAAATGAGTGCATGGCATCAAAAATTAACACTGTCTCTTATACACA10.5847953216374269No Hit
CTATTTGGGCATCCTTCATGCAATGGATGGCTTTGTTGACCAAAAGAAGA10.5847953216374269No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG10.5847953216374269No Hit
ATGAAAACATTCTTGGCAAATGCTTTCGCTCTGGTCCGTCTTGCGCCGGT10.5847953216374269No Hit
ATCGTAGCCCCTATGAGAAGGTTTCTGCAGGTAATGGTGGCAGCAGCCTC10.5847953216374269No Hit
GTGTCGGGTCTGATGAACGTCGCCGCGGAGCTCGCCGAAAAGGTGGCCGC10.5847953216374269No Hit
GTCCTGTGGTGATTTGGAGGATCAGGCAGGCGCCAAGGCTGTCTCTTATA10.5847953216374269No Hit
AAATGACAGTGGATCATTTGAAGATGCTTCAGGCAACAGGGGCTGTCTCT10.5847953216374269No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATT10.5847953216374269No Hit
GACGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC10.5847953216374269No Hit
CCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAAGGA10.5847953216374269No Hit
ATGCTCATCTCCAGAACCATCTCCGTGTGTTTCTGGCTCATGTGGAGACC10.5847953216374269No Hit
GGTTTGCAAGGGGAGTGTCAAGGCTGGTCAGTGATTATGGGGAAGAGTCA10.5847953216374269No Hit
GGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT10.5847953216374269No Hit
GGCCAGCGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTC10.5847953216374269No Hit
GGTCCCTGGTGCCCGGGTAGTGGTCCAGATTCTCTTTATTCATCTTCGTA10.5847953216374269No Hit
GGCCAGTGGAGCCGATGGAGAAGGTGGCAGTGGTAACCAGGTGCTCACTC10.5847953216374269No Hit
GTCTCCACATGAGCCAGAAACACACGGAGATGGTTCTGGAGATGAGCATT10.5847953216374269No Hit
CACTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCC10.5847953216374269No Hit
GTCCGACTGCTCTGCCATCTCGGTTCGCCGCGAGCCAGGCCCCTGTCTCT10.5847953216374269No Hit
GTGCTATGCTCTCCTCTCCTCCCCCATGTACTCTGCGTCTGTCTCTTATA10.5847953216374269No Hit
TGCTGTCACAGTTATTACCATCCCCCCAGCTACCAAAATTACTACCAGAA10.5847953216374269No Hit
ACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCACG10.5847953216374269No Hit
ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGC10.5847953216374269No Hit
CCGCCACGGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAG10.5847953216374269No Hit
ATTACAGTGAGCTGCTGCAGGAGATCACAGACAACCTGACGAAGAAGGAG10.5847953216374269No Hit
GGGCCAACCAGCCCAGCCGAACCATTAACACCATCCCGGCCATCCACACC10.5847953216374269No Hit
CTCGCCTCTCTGCCTGGCCCAGCTTAGACGTAGGCACTGCGGGCTTGGCC10.5847953216374269No Hit
TTATTATGCTTAAATCATCTTTATTCAGCTCAGGAGTGGCTGTCTCTTAT10.5847953216374269No Hit
GGTGGCGGCGAACGCGGAGAGCACGCCATGAAGGCCTCGGGCACGCTACG10.5847953216374269No Hit
ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCG10.5847953216374269No Hit
GCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATC10.5847953216374269No Hit
CAAATGGCCAAAGTGTCGGGGAGAAGATTTTCAAGACAGCAGGCTTTGTA10.5847953216374269No Hit
GCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTTCTAGTGAGAGCCTCA10.5847953216374269No Hit
TCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTA10.5847953216374269No Hit
GCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC10.5847953216374269No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)