FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627169

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627169
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTGGCTCAGCTGGGCTCTCCTCGAGGGGCTGCGTGCCGCGGATCACC212.5No Hit
GTCCGAACCCGGGGCCCGACGTCAAGATCTCAACGGAGACTAATGGCTCA16.25No Hit
GTTCACCGTGACGATCCTGGCTATCTGGCTCGGTCAGATCCTCGGACCCG16.25No Hit
GCGCATGTGTGTGTCCGGCTGCCCGTATAAGAAGGTGTTCTTCAACCATC16.25No Hit
TCTGGGAATGTCATCGGGCGGCCGCACCGCACCGATGACGCCCTTGTTGT16.25No Hit
CTGGCGTAGAAGCCAGCGCTATGAAGACCCGCTGCCCGCCGATCTCGCCG16.25No Hit
GCTCTCCGACGCTCGCCCAACACAATCCGCGGTTACCGAGCTGACCTCAT16.25No Hit
GCGTAATCCGCGACGGCCATGAGACGCCCAGTGGGATCGACGGCACCGTG16.25No Hit
GGCCTCAGGGCGGATGACCTGCCCCGGATTGAGGGCATGGGCGGAGAGCA16.25No Hit
CGCCGATTCCAGCGAGATCTCGACCTCATCGGAACGTCCAATACGTGCTA16.25No Hit
ATGCCGTCGGCGTCACGGACCCAGGTGTGTGGTCCCGCCCCGATCGGGTC16.25No Hit
TCTGGGAATGTCATCGTGCGGCCGCACCGCACCGATGACGCCCTTGTTGT16.25No Hit
CTGCCGTGTCAAGCCCTGGTCTTCTCGCCAGCAGCTTGACAAAATAGGAG16.25No Hit
CATCTGGGTCGATCCCGGCGTCGAGCGCACAGCGTCGGAATTCGGCGATC16.25No Hit
GTGGACCTGCGTCGGACTGGCGAGTTGGCGCACAAGCTCGTTGAGGAACA16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)