FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627248

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627248
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGTCCTCATCGCCCTCCCATCCCTACGCATCCTTTACATAACAGAC29.523809523809524No Hit
GGTCTACCTGGCGCTGGGGGACCAGATGCTGAATGCGACAGTCATGAACC14.761904761904762No Hit
ATGTAATAGCTGCTGTTCTTTTTCTTTTCTCCAAAAAGCTTCCTGTTTTT14.761904761904762No Hit
GAATCAAAGTTGTCTTCTTCCTTTTGCTAGGAAATTCTATCAAACCAGGG14.761904761904762No Hit
GTGGATTTCATCCTCCTTATTGGCAACCAGGACCTCCAGGACCTCCAGCA14.761904761904762No Hit
GTTCTCACACCGTCCAGAGGATGTATGGCTGCGACGTGGGGTCGGACTCG14.761904761904762No Hit
ATACTGTACTTCATCTTCTGACCAACCATCTCCTTCGCAGAACTGATGAT14.761904761904762No Hit
GGGAGCAGATGATTTTGCATGAGCTGCTGGCATAGATACCTGGGCTAATG14.761904761904762No Hit
TATTTGAAGTTGATGTGGAAATTGCCAAACAATCTGTGACTATTAAGACC14.761904761904762No Hit
GTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCG14.761904761904762No Hit
TGTTTGAGCATCACATTGGTGCTCAAAAGGTTTTGGATTTTGAAGCATTT14.761904761904762No Hit
GCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCC14.761904761904762No Hit
GCTTTAATTTATTAATGCAAACAGTACCTAACAAACCCACAGGTCCTAAA14.761904761904762No Hit
CACCAGAGTCTCACCAAAGTCGCTTCTGTCGTCCGTGCCGTCCACCTGGT14.761904761904762No Hit
ACGGAGAGCTCTGCAGCCTGATGCCCCCAGTCCAGGACCCAGTGATCATC14.761904761904762No Hit
ACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATATGA14.761904761904762No Hit
GAATACAAATGCTCAGGTTTAGGAATGGAGGCATTGAAACACCCATGTAC14.761904761904762No Hit
CTACTGCACTCTCCATCCTGGGTGACAGAGCGAGACCTTGTCTCAAAAAT14.761904761904762No Hit
AAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCATGACCCGCCGGG14.761904761904762No Hit
GCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGATAACCTCGGGCC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)