FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAGACACCGTCCTTTAAAGTGCTGCAGTATGGCCAGACGTGGTGGCTC23.389830508474576No Hit
GCGTTTTCCGGGCGTAAATTGCAGGGCAAAGTCGCTGGCGGAAACTGGCT23.389830508474576No Hit
GAACAGAAAATGGACTAAGATACCATTTATTCAAAAAACTTTTACTGAGC23.389830508474576No Hit
GCAGTAGGTGTCACTATCGATACGGGCTGTATATCGGTAGCCCGTATCGA23.389830508474576No Hit
TTAAAAGCCAAATATATTTTTAAAAGATCATGCTTATAATAAGTAAATTA23.389830508474576No Hit
CGGCAACACCGTCGAGGTGAAGGGCGAAGTGGGCAACGAGCTGTCTCTTA23.389830508474576No Hit
GTCTTGAGGCTCTCACTAGAAAAGTCCACAACTTCCAGGCCAAGCCCGCA23.389830508474576No Hit
ACACAGGGTGCTCACGGCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGG23.389830508474576No Hit
GAGGTCAGGAGTTCGAGACCAGCCTCGCCAACATGGTGAAACCCCATTTC11.694915254237288No Hit
GTCCTGCCATGTTGTTGTCTGATCGATGTGATTTAAGAAGTATCTCTGAC11.694915254237288No Hit
CACCGATCCAATTGACGCCCCGCGATGGAATCGCGCCGATGACCTAGTTA11.694915254237288No Hit
TTTCTAGTATCTGCAAATGGATATTTTAAGCACTCTGAGGCCTACGGTGA11.694915254237288No Hit
GAGTACGCGTAAGCAAGGGGGACAAGCCGGTGACCTACGAGGAGGCACAC11.694915254237288No Hit
GGTCAGGAGTTCGAGACCAGCCTAGCCAACATGGTGAAACCCTGTCTCTA11.694915254237288No Hit
ATGGATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCGCCGGACTACTC11.694915254237288No Hit
GGCTTTTAGCGGGCGGCTCTGGGTCCCTCCTGGGGCCGGCTATGAGGTTG11.694915254237288No Hit
GTGTCAGAGACAGTCTTCCTGCCCAGGGAAGACCACCTTTTCCGCAAGTT11.694915254237288No Hit
CGCAGGATATGTTCGGCCTGGGCGGGCTCGGTAATCATGCCCACGGTGCC11.694915254237288No Hit
TCGAGCGACAGCGACTGCACGGCGTCGAACACCTCGCCGTTGGGCAAGGC11.694915254237288No Hit
TCTTCCTTGCTTTAAATGTTTCCTGTCATTTCTCTGTTGAATTCCAGTGT11.694915254237288No Hit
CCATCTCAAAAAAAAAAAAAAAAGAACAATTGGAACCCAAAAGAAAATGA11.694915254237288No Hit
GTGTGGTGTTGAGAGGGGGCTTGTTGGTGGGGCTCACAAGGCGCAAGCCT11.694915254237288No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.694915254237288No Hit
GTACATGGGATGGCACATGCAGCGCAAGTAGGTCTACAAGACGCTACTTC11.694915254237288No Hit
CTACCCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGC11.694915254237288No Hit
CACTAGAAAAGTCCACAACTTCCAGATGGAATGCTCTCTGCAGGCCAAGC11.694915254237288No Hit
GCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCGTCTGCAAAAG11.694915254237288No Hit
GGTCAGCAACCTTGACCTTGGCCGTCAGGCAGGCCGACTCGGCAGCCATC11.694915254237288No Hit
TCATGATCCTCCCAGTCGGTGCAGCAAACTTCAGGGAAGCCATGCGCAGT11.694915254237288No Hit
AGTTAACAGTGAGGTTCCGCTCCTGGATGATCTCCTGCAGGGCATCTGCA11.694915254237288No Hit
TCATGATCCTCCCAGTCGGTGCAGCAAACTTCAGGGAAGCCATGCGCATT11.694915254237288No Hit
GCTGAAGGGCGACCAATCGCGCACAGGAGCCATGCCCATGTCCGTCAACC11.694915254237288No Hit
ATCCTATACTGGAGCGCCTGGCAGAGCAGATCGCGACCCTTTGTGCCACC11.694915254237288No Hit
TCATGATTCTTTCTAACTCTTCAAACTTCCAATCCACTGTTCCCCATTCT11.694915254237288No Hit
GCCATAGCTGGAGGAAAGCCATGACACCTACCACCCCCCAAGTCACTGAT11.694915254237288No Hit
CCATCTCAAAAAAAAAAAAAAAAGTACAATTGGAACCCAAAAGAAAATGA11.694915254237288No Hit
GTATTAGATTCGAAAGGACTGAAATCGAATGGAATGTAATCAAATAGAAC11.694915254237288No Hit
GTGCGGTTGCACCGTTTGAGAGCTCGAGAGACGGCAGCTTCCATATCGGC11.694915254237288No Hit
TTGATTGGCTCATCTGATCCGTCGGCATCATTCTGGAGAAATGTACTCAA11.694915254237288No Hit
TCAACGCAGAGTACATGGGATGACCCCAATACGCAAAACTAACCCCCTAA11.694915254237288No Hit
CTCCAGTGTATCCACAGCCCCGACCTTTGATGAGAACTCAGCTGTCCAGA11.694915254237288No Hit
GGCCGCCAACCCCGTGAACTATGGCCGGCCCTACAGACTTTCCTGCGTGG11.694915254237288No Hit
GGAGTACCTGAAGGTCACGCTCAAGGAAGTCTTCATCGCCATGGTCGGCC11.694915254237288No Hit
GGGGCGTGGCCAAGCGGTAAGGCAGCAGGTTTTGATCCTGTTATTCGGAG11.694915254237288No Hit
CTGTGTCTCAATGAGAAGCACCTTGGCAGCGTTCAGCACTTCTGAGGTCT11.694915254237288No Hit
CTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACT11.694915254237288No Hit
CTCCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGT11.694915254237288No Hit
GAATAAGAGGGTGAGATATTTCTTAACAACAACAACAACAACAAAAAAAA11.694915254237288No Hit
GTACTGCAGAACATGGCCGAGAAAACACTGGTTCAAGAGTGTCTTTGTCT11.694915254237288No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA11.694915254237288No Hit
GTCATCGACTACTTCCAGAACCAGATTGACTCAAACGGCATCTGTATGCA11.694915254237288No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)