FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627316

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627316
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACTGGATCCGCATGCGCTCCCAGGAGGGGCGGCCTGTGCAGGTGATTG27.6923076923076925No Hit
GGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTT27.6923076923076925No Hit
CGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCA27.6923076923076925No Hit
GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC13.8461538461538463No Hit
GCCTGCCCACTGGTCAGCCTTCAGGGACCCTGAGCACCGCCTGGTCTCTT13.8461538461538463No Hit
GTCCAAGCAGGGCCTAGACTGCGGCTAAGGCTAGGCTGGATTCTGTGCTA13.8461538461538463No Hit
ATCGCAGACGGTATCAACAGGAACATCCTCGTGTTAGATATTGAGGCTGC13.8461538461538463No Hit
GGGTACTTTATTGATGGTACATGACAAGGTGCGGCTCCCTAGGCCCCTCC13.8461538461538463No Hit
GTACATGGGACGCAGCCAACATGGCTCCAGTGGAGCACGTTGTGGCGGAT13.8461538461538463No Hit
GAAGACAGCACGTAGTCTGATACACAGGTGAATGATTTGGACAAAGAGAT13.8461538461538463No Hit
GTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTGGAATTCAT13.8461538461538463No Hit
CCACGGTAAAGGTCTGGCTCTGAAAATGCTTCTATGGCAAGAACTTTAGG13.8461538461538463No Hit
GTGAAGATGATTGACCGCACGCAATTGATATTAGATATTTTTGCAAAGCG13.8461538461538463No Hit
TGATGCTGCTTACATGTCTCGATCCCACTTAACTATCTTGGGCTGTGACA13.8461538461538463No Hit
GTCCCCCTGCAGCTAGTCCTAGTGAACCTCACCCCGAGGCCCTGCATGGG13.8461538461538463No Hit
CGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGCGATCGGCCCGAGGT13.8461538461538463No Hit
ATTCTCATGAACTGGATGGGGTGGAGCCTAGGATTCTGCATTTCTAACCA13.8461538461538463No Hit
AGCCTGGGGAGAGCTTTTGTGACAAGGTCATGAGATGGTTCCAGGCCATG13.8461538461538463No Hit
CTACATGGGGATGCTGGACGGCTCAGCCCCTGTTCCAAGGATTTTGGGGT13.8461538461538463No Hit
AGATTGAAGAGTTCAAATCTGACCAAGATGTTGATGTTGGATAAGAGAAT13.8461538461538463No Hit
CTGCACAGCCGCGTCAAGCTCATCTTGGAGTACGTCAAGGCCTCTGAAGC13.8461538461538463No Hit
TCTTTTCCCTATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGC13.8461538461538463No Hit
TATCAACGCAGAGTACATGGGCACCTTGGCTGCTGAGCCAGGAGCTAAAA13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)