FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627333

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627333
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCAAGGATTTCTACGTGGGTGACAAGGACGGTTACGTCAAGGCGCTGG45.555555555555555No Hit
ACCGAGCTGAGCGTGACCACCGCCACGAGCGTTGCAATCCATACAGGATC34.166666666666666No Hit
AAGTTAAAGTGAGCAGGTTGTGTGTGGACCCTGAGTGTGGGGAGTACTGT22.7777777777777777No Hit
GGGCAAGGGCGGTCAGGCGGCACCGGCAACTCCGGCCGCACCGGCCAAGC22.7777777777777777No Hit
CTGCACCTGCTTCGGATCCAGGCCCGGGCAATTGGTGTCCTTCTCTTCCT22.7777777777777777No Hit
CTTGGAAACTTCATCGTTAGCTTTCGACCAAAGGTCGATTACCTTGTTGT22.7777777777777777No Hit
GCATTGAGCTGCTCGGGCTGCTCGTTGACCCGCTTCACATAGAAGCGCGC22.7777777777777777No Hit
GCCGACCAGCTCGCGGATCTCGTCGTCGCCCAGTTGGCGGTCCATCCACG22.7777777777777777No Hit
CGTCGGAACCCTTGAAATTGGCCTTATTACATCGATTATCTCGGTACCGA22.7777777777777777No Hit
TCTCTGTTTCGATGCGCTCCTTCGCGCGGCGCAACTGATCGCGGGCGAAC22.7777777777777777No Hit
TGGCAGACCTGAGCACGCTCAACCGGCACATGGATTACTACGTCGAATTG22.7777777777777777No Hit
GGCCCGGCCCTGTTCGACATTGCCGCCGTCGAAGCCAAAGCGCTGCGCGC22.7777777777777777No Hit
GTACCTCACCGAGGCCGAAGGCGGCGGCGGTTTTGCCGAAGTCGCCGAGC11.3888888888888888No Hit
GACATGGGCGCCGCCCGAAAGCGGCGCCCCGATGTATGCACAATGCCCTG11.3888888888888888No Hit
GGCCCTGCCCGCGCCCGAACTGCCGGCGCTGTTTCATGGCGCCACGCCAG11.3888888888888888No Hit
GTCCGCGGTCGAGGGCCTGGAGCTGGCGACACCGGCGCTCAAACCCTACA11.3888888888888888No Hit
CCCCTAGCCCTGGGCAGTCACCGGTCTTGTTTCCTGTTCCTGTAGGTTTA11.3888888888888888No Hit
CCCAAGCACTACTCGCTCCTGGCGCTTGCCAAGCTGTTTGGCCGTGCCAT11.3888888888888888No Hit
GTATGTCGCCACGCGGCTCTACGCGCGTCGCCAGACGTACGACGATGTGC11.3888888888888888No Hit
ACTTGCCAGATGTGCCACGCCGCCGGTGTGGCCGGTGCGCCGAAGTTTGG11.3888888888888888No Hit
GCCTACCGCAAGGCCAAGCCGGAAATGCAGGGCATCCAGCAGATCCGCAA11.3888888888888888No Hit
CGAGCAAGCATGGCATGAACGTGCTGATGGGCGCGCCGAATATTGTGCGC11.3888888888888888No Hit
GCAGATGGCAGCGGCGCAGATTCAGGTCGCAGTGCGAGCTTGAGCACGGC11.3888888888888888No Hit
CCATTCACTATCATGAGAACAGCACAGGAAAGACCCCACCCCATGATTCA11.3888888888888888No Hit
GTGCTGGGCCTGATCATCAATCTCATCAGCATGCGCATGCTGTCCTCCGG11.3888888888888888No Hit
AACCGCTTTTTAGGCAAAAAAATCTAAAATAGCTTAAATCACATGCAGAA11.3888888888888888No Hit
GGCCGGCGTCGTGGCGGCGCCCATCGCCGGACGGCTGGCGGATCGCGGCT11.3888888888888888No Hit
TGCATGATGCGGCGCGTCCGGGCCTGACGCCCGCACTGGTCGCGCGTTTG11.3888888888888888No Hit
GTCTTTTTTTTTTTTTTTTTTTTTTTTTATACGGAGTCTCACACTGTTGC11.3888888888888888No Hit
GCCTGCGCGATTGCGAGGGCCAGCCGCTGCTGATGTATTCGCCATACGAG11.3888888888888888No Hit
TTGCAGCGCATCGAGCGCGGGCTGGGCGCCACGCTGTTTGCGCGCTCGCG11.3888888888888888No Hit
CCTCCACCCATCCCTCGTAACCCTCACCGCTGAAACCCTTCGAGACGGCG11.3888888888888888No Hit
ATGTGAATCGCCTCTTCGTCGACGTGAGAAATGATGAGGAACTTCTTGCC11.3888888888888888No Hit
CCGGAGAACCAGCCGGCCTTCCGCAGCACCGCCGCCAGGGCCGGGCTCGT11.3888888888888888No Hit
GCGCCTTGCCTTCCCGGCAGGGCATCCCAGACGGGGAACCCCAGTTCCCC11.3888888888888888No Hit
CGCCTGGACAGTGATTCAGCGCTTTCCTTGCGCTCGCTGTAACGATCCAC11.3888888888888888No Hit
TGGTACCTGTATTGGGGAAACATAGCATACAAGCAAGAAGCTTACAGCCT11.3888888888888888No Hit
TCAGCATTCTGGCTCGACCAGTGTTGCGCCAGGAATGCGGCCTTGTCGGC11.3888888888888888No Hit
GCGCTTGGCTCCGGCAAGAACGTGGTCGCCAATCTGGACGATGCGCTGCA11.3888888888888888No Hit
GGCTGGTGTTCGAGCCGGCCGCCGGCACGACGCTGACTGCGGCCGGTGCT11.3888888888888888No Hit
GTCGCCCCAGCGTGCGGGCGCACCGTTGTCGTGCATCTTGTCGGCAATGT11.3888888888888888No Hit
GGGGCAGCGCGCATGCCCGACGAGACCACCATCCTGCGCTTTCGACACCT11.3888888888888888No Hit
GGTTGACCCCGCGCGAAGCCGCTATGTTACCCGCTTGCTCTGACGGGGCG11.3888888888888888No Hit
GCCGTAACGCGCAAATTTCTCGACGGTGGTATAGAAGCGGTGCCCCACCT11.3888888888888888No Hit
CATCAGCACCTCCCCGGCCCAGGGTGCAAGCTTGCTGCAGTCCGAACGCA11.3888888888888888No Hit
AATCTGAGCTCACAATGATTTGAACCTCGGGGTGAGGCGCCAGGATGTCG11.3888888888888888No Hit
GCGCATACGACAACTCGCCCAGCCAGACGGCGACGCGCGGCACGCGAAGC11.3888888888888888No Hit
GTCTTTTTTTTTTTTTTTTTTTTTTTTAGACGGAGTAAAAATATGTTTCC11.3888888888888888No Hit
CGTCAAGCGTCATCGTCCGCCCATCGTTGCCGCACAGTCGCGTGCGCGCT11.3888888888888888No Hit
CGCATCGACAACCTCAACCTGGGTCTGCAGACCGAGGCGCTCCACATTCT11.3888888888888888No Hit
GCCCGGCCGGTCTGCTGCAGGCATATCGTTTCATCGCCGACAGCCGCGAC11.3888888888888888No Hit
GGCCTGGTAGTGGCGCGTGGGCGCGCTATAGATCTGGCGGTCACTGGTCT11.3888888888888888No Hit
TCCTGGAGATCTTCCAGAAGGGCGCCCAGCGCCACATGACGGCCGAAGAC11.3888888888888888No Hit
GAGCGATGATAGTGACATCGACGTTGCCAAGGGTATAACCCTTCGCCTGA11.3888888888888888No Hit
ATGCAGAACTGGTTCAGCTTCAGCGATATGGCAATGGAAGAGGCGCTGAT11.3888888888888888No Hit
CGCGCAAGCATGGCATGAACGTGCTGATGGGCGCGCCGAATATTGTGCGC11.3888888888888888No Hit
CCAATGACGAGGCGCTGCGCAACTTCGCCGGCGACGCCATCAAGAAGACC11.3888888888888888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)