FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003627472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTCATTATCACTGTCTCCCAGGGTGTGCTTGTCAAAGAGATATTCCGCCA210.526315789473683No Hit
CCTCAAGACCATTGCACTGAATGGTGTGGAGGACGTGCGAACCGTGCTGG15.263157894736842No Hit
GCCGCGGTAATTCCAGCTCCAATAGCGTATATTAAAGTTGCTGCAGTTAA15.263157894736842No Hit
GGATCTCATCCGCGGTCTGCGGCAGCGACTCCCCAGATGGCAAGTAGGGA15.263157894736842No Hit
CTACGGGGTTGGTGAGAGCTTCACAGTGCAGCGGCGAGTTGAGCCTAAGG15.263157894736842No Hit
CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAAT15.263157894736842No Hit
GTGTAGTAAGGGTGGAAGGTGATTTTATCGGAATGGGAGGTGATTCCTAG15.263157894736842No Hit
CCATGATTCTGATCAGGACCTTATCTCGCGTCCCCTTGCCCTTCATGGAG15.263157894736842No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCC15.263157894736842No Hit
CATCAAGCCCAAGAAGCTGCTGAACCCCGTGAAGGCCTCTCGGAGTCACC15.263157894736842No Hit
GTCTGGATGATGCTCCAGGCGTTGGTGAGGCCCACGTTGCCCTGCGTGCC15.263157894736842No Hit
GTCCAGCCCAGGCCTGCCGGAAGGGCCGCCCTGCTGTGTCCCTGCGAGAC15.263157894736842No Hit
GTTCCAGCACTGTCTGGTGCTGCATCGCAGAAACCTGAAGATCTGGGTCC15.263157894736842No Hit
CTTACCATCTTTATGGTTCGCATTCATATAATAATCCTTGCTTTCCTTCT15.263157894736842No Hit
GTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACTCGTGCGCCTCGCT15.263157894736842No Hit
GCCTTGGCTTCCTGGGCTCAAGCAATCTTCCCACCTCAGTATTTCAAGTG15.263157894736842No Hit
TAATTCTAGAGCTAATACATGCCGACGGGCACTGACCCCCTTCGCGGGGG15.263157894736842No Hit
CTTACCATCTTTATGGTTCGCATTCATCTCATAATCCTTGCTTTCCTTCT15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)