FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCACCTCCAGGCATTATGGCTCCTCCACCTGGTATGAGACCACCCATG210.526315789473683No Hit
AATCAGCTTTTTCAGATCCATGCGCGGCAACGCAATTGCATTCAGGTTTC210.526315789473683No Hit
CTACCCGATTTTGACTGGGCACGTTATACCTCTGGCATCGTGCTAGCGTT15.263157894736842No Hit
TTGTTAATGATTTTGCCTACATGAAGAAGAGAGAAGAGGAGATGCGTGAT15.263157894736842No Hit
GTACGAGCCCCTGAACTTCCACGCCATGTTCCAGCCCTTCCTTGAGATGA15.263157894736842No Hit
ATGCTAATAATTAGGCTGTGGGTGGTTGTGTTAATTCAAATTATGTGTTT15.263157894736842No Hit
CTAATAACTGTCACCTGAACCAAGCCTTATAAACATTGTTCTGTCTATTC15.263157894736842No Hit
GCCCTGACCGACCTATGCGCTGACTGTGCGGTTCGTGACCGCTCATTGTG15.263157894736842No Hit
CGATTAACAGAGTCGAACTCATGCAAGATCCTTCGTGCGGGCCGTAACGC15.263157894736842No Hit
ACACCGGACCTGGATAACGCCACGCCGCGCCTGGCCAATACGCCCGACCC15.263157894736842No Hit
CCCCCGCGCCACCCGCGCCGCGAAATGAGGTGGTGGCTCCGTTCGCACCA15.263157894736842No Hit
GGTAGAGCCAGAACGGGCTGGTGGCGATCAGCGCCGCGATGCCGCTGAGC15.263157894736842No Hit
GAACTAGCAACGACCATCAAGTCTGGTGACAAGGTCGAAGTTGAAGGTCA15.263157894736842No Hit
GTTGGGGGTAATGCTAACGTCACCCTCACAGGGATGGCCACGGGGACTGT15.263157894736842No Hit
GGGCTCGGGTTCGTGGTGATGGACGAGGTGCACTACCTCGCCGACCGGAT15.263157894736842No Hit
GGCCCGCTGTCCGTGTCGGTGTTCGCGGCCACCAAGGAGGAGGCGCAGCT15.263157894736842No Hit
ATGCTCGTGTGTCTACGTCTATTCCTACTGTAAATATATGGTGTGCTCAC15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)