FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003627678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGACGTACCTCACCTTCACCATAGCTCTTTACAAGGTCGAAGCGGCGCC210.526315789473683No Hit
GCATTGCAGGGGAAAAAGTGACTGAGATGGATCAACAGTATGCTAAGGTC210.526315789473683No Hit
GCTGTTGGTAGGATGCCTTAGGCCAGGTACGTCCCAGCGATGTTCTGCTG15.263157894736842No Hit
ACCGTCCTCCCCGCTCCGGTAAGGGGCGGGGGATCCCAGCTTGCCGTCCG15.263157894736842No Hit
CAGAAAAAGTGGGCATTAAAGGGTATCTGGCCTTTTTTCTCACCATAATC15.263157894736842No Hit
GGGGTCCGGCCCTGGGAGCCGCGTTGACCTCGCCCCCGTTGTCGGTCGGT15.263157894736842No Hit
GTTGAAAATTAGGTCTGAATTCAAGAGAAAGTACGGCAAGTCCCTGTACT15.263157894736842No Hit
CTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGA15.263157894736842No Hit
GTCCGGCAGACTGCCCAGGCGCACCCGGTTGGATGGCGCATCGGCCACGC15.263157894736842No Hit
CTTCAGCACGCCGTCCAGCAGATTGCCGCAGATCACAGCTTCATCCCCCG15.263157894736842No Hit
CCAGGGCATAGTTGGCCCCCTCACGAGCCAGATTCCTCAGCAGGTTATTG15.263157894736842No Hit
CCCGCAGCCAGCGGGCGTTGCGCAGGGCATACCATGCCCAGCAGACCACG15.263157894736842No Hit
GCAAGATGGCGCTCGCCGACCACCTCCGCGAGCTCCGCGCCCGGCTGCTG15.263157894736842No Hit
GTCCACAGACAAGATCTCCCGGCACTTGTCACACTGGTCCTTCATCCGCA15.263157894736842No Hit
GCCTTAAGTTCCTTGAAGGCAGGGGGCCTGCCTTTGGCTTGGTGGTCTCA15.263157894736842No Hit
GCCTAGAAGGAATAATACTATCGCTGTTCATTATAGCTACTCTCATAACC15.263157894736842No Hit
CTGGAAATGACACCGCGTGGTTTGTTAAGTAGATAATAGACCTTTTCTTC15.263157894736842No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)