FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCGCCAAGCGGCTCGCCGATCAGGTCCGTGAGCACGTGCGGGCGAACTC417.391304347826086No Hit
TGCCGCAGCTCACTGATCTGCTGGAAACCGATCTCGGCCCGGCCTGCCGC313.043478260869565No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG28.695652173913043No Hit
TTCCAATAATTCGCGTCTTATCGCATGTTCAGGCGCTTCGTCGCCGTCAA28.695652173913043No Hit
GCTTGTTGGCGGCACCGGCCTTGGCGGCCACCATCCAGCCGTCACCTGCC28.695652173913043No Hit
CCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAACAC14.3478260869565215No Hit
CACCGAGTACTTGCGCTCTGGGGGTGCGATGATCTTGATCTTCATGGTGC14.3478260869565215No Hit
CGACAAACTGGACTTTTTCTCCCTTGTTTAAGGCCCTCGTAATTTCTTCT14.3478260869565215No Hit
GAGTAGATCCCAGCATCTGGGCCATGGAGAGGTTGGGGCAACAGGTTATT14.3478260869565215No Hit
GTTCAGCAGGCAGACCGAATGCATCCCACCCCATTGGATGCAGCACGTTG14.3478260869565215No Hit
GATATTGAGCGCGTCGAAGACCTTGGCCTGCACCTCGGCGCGGTGGATAC14.3478260869565215No Hit
CTTCGAATGTGTGGTAGGGTGGGGGGCATCCATATAGTCACTCCAGGTTT14.3478260869565215No Hit
TCCCGGCACTTGTCACACTGGTCCTTCATCCGCAGGCAGCCCGTGGAGTT14.3478260869565215No Hit
CAACCGGCAGGCCAATCTTTTCGAACAGGATCACACCCAGTTGTTTCGGG14.3478260869565215No Hit
AAACGCGACAGCGGGTGGAATTGGTGGAAGAAGCGCGGGAGGAATTTTTG14.3478260869565215No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)