FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003627775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGACACCTACTGCACAGAGCACGAGATCGACGTCGTGGTCGCCAACCCGA27.4074074074074066No Hit
CCCCGGGCCGAGGTGATCACGGAGGCGCACCACAGCGCCATGCGCCGGTC13.7037037037037033No Hit
CATCACTTCTATCCTTTGTTTTCCTGTCAGTGCTTATTTGATTACAGACA13.7037037037037033No Hit
AAATATTGATTACCATAAGCAGACTTCCACATCTGATCCATGAGCACTGA13.7037037037037033No Hit
ACCCGATCCCACCATGGAGCAAGCCTTTATTCAGTTGATCCACGACTGGG13.7037037037037033No Hit
CCCCGGCACACACACTTCGCGCGCCGCACACCTGCTCCAGCGCGGGTGCG13.7037037037037033No Hit
GCGGTCCCTTCGTCAGACACGGGCGAGGGTCCGGTCCAGCCTAGCGGAGG13.7037037037037033No Hit
CAAGGAAATTAAATAAGGCAAAATTCTATTTAAAAATGAAAGATGAGACA13.7037037037037033No Hit
AAATTAGATTATCTACCTTCTCCTTTACAACAGTTACGTTTCCGAATGTG13.7037037037037033No Hit
GTCATCGGTGGTTGCCGCATGGTTGAGCATCTGGCTGGTGTACCTGATCG13.7037037037037033No Hit
GAGTGCGCCGACCTCCACCTCCGGGTGGGCCGTGAGCAGGCGCAGAACCT13.7037037037037033No Hit
ATTTTTACCTGTTACCGGGTAACAACTACATAGCGCGGAACGTATGGACA13.7037037037037033No Hit
CTCAATACATCGACCGAAGCCTACTCGCCGTCCTCGGTCCTGCGGACCGG13.7037037037037033No Hit
CTGCTGGTATTCTCACCAAAGAAATGGTGAAACAGATGGCTGAGAACCCT13.7037037037037033No Hit
ACACGATCCCACCATGGAGCAAGCCTTTATTCAGTTGATCCACGACTGGG13.7037037037037033No Hit
TCTCATCGGCGGCCGGTCCGCCTTCCTGTCCGTATTCTGGTCCGCGGTCG13.7037037037037033No Hit
ACGATGTGCTGGTGCGCCAGGACGACCAGTGGCTGTTCAAGCAACGCCTC13.7037037037037033No Hit
CCAATGACCATAACTGCGGTGCCGACGCATATCGGAACTACCGCGGAGTC13.7037037037037033No Hit
GAGCCCGCCGAGTGCTGCCGCCTCCGAGCCGGTGCCAAAACCATAGCGCG13.7037037037037033No Hit
GCATATCGGAAAGCATTTCGCCTGGACACACCCAGCATGAAGGAATAAAA13.7037037037037033No Hit
GAATAACATAACATATTACTATATCAGTCTTTAAGTTCACCATTGCTAAA13.7037037037037033No Hit
CTTATACACATCTCCGAGCCCACGAGACTCCCTGGGTAGTATCGCGTATG13.7037037037037033No Hit
GCTTGCGGTCGTACCGCACTCGTATTAACAGATCGGCAGGATAGCCCAAG13.7037037037037033No Hit
GTCACAGCGATGGTCGATCGGGGCCATCTGCTCGTCACGCCAGGCGGTGG13.7037037037037033No Hit
GCCCATCTGGTGGCGGGTTTAACGCCGATTGAGGCCAACGGTTATCTCGA13.7037037037037033No Hit
GCTGTAGTCGGTCATGCTTCAGTCTGGAAAATCAGTTTTCTTTTCCTCCT13.7037037037037033No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)