FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003627797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences141
Sequences flagged as poor quality0
Sequence length100
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTGTCGCCCCACCTCGACGACGCGGCGCTCAGCTGCGGCGGCCTGATGC42.8368794326241136No Hit
CCTCGGGGATGAGCTGAAAAAGGACCTGAAGCGGGGGCAACGCCTTCGGA32.127659574468085No Hit
GGGCCGACCCCGAGACCCGGCTGGCCGACCTCACCGGCGACGGGCGGGTG32.127659574468085No Hit
GGATATGGAGTATGCGCTATTTGGACTAGGTCGCCACGCAAACGCAAAGC32.127659574468085No Hit
CAGGAGAGCTGCCTTTTGAAGCTTCTTAACTTCATTCTTGATTATTCTGT32.127659574468085No Hit
GATATTGGCTGCGGCATGATCGCGGTCAAAACGCAGTTCCAGGCCAGCGA21.4184397163120568No Hit
GTGCCAGACAACTGTCGCTCTTATTTCGACTCCATGCAGCATGTGCCTGC21.4184397163120568No Hit
GGCCAAGGGGCCGCTGCCCGAGCTGCTGGCGCAGCTGCAGGCCGAGCATG21.4184397163120568No Hit
AGACGTACCACAGGACCACGCGGTCGCCCTTGGGGATGACCTTGCCGCCG21.4184397163120568No Hit
ACATGGAGGACGGGGTTCTCGAGGAGGTATGAGATGTGGGTCGTCCACGT21.4184397163120568No Hit
GTATTCGAAGGCGGCGCTGCTGAAAAACTTTGCCTCGTATTTCGATGCGT21.4184397163120568No Hit
CCGCCCGCGAGCAGCTCGATGAGCGTGCTCTTGCCGGCTCCGTTCGCGCC21.4184397163120568No Hit
TCGTCCCCCTGCGGCGGCCCGCCGGCCCGCGATCTACCTCGGTGTCGCCG21.4184397163120568No Hit
GTGCTGGCACTGGTGCTCATCCTGGCCAGCGGAATCCAGCGCCGCGAGCG21.4184397163120568No Hit
GTGAATGACGGCGTGGAGGACCTCCGCTGCAAATACATCTCCCTCATCTA21.4184397163120568No Hit
CCTGACGGCCCGGGGCGGGGGCGCGAGCTCCCGCCCCGCACCATCACCCA21.4184397163120568No Hit
TCGCGGCGTCGTACCGCGACGCCGCCGCGATCGAGCGCACCGCGGCGGGC21.4184397163120568No Hit
CGCCAGTATTGTTTGGGCTAAGCAAAGACGAGTGTCATCCGTTTGCTTTG21.4184397163120568No Hit
TCGTTGACCTGGCGACGCCGTCGAGGAAGATCACCGTGGTGAACCCGTAA21.4184397163120568No Hit
CAGCCGCGCGGCGCCGTCCTCGGGGCCGATGTCGGCGACCCACGCGCCCA21.4184397163120568No Hit
GGTGAGCACCGCCCGGCCCGGCACGACGATGCAGACCGAGTCGGCGGTGT10.7092198581560284No Hit
GTCCTGCGCCAGCGCAGCGACGCCCTCGGCCAGCGGCGCTCGAGCCAGCG10.7092198581560284No Hit
GCACATCGCCTCGATCGCGCACGTGGCGGCCTTCGACGACGGCCGGGCTG10.7092198581560284No Hit
GGCCAGCGCAGCGAGGCCGCAGGCGGACAGGCCCGCCAGCACGAGGCGAG10.7092198581560284No Hit
GGCTCCTGCTCGCGACCGCGAGCAGGAGCCCGGCGAGGCGGCGGCGCGGC10.7092198581560284No Hit
GCGCCCGGCCGGTCGCGCATGACCGCCTGCAGCAGCGGCCACGCGGGCAG10.7092198581560284No Hit
CTTCAAGGCCGGCGTCGATTTCTCGGCCAGGACGCTGCTGGAGCTGTCTC10.7092198581560284No Hit
ACGCAGAACTGCTCGACCAGGTTGCCGCGCGGGTCTCGGACCCACAGCGG10.7092198581560284No Hit
ATATTCCGTCGATCTGTAATATCGTGTTCCTGCGCAAGGTACGCAGCCGT10.7092198581560284No Hit
AAGGGAACCTTCTTTATCTGCGCCCTATCATCATTCTTCTCTCACCATTC10.7092198581560284No Hit
CCCCAGAACAGCAATGCATTAATGACGAGCAGGAACAGGCCGAGCGACAG10.7092198581560284No Hit
CTCCTTAGTAGCTGGGATTACAGGCACACACCACCACATCCAGCTAATTT10.7092198581560284No Hit
GTAGTGGCCGTGTTCATTCGCATGCCGATCATGGGCTACCGCGATAGCGT10.7092198581560284No Hit
CCGAAGGTGAGGCCCATGAGCGAGAAGCCGAGCACCAGCATGGCCATCGT10.7092198581560284No Hit
TCACGCTCGCGCTGGTCTTCGGCGCGGTGCTGTTCTCGTCGATCGGCCCG10.7092198581560284No Hit
AGCCAGGACAACGGCGGCGAGGCGCTGCACCTTGGTGCGATCGGCTACGC10.7092198581560284No Hit
CGATCAGGATGCCGCCGTCGCGATTGCCGTCCATGTCAGCGCCTCCCGGC10.7092198581560284No Hit
TTTGAGTTGCGCGAGGCTGTACTGGGTGTGGCCGATGCGGTTGGCAGGCA10.7092198581560284No Hit
GCTGCGCATCGTCCGGGAGGGCGTCGACGTCGGCGACCACCAGCTCGTGG10.7092198581560284No Hit
GCTCGGCGTGCTCATGCTCACCATCGCGATCGTCGTCGAGCGACGGCCGA10.7092198581560284No Hit
CTTGGCGACAGTTCATCATTAAAGATGAGGAGATCAGCTTCAAGCTCTTC10.7092198581560284No Hit
ACAATGGCCACGTCGGTCTGGGTGTTAAGTGCTCCAAGGAGGTGGCCACC10.7092198581560284No Hit
CCCCAAGTCCGACCCGTTGGCCCAAGAGGCATTCAAAAAAACTTTGCCGC10.7092198581560284No Hit
GGGTCTTGACCGGGCAGCTGCGAGCTGCCCAGGCGTCGAGGAGGATCGGG10.7092198581560284No Hit
ATCGAGAACCTCGTGAAGGACAACGACCTCGACGTCGACTACGAGCGCTC10.7092198581560284No Hit
CTCCGCCGCCGGGCCTAGCTGGCGGGGGGTGGGAACGGGAATGACGATCT10.7092198581560284No Hit
ATCGTGAACCGCAACCTCGGCGGGATCGAGACGATCTTCATGCTGCCGAA10.7092198581560284No Hit
GGTCCTGGATGGTGAGGCCGGCGACGATCGCGATGACCTCGTGGGCGACG10.7092198581560284No Hit
GATAGGAGCCGAGCGACAGGTCGGGAAACTCGGCCGCGACCGCGCGCAGA10.7092198581560284No Hit
CTCCGTCACAGCTGAAGATATATCGGCTAATCCGATGACACCAAATATAT10.7092198581560284No Hit
GTGCGGGACCAGGACGGCGATCAGCCACAGCACCGTCGAGGCGCCCGAGA10.7092198581560284No Hit
GGGTAGATCAGGTCGGACGTGGTGATCGTGTTTTCGCGCATCAAGGCGCG10.7092198581560284No Hit
CCCCTCTTCAAGGGGTCTACATGGCAACTGTGAGGAGGGGAGATTCAGTG10.7092198581560284No Hit
CGAGATCGAGTGCTCGCTCGAGCGCCCGCCGAACAGCAGGGCGACGCGGA10.7092198581560284No Hit
CGCGTGAACTGCTTGGGTCGGGTCGCCGACGCGATCTCGCGCAGTGTGTG10.7092198581560284No Hit
GTGAGGACCCGCGCCATCCGCTCCCCGTGCGCATCGACGATCTGGCCGAC10.7092198581560284No Hit
CCGCCGGGTCGCTCCGGACCCGGTTGGGGACCACCGGGCTGCCGCTGCTG10.7092198581560284No Hit
GCTGGAACATCCGCCGCTTGCGGTCGGGGGTCATCGGGTCGATCAGGGCC10.7092198581560284No Hit
ACCCTGCGGAGCCGTGGTGGTCTCCAGGAGGGCGCCGGAGTCGGCGGCCG10.7092198581560284No Hit
GAACTACTTCCTGTCCAGGGAGATCGCCGAGGAACGGCGCCAGGTTGCCG10.7092198581560284No Hit
CTTCGGCTCGGTGATCCCGTCCGGTGACAACAAGTTCGCCGCGCTGAACA10.7092198581560284No Hit
GTTGAGCACCGCCCGGCCCGGCACGACGATGCAGACCGAGTCGGCGGTGT10.7092198581560284No Hit
GCTACGCCCTCGAGCAGGTCTACCGGGTGAGCGTGGCCGAGCTCGCCGAC10.7092198581560284No Hit
CTCCGAGTCGGGGGGGGGGGGGGGGGGGGCTCGCCGGCGGCGCCGGGGGG10.7092198581560284No Hit
TAACTACACGTGGCGCGTGCGTCCGGCCACCTCAAGCGACTGGTCGGCCC10.7092198581560284No Hit
AAGTCTGCAAGTGGATATTTGGATCTCTTTGAGGCCTTCGTTGGAAACGG10.7092198581560284No Hit
CGACAAGGTGGTGCAGGCGGCCTGCCCGATGGGCCTCGACGCGGGTTTCC10.7092198581560284No Hit
CTCCGCGACGGTGGCCAGCTGGGCAGGCAGGTCGCCACGGTGCAGCACGA10.7092198581560284No Hit
CACCAGGAACCGGGCGCGTAGTCCTTGAGGAAGACGCCGAAGAGGTCCTC10.7092198581560284No Hit
GAGCTGGGTGATGAGCGGGATCACCGGCCCGGGGAACCACGAGGACACCA10.7092198581560284No Hit
GTCGGGACGGCCGCCGTAGTTGCGTGTCTTGTCGGTCGAGAATTGCTGGA10.7092198581560284No Hit
GAGAACGGCCGCAAGGTCGCGTTCGTCGGCCGGTCGATGGTGCGCAACAT10.7092198581560284No Hit
CGCGCAGCCGCATGCCGAGCGTGAGATCCGCGAGGGCTTGCTGCGCGAGG10.7092198581560284No Hit
CACGCAGCGCTCCTTCCTCGCCTACGACGCCCGCACGCCGACGCCATAGC10.7092198581560284No Hit
GTTCCAGTGGGGCTGGCTCGGCGAGCTGTTCGGCGTGCACCAGCCGGGCC10.7092198581560284No Hit
CTCCTACGGGGTGGGCACCGTCGTCGGCCTGGAGGGCACGGGACGCTCCC10.7092198581560284No Hit
CTCAAGCGTTGAGCGGAATGCAGCAATCAATGTCGTCGGAAGATCCTGAA10.7092198581560284No Hit
TACTACCGCTGGGCGGAGTCCTTCGCCGTGCAGACCGCCGACGCGCTCAT10.7092198581560284No Hit
GAAGTGACCCACTCGCAGATCGAAGAAGCGGTCATCGAAGAAATCATCAA10.7092198581560284No Hit
GGGTGAGCTCGTCGGCGAGGTGGCGCTTGTAGTCGACCGGGCCGCGGCCG10.7092198581560284No Hit
GTGCTTGCCGACGAGTCCGTCGGGGTCGTAGACCAGGAAGAACACCGCTC10.7092198581560284No Hit
GTGAGCTACGAGCGCCGATGCGTCACTCCACCGCATCTTCGCTGGTAGAA10.7092198581560284No Hit
CTTCAAGGCCGGCGTCGATTTCTCGTCCAGGACGCTGCTGGAGCTGTCTC10.7092198581560284No Hit
CCTCGGAACGTCCGGCTCTGCGCCCCGACGCGGCTCCTGGATCCGCTCCT10.7092198581560284No Hit
GAACCGCTGCGTGCGGCCGACGCGCTCGCGGTCGTACTGCCGCAGCGCCT10.7092198581560284No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG10.7092198581560284No Hit
CTCGCGGCGCTGCCCGAGAGCGAGGAGGCCCGCCTGGGCACCGAGCTCGC10.7092198581560284No Hit
ACTCTAGCCCGCGGGCTATCTCCTTCCTGGGCGCGGCTCCCGGTCTGCGG10.7092198581560284No Hit
CTCAACTCCATCGTCGTCTTGGCATCCCCGACTGCCACGGGCACGATCTG10.7092198581560284No Hit
CATGACGATGCTGCGCATCGACGAGGCGACCCGCTACCTCGTGCTCGAGA10.7092198581560284No Hit
TACTTATACTAACATTAGTTCTTCTATAGGGTGATAGATTGGTCCAATTG10.7092198581560284No Hit
ACGCCCACCACGTCGGCACCGGCGTCCCCGATGAGCGGCAGCAGCTCACC10.7092198581560284No Hit
GCGTAGAGGCGCATGGGCTCGTCGCCGATGTTGATGATGTCGTGCCACGT10.7092198581560284No Hit
AGTGCGGTGCGGTCGGCCCGCCGGGCATCGGGACCCAGGGGATCGCTGGC10.7092198581560284No Hit
CTCGAGGCCGATCTCGACGCGCGTCGCGCGCTCGTCGGCAGCGATCGAGT10.7092198581560284No Hit
TCGCCTGTGAGCGGCTCGACGCCCGGGCGCTCGCCGATGGCAAGCACGCC10.7092198581560284No Hit
CGACACGGGCAGCGGAGCGGCGGCGGGTGCGTGGGACATCGACCGCCGTC10.7092198581560284No Hit
GGCCCGAACTGGTTGGTCCGACGAATGCGGAACATTCGCGCCCGGTTAAG10.7092198581560284No Hit
CTTCCTCTCACCTGACGACGGCGATTACCAATCTGATCCCGGTCTTGGCT10.7092198581560284No Hit
GCCCCAGCTCCAACACTCGGAGGAAGTTACGCGGCGGGCGTCATCAAGGA10.7092198581560284No Hit
GAAGAAGACCTCCTGTTTGCCACGCTGGACCCGATGACCAGAAAAATGGT10.7092198581560284No Hit
GGGCCGTGACCGAGCCGGGCTCGAGCGCGATGGATGCGTCGTGGACGATG10.7092198581560284No Hit
CGGTCCGGGAGACTATCCAGCAGCTTCATGTAGCTGGCCGGAATGTTCGC10.7092198581560284No Hit
GTGGTGGAGACCCAAGAAGGGAAGACAACTATAATTGAAGGCCGTATCAC10.7092198581560284No Hit
CCGTCGAAGGGATGCCCCATGCCAGGAATCGTCATCATCGGCGCCCAGTG10.7092198581560284No Hit
GCCGGGGCCTGCAGGCACTGTTCGGCGCCGGCGACGTGCTGCTGTCGACG10.7092198581560284No Hit
AAGGGAACCTTCTTTATCTGCGCCCTATTATCATTCTTCTCTCACCATTC10.7092198581560284No Hit
CTATGGTCAGTAATTCCTGGAGGAATAGGTACCAAGAAAAAAACGAACCT10.7092198581560284No Hit
ACCTAACACCGAGTCAGATCGGCTACGGCACAAACTATATCGGCGGCACC10.7092198581560284No Hit
CATCGAAGCGGCCTGCGGCGCCGCTCAAGCCCAGTTCCGGCTCGCCATGG10.7092198581560284No Hit
CCACCGGCATGGCCGATCCTCCGGAGACGCACAGCCGGAGGCTGGAGACG10.7092198581560284No Hit
GCGTCGGCGAGGTCGGTGACGAACACCTCGCGCGCGTCGCGGGCGATGCG10.7092198581560284No Hit
ACACGATGATGATGGGCGCCTCGCTCTTCTGGTTCGCCCGAGGCCTGGCC10.7092198581560284No Hit
GCACCACCACCGCGCCCGCGCGCACAGCCACGTCCCGCGTCGCGGCCGCC10.7092198581560284No Hit
GAGAAAACAGATCCAACCATTTTCCGTGAAATGGGTGAACTCGGTCTGCT10.7092198581560284No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers