FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003627991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003627991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences98
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGCTGAGCCTGGGCGGGTGCGTCCTTGTGATCGGATTCATCGCCGGTG33.061224489795918No Hit
GCCGTTGTCGCGGCGCTTGAGCAGATCGTCGAGGCGACGGCGATGCATGT33.061224489795918No Hit
CTTTCTGGCTGCGCGTTCCATTGCTCGCGCAGGCGTTTGCGAACTTCCGA33.061224489795918No Hit
GTGTGTATGTGTGTGTGTGCAATGAGCCGAGATAGTACCACTGCACTCTA22.0408163265306123No Hit
AGGTTCCAGATCTCCATGTACCGGGAATCGTCGACGACGGGGCCGCCTTC22.0408163265306123No Hit
GTCGGGCCGCGCGGCGCCTCCCGCGTGAAATCCCACAGGCCGGTGGCGTC22.0408163265306123No Hit
TTCGTACGTCAATCGTCTGTCCCAATCCGAAAACGTGCGTGAAGCGACCG22.0408163265306123No Hit
ATCCGAAGCCAACGACGCCCAGGTCAAGCTGGCGTGGCGCTACCACCTCG22.0408163265306123No Hit
GATGGAAACCGAGGTGGCGCGCAAGATCGAGAACTCGGTCGCCAGCGCCC22.0408163265306123No Hit
CGTTCATGGCCCTCATGGGTTCTCTGGGCGTCATCGGAAACTGGGCCGAC22.0408163265306123No Hit
GCCCAAGGGTGGACGAGCATCGTCGTGGCGGTCGTGCTCTCTATACTCTT22.0408163265306123No Hit
GCTCACGTTTGATTCGTATGCCGAGCTGCGCGACCTGTTCCATCAGCTCA22.0408163265306123No Hit
CATTCTAGGAAGTTCTTCATCAGCTTAGGAAGGTGCAGCCTCTGCAGTCA22.0408163265306123No Hit
GTCATCACCAAGGACAACGCGGTGGTGCGCGTGGACGGCGTGGTGTTCTT22.0408163265306123No Hit
TCCATGAAGAGTTCCGAGGTCGCCTCGTTCCAGCACAGCAGCTCCGTGCG11.0204081632653061No Hit
GTGATGGTGACGGCGCAATTCATGTTCATCGTCGATGCGTTCATTGCCAA11.0204081632653061No Hit
GGGGTATTCATCGCGGTACGCTCCGCGAAGCTGCGGATGTTAAAGTTACG11.0204081632653061No Hit
GCTAGAGGGAGGGATTTGATGGGTAGAGAAGCATAAATGTCCAACCTTCA11.0204081632653061No Hit
ATGTTAGATAACAATTACTGCTCTTAGAGGTTGCAGTGAGCCAAGATCAT11.0204081632653061No Hit
GTAACAAACTGGAGCGGAAACACCGCGAATCGGTTTCCCCGACCGGATTC11.0204081632653061No Hit
GCTCCGTTGTGGTGTTCGGCCTCTATATAGGTGCCCCGAAGACCACATCG11.0204081632653061No Hit
GGCGCAGACCACCAAGTGCAGCTAATTTTTTTGTATTTTTAATAGAGATG11.0204081632653061No Hit
CAATAAAAGTAATTTTAGATTCGCAGGATGCGGTTGAAGTGAAGCCAGGG11.0204081632653061No Hit
GCTGTGATGTATGCGCAGCACTCGTTTGCCGTGTATGCGCTGGCCGCGCA11.0204081632653061No Hit
GCGCACCGCCATGCCTGCGGCGTGGCGTTCGCGATCATCCATGGGCGCCC11.0204081632653061No Hit
CTCAAGAACCTGCCCGACGTTCATTCGGGAGGGCACACCCAACGGGTTGA11.0204081632653061No Hit
GTACGAGCGGTGCCGCAAACACGGGTCTGGTGCTTGCTTCAAGCGACGCA11.0204081632653061No Hit
GTCGCATCCGGCACCTCGGGTATGCCAGAAACGTGAACACTTCGTCCCCG11.0204081632653061No Hit
CATCAGGTCGTCGGAGATGCTCATCAGCTTGCCGAACATCTCGTTGGGCG11.0204081632653061No Hit
CCTGTGGGAGCTGCTCCTGATCCGGAGCGAGGCGGAACGCCGTCATCAAC11.0204081632653061No Hit
CTGCTGGCACGATGACGGCCAGCACAAGCTGGGGAAGGTATTTCGAGTAG11.0204081632653061No Hit
TCGCAGCGTCGATAGCCTTAAATACGGAGTTGGATTTTGGCGCCGTCGCA11.0204081632653061No Hit
CGCTGCCGAGCTGGCGCACGGCAGCCGGCGTGTTGTCAGCAACGGCGCGT11.0204081632653061No Hit
GGATGAGCAGCGGCAGGTGCGCAGCATCATGCTGTTCCTGCACAGCCAGA11.0204081632653061No Hit
GCCTTCACCAGGATGCCCTTGTCCGAGCCGGGCGCCGGCGAGACGTAGGT11.0204081632653061No Hit
GTCCTGCCCCGACCACGGCAGCAGATAGCCCATTTTGGCCGGCGATTCCA11.0204081632653061No Hit
GGTTGCGGGCGAAGTGCACGCGGCAGCGTTGGTGGGCGGCTCCTTGGAAG11.0204081632653061No Hit
TCTTAATGCAGATCTAGAAATGGTTTTTCACTGAAGAGAAAACTACAGAA11.0204081632653061No Hit
GCTCTTCCTCCTGAACGTCTTGTCTGCCCGCGCGTATGGTGAGAGCGAGT11.0204081632653061No Hit
TTCCCAGAGAGCGGCACTCGAAATGGTAGCGGGTGTCTGGTTTTAGTCCC11.0204081632653061No Hit
GCATAGTTAGAAAAACCATGCGTAGCGGTTGACAGGTCAAGGACTCCCCC11.0204081632653061No Hit
CTCCAGTTGGGCCGGGCTGGTCGGCCGGCCGTCACGCCGCACGCGCACGC11.0204081632653061No Hit
GATCAGCACCACTTCGCCGGCCGTCACCTTGCCGTTGAGGATGCCGTCCA11.0204081632653061No Hit
GGGTAATTTGGGTCTTGTCCAGCATGACGGTGTAAACAGCATTTCCTGAT11.0204081632653061No Hit
GGAACTGACCGATGCGGCACGCGAATGGCTCGGCCGCGTCGGCTACGACC11.0204081632653061No Hit
GCTCTGACATCTTCCGTAGAGGTGAAAAAGCACAGGTCTGACTCAGGTAG11.0204081632653061No Hit
TCCGTGGGGCGTCGGGAATAACCCGAAGACCGCTGTGCACGCCTACCTGC11.0204081632653061No Hit
TGTCGGAGCCGGGCTGGTGGGTCAATGACGGCCCGCTGGGTGACCACGAG11.0204081632653061No Hit
TGACTGAGTATCAACCCGGTACGCCGGAGTGGAAAGGCCCGCGCACGGAA11.0204081632653061No Hit
TTGCCACGGAATGGAGCCATGTGTTCAAGGCCCATAACCTCAACGCCACG11.0204081632653061No Hit
GCCCACGGCGTCCTTGACCAGCGCGTTGAGCTTGACCATCTCGGCTTCCG11.0204081632653061No Hit
GCAGGACATCACGCCCTTCTACCGCCAGGACGACAATTACCTGATCGAGC11.0204081632653061No Hit
CCGATAGACGGCTTCACCGCTGATTCCCCGGCCGTTGGTGGCCGCCTCGT11.0204081632653061No Hit
GAACTGGGGTTATAAAAGAGGATATTAGCTATGCCTGCTATAGAATGAGG11.0204081632653061No Hit
GAGCTCCGGTGTCCTTCGGATTCGACGTCACTCCTGAGAAGTACATCCGC11.0204081632653061No Hit
CTGAAATTCAGCGTCGAAATACGATGGCAATGCCTTTTAATGAGGCTGGT11.0204081632653061No Hit
GCCAACTTCGGCGTCTCGGTGTCCAACGGCGCCGACGACGTCGTCGTCAC11.0204081632653061No Hit
GACCTGGAGTAATCATTTTGCTTGGTCTGGAATCTCCATTCACCTAAGTC11.0204081632653061No Hit
CGGCGCGCGGCAGGTCGATGACCTGTTCGGGCTGGCCGCTGACGGGTGGC11.0204081632653061No Hit
ACTCCATCTCAAAGAAAATCAAACTGTGAATGGCTATGTTGAAGATAGAA11.0204081632653061No Hit
ATATAAATGCCTTCACTTGCCAAATGCTTCACAGTAAGGATGCATGGCTG11.0204081632653061No Hit
TTCCATTCCATTCCATTTCATTCCTTTCCATTCCATTCCCTTCTATTCTT11.0204081632653061No Hit
CCAAAGGTCGATGCAAGCATGCGCTGAAGATAACCATCACTTTGTGCCTG11.0204081632653061No Hit
ATTCCATTCCATGCAATGATTCCATTCGATTCCGTTTGATGATGATTTCA11.0204081632653061No Hit
CAAAGAAAGCCCCCAAAAAAGTGGTTTAAGGGATGCAAAAGTCTGTTTCA11.0204081632653061No Hit
GTGAACTACCCGGAGGAGGCCGTATACCTGCCGCCCCGTTACCGGGGCCG11.0204081632653061No Hit
GTTCTGGCGTTACTTCACCCACGCGTTAATGCACTTCTCGCTGATGCATA11.0204081632653061No Hit
CGCTCGAAGTCGCCCCGGCCGTGCAGGGCGACGACGGTGCGGTCGATGTC11.0204081632653061No Hit
GGCGATCACCTTGACGTTATTGCGCTGGTAGTCGAGGGACATAAACAGCT11.0204081632653061No Hit
CCAATTGAATGCGGACGGCGATCTCGTGAATGGTCGTCTGGCCGAGGACG11.0204081632653061No Hit
TCTCTGAGGATTTCGTTGGAAACGGTATAAACTTCCCAGAATTACACGGA11.0204081632653061No Hit
TTACTCCCCGTCCTCCGGACCTTCGAGGACAGAGCCCATGCCACGGACGG11.0204081632653061No Hit
GTGTAGACCAACACACGCTGGCCTCACGGCTTCTGCGGGGGAGGAACCGT11.0204081632653061No Hit
GTAACAAACTGGAGCGGAAACACCGCGAATCGGTGTCCCCGACCGGATTC11.0204081632653061No Hit
GTGTGGTGTCGAACCGTCCGGTACGCGAGCCGTACCTGAACTTCATCGTC11.0204081632653061No Hit
ATTTTTTTCTCTCTCTTTTTATTTGACATCTTGCCCCAAAGATAGACTTA11.0204081632653061No Hit
GCGACAGGTTCGGGCGGATGCAACCCCCGTCATCGTCATCGACCCGCGTG11.0204081632653061No Hit
TTGTTGTTCCCCAAACATGTTAAATACACTTGTGTCTTAGGGCCTTTCTA11.0204081632653061No Hit
GCATGCAGATCATGAAGGAATAACATAAACATGTCTGAGACACTTTGGCA11.0204081632653061No Hit
GCGCGATGCTGGTAAGAATCGTTTTCATCATGGTTGCCTCCGGTTCAGTG11.0204081632653061No Hit
GTGTTGGAGCGGCGGAAGTTTTTGGGGGGTGGTATGGAGAGAGAATGGGC11.0204081632653061No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)