Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003628047 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 845646 |
Total Bases | 84.5 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 50 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 2101 | 0.2484491146413511 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 1576 | 0.18636639917885262 | Clontech Universal Primer Mix Long (96% over 26bp) |
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA | 1258 | 0.1487620115272821 | No Hit |
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG | 1120 | 0.1324431263199968 | No Hit |
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT | 901 | 0.10654576501278312 | No Hit |
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA | 879 | 0.10394420360292606 | No Hit |
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA | 871 | 0.10299818127206893 | No Hit |