FastQCFastQC Report
Fri 10 May 2024
EGAF00003628312

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003628312
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64
Total Bases6.4 kbp
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCGAGATGGAGAAGCTCATCAAGCTCAAGCAGGGCGATGTCTTCTCGT34.6875No Hit
GTGCTAATTAGTATAACATATTTTAATGAATAGTCTACACTATTTATCGA34.6875No Hit
GTTGCAATGCATGGCACTTTTCACCAGAAGATGATCACAGTGCTTAGGGG23.125No Hit
TGAAAGAGCACACCGCGCGTGTTTTGCGTCGTCGTGAGCGGGCCGCTCAG23.125No Hit
TGATGACGCTGTGGCTGCCCACCATCAACTACGCCAAGACGTACCGCGAT23.125No Hit
CCTGTCCAGCCACCCCGTTGTGTGCTCAGTGCAAGATCTCCATAAAAACT23.125No Hit
ACAGAAGAGTTACTGCTTCCAAATCAGATGGAGCCACTGGGGTGTTATTG23.125No Hit
GCCTATGTATTCAGCAAGGGATGACCCATTCGGGCCGGGTTTCCCCATTC23.125No Hit
GCCGCCGGCGAATCGTCAGGTGTTCAATACTTTCAACAACCCGGTCGAGA23.125No Hit
ACAGAATGCTGTGAAGAGGGGGTTTTATGCAGCAGGGTATCTGTCCTATG23.125No Hit
GTCGAAAATACGCAATGAGGTCCGGGAGGCCCAAAAAATTTTTCAGCGGA11.5625No Hit
ACTCACCAATGCGCCGATCGTGACGGGCGGCAGTACGCTCACTCAACAGC11.5625No Hit
CCCCGCATCCAGCTTGGCGCGGATGTGGCGAGCCGCCTTGTCAGCTGACC11.5625No Hit
CTCCCGGAAATGGCAGTGTGACAACCCAGACAACAACGGCCATCAACATG11.5625No Hit
GAAAATGACACCCAGCCCTTCCAGCTCAAAAAAAAAAAGAAAAAAAAAGA11.5625No Hit
GCCGCGCTCTTCCAGCCGGCGCAGACGCTCCGACACGCTGGGGGACGACA11.5625No Hit
TCCATCGACGTGACGTCGGCGGACAGGCCGATGCGGAGGTCGTCGGCTTG11.5625No Hit
CGCACATGCTGGTGATTCCGTTCATCTCGCCGGTGCTGGTGGCCAACCAC11.5625No Hit
GTGGGGGAACAAGGAAAGGCGCAGCTGTGAAGCCGACAGTTTTGCTGAAC11.5625No Hit
GTAGCTAGACTGCCTCTCTAGATTCCTCCTCTCTGGGCAAGGCATTTTTG11.5625No Hit
GTAACAGGTAGCTCCACGTCTCAGAGAGTCCGGTGCCGCCGCTGCGCAGG11.5625No Hit
GCTGCGCCAGCGTATGCAGCAGCGCGGCCGTACGTGGATCATCGTTGCCG11.5625No Hit
AAATGAGCGGGCGGCCATACAGAATACCGAAGGGATGCAATTTTCGGTCG11.5625No Hit
TGTTCGACCTGTTCCCGCTGATCCTGTTCTTTGTCGCCTACCGGTATGCG11.5625No Hit
CCGGAATATTTAACGTTTGACGAAGAGAAAAAGGAAGGAACCTTTACTCG11.5625No Hit
ACCGCACCATGCAGACCAACGACGTGGTGGCGCGCGTCAAGGCCGAGCTG11.5625No Hit
GTTTTAAGTGATTGACTTTAGTCACACGCCCTTTTGGTGTTAAATCAATT11.5625No Hit
ATACTAAACAGTTAATAAATCCTTACAACCATCTGAGTATTTTTCCTTTC11.5625No Hit
CGCAACTGGTTGTCGAGTTTGGCCGAGTCCACAAAGCGTTTGACGTCGTC11.5625No Hit
CCCGCACCCTGTTCATGGTCGAGCTGGCGCCGGGGGCGAAGCTCGCCGAC11.5625No Hit
GCCGCGAGCTGGCCGAGCGCGAACAGGGTTGCGACAATGCCGGCGGCGTC11.5625No Hit
AATTAACAGCGGGGGATTTAAAATGCTTTAAGTTTTGTAATAGCGGTTCA11.5625No Hit
GGTGAGTTCCTGGTAAAGTGCACGCATCGTTGCTTTTGGCACGACGCCGA11.5625No Hit
ACGCAGCACCAGGGCCGCCTGTGGGCAACCCGCCGGCACCTGTGGGTGGA11.5625No Hit
GCACACGGCAATCGCCCCGAACGCGCCGATGCGCGAATCGTGCATGATGC11.5625No Hit
CCACCAACAAGTACAGTCATTTCCGGTGCCGTCAGGTCTAAGAGTTGAGC11.5625No Hit
TTTCTAGAGGCCGCCAATAGCCCCTTGTTTCCGTAAATGAAATGACATGA11.5625No Hit
GCGGAAACACGCATTGAGTGGCACACGCTCTCCGCCGTCGGCAAGACACT11.5625No Hit
CCTTTCAGGTCCCCAACGATGTCCGCGGCCGCAACGGCTTCTTCAGACGG11.5625No Hit
GGCAATACCTGAAATAGATGCATATAAGTCATTGAATTAACTAGTAGTGC11.5625No Hit
AAGCTGGTGGACGACACGATTGCCGGCGTGATGAAAAGCGGCGAGGTCAA11.5625No Hit
AGCTTGGTGCGGTTGACCAGCAGGATCAGCCCGACCATCACCAGGATCGA11.5625No Hit
CGTTATGCCTATGTGCGCGGCAGCGGCTTCGGCGAGAACGGCGCAAACGG11.5625No Hit
GGCCAGAAGAACGGGTTTTCGCATGGGGCAGGACTCCAATCAGAAGAACA11.5625No Hit
GTAAAGGATTTTATTTCTCCTTCACTTATGAAGCTTAGTTTTGCTGGATA11.5625No Hit
TAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTCG11.5625No Hit
GATCAAACAGCCCGGTCGGGTTCGCATGGCCTTCCGCCACGCGTTCGCGC11.5625No Hit
CGCAACTGGTTGTCGAGTTTGGCCGAGTCAACAAAGCGTTTGACGTCGTC11.5625No Hit
GTGGTGGCGCTCATCTTTGACCAGGAAGAGGCCAGCGATGCGCTGTTCGA11.5625No Hit
GATCGACGCAGGCGCCATCGGCCTGAAGCTGCACGAAGACTGGGGCTCCA11.5625No Hit
ATCCTGGTGGCCGTCGGGCTGCTGTTCAAGATAGGCGCGGTTCCGTTCGC11.5625No Hit
CTCTCATACTGCTGCCGCTGCTTGAACGGGAACTAAGACGAAACCGCCGG11.5625No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)