FastQCFastQC Report
Sat 23 Apr 2022
EGAF00003628350

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003628350
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTACTCCTTGTCCTACTCGCTTCTAGTCCTATGCCTGTGTCTTGATCT21.8518518518518516No Hit
GCCCTGGGGCCGGCCCTGGGCCTGCTGCAGGCGCGGCGCTGCCGGACCAG21.8518518518518516No Hit
GGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGA21.8518518518518516No Hit
GGGCTGGGCACTGGGGACATAGCAGTGACCGAGACAGACAGGCTCACAAG21.8518518518518516No Hit
GGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATG21.8518518518518516No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC21.8518518518518516No Hit
TTCCTAGAGATCCAGGCATCTAGTAAAGAAACATGGACAGAGAAATGTCA21.8518518518518516No Hit
GTCTGATAATGAGGTGATGGGGAAAAGTGAAGAAAGTGACACAGATACAT21.8518518518518516No Hit
GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATG21.8518518518518516No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA21.8518518518518516No Hit
TCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCA21.8518518518518516No Hit
CTGCGTTTTCCAATTCTTTGGTAAGGTTCAGGTAATCAGTCAGCTCTTGA21.8518518518518516No Hit
GCTATGCCGAGGATCCAGTGCACAGAGGGTCAGAACATGAGTTAGGAGGG21.8518518518518516No Hit
GTGTGTTCAGAAAGCAATAAAGGAGAAAGAGATTCCTATTGAAGGACTGG10.9259259259259258No Hit
AAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC10.9259259259259258No Hit
GGAAGGGGTGGTCGGCGCAGAAGCGGGGGACGAATCTGGCACACCGCATC10.9259259259259258No Hit
AATCTTATGTGAAAACACCTACTGTGGGGGAACCAGAAACCTAGCTATCT10.9259259259259258No Hit
GCCCACACCCAGATGCGCCTGCTTCCTCTGCGCCAGAAGAAGGCCCACCT10.9259259259259258No Hit
GATTGATTCTGTCTGCCATGGTAGTGATTTCTTTGAATGCATTCATCATT10.9259259259259258No Hit
AACTGCTCCTGCGCCGCCGGTGACTCCTGCACCTGCGCCGGCTCCTGCAA10.9259259259259258No Hit
ATGATGATTTTGATGATGAGGAAGCTGAAGAAAAAGCGCCAGTGAAGAAA10.9259259259259258No Hit
TCTTCACTGATTCTTGGATACCACAGAGAATGAATTTTTTTATGAATTCT10.9259259259259258No Hit
CGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA10.9259259259259258No Hit
GAGAAGAAACTTCGAGTTGAAAATGCTAAACTGAAGAAAGAAATTGAAGA10.9259259259259258No Hit
CTTGAATGTCATCCACCCTATGAATCTGGCAGTCCAGGAAACTTTCAGGA10.9259259259259258No Hit
AGATACCGTCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCG10.9259259259259258No Hit
ATATAAAAAGGGAAAAAAAGGGAATCTCAAACTCAGCATTCTAACACACA10.9259259259259258No Hit
TATCTAGAGTCACCAAAGCCGCCGGCACCCGCCCCCCGGCCGGGGCCGGA10.9259259259259258No Hit
ATAGATACGCCGGTAACTATTTTAAAAAAATTGATGCAAACAAGTTTACT10.9259259259259258No Hit
ATATTCACCTCTTCAATACCAGAGATATTGTTTACCCCTAACTTCTTTAA10.9259259259259258No Hit
GCCCAGACCCTCAGGGAGCCCTTTTGGTGGATAGCGGACACCTGAGGCAG10.9259259259259258No Hit
GTAAATGTTAGTTCCTGACTTGTGTGTGTGCTTATTGGAAGGACTAGTTC10.9259259259259258No Hit
GTGTCAGGTTATCCACCTCGGGCAGCTCGTCAGGCTGCGGCGCCCTGTTC10.9259259259259258No Hit
ATCCCCGGGGACGGGACGGGCCGGGGCTTGGAGGGGGGTCGGCTGCCACA10.9259259259259258No Hit
CGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCC10.9259259259259258No Hit
GTATTTGTGTCACTTTGGCCAGTCTCTAATCCATGTCATCCAGGTGGTCA10.9259259259259258No Hit
ATCAACGCAGAGTACATGGGCTACCTGGACCACGTGTGGGATGAAGGCTG10.9259259259259258No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCA10.9259259259259258No Hit
GTGATGGGTAGATAGTGTGGTTGGAGACACGGATTTCTTCCTGAACAAAG10.9259259259259258No Hit
AAGAAGTTCAGCTTCTAGTTTTCGCTGATGAACCATTAAGGACTGGACCT10.9259259259259258No Hit
GATGCGGCATGTGATCAGCTACAGCTTGTCACCGTTCGAGCAGCGCGCCT10.9259259259259258No Hit
GTCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT10.9259259259259258No Hit
CCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGGGGGGAGTA10.9259259259259258No Hit
TGCTACCACATGGCTTTTTCCCAGGGAAAGTATTAGTTTTTGTTTGACAA10.9259259259259258No Hit
TCTCGTATCCGGGCAAGATCATGCCTCAGATCGCGCAGATGCCCGACGGT10.9259259259259258No Hit
ATTGTACTGCCCGTCTCTGCAGAGGATAAGACACGGCTGGAAGGGTGCAG10.9259259259259258No Hit
AATCCTAGTTCACAAGGGAAACTAGTCAATCGTCTTTGCGAAGTCCGAGT10.9259259259259258No Hit
TTCTTGGGTTGTGGAGTGAGTGTTCAAGTCTTCGGAGTTTGGGTTTGCTT10.9259259259259258No Hit
CATTGTAGCAATGATCTCAACACGTGGACAAAATTGGCTTGCAGGAATAA10.9259259259259258No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTAATAATT10.9259259259259258No Hit
TGATAAGGTTACCTCTGATTATCATTCAGGATCCTCTTCTTCAGATGAAG10.9259259259259258No Hit
GGCTGCAGCGTCGTCCTCAAATTTCGCACTGACCATAATGTGATCCCTTC10.9259259259259258No Hit
GTTAATGTAGTTCTGATCAAGGATCAGGGGGCTTGGAGTCCTTTTTCCTC10.9259259259259258No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG10.9259259259259258No Hit
TGGCAGGACCATTTTTCTGGTCATCGGGTCCAGCGTGGCAAACAGGAGGT10.9259259259259258No Hit
GCACTGGGGGACCGACTCAAGGCTGCTGGTCAGCGCCTCCCAGGATGGGA10.9259259259259258No Hit
ATTCAGGAAATTTGACTTTCCATTCTCTGCTGGATGACGTGAGTAAACCT10.9259259259259258No Hit
TACTTTTGGTACATTGTGGCTTCAAAAGGGCCAGTGTAAAACTGCTTCCA10.9259259259259258No Hit
ACCTGCACCTGTGTCTGGCCCACCACCCACCTCTGGTCTGTGCCACTTTG10.9259259259259258No Hit
TTTTTTTTTTTTTTGACAGTGGTATCAACGCAGAGTACTTTTTTTTTTTT10.9259259259259258No Hit
GTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGGCGTTATTCCCAT10.9259259259259258No Hit
CGGAAGCAGGATGAATAAAGAAAGGGAGAGCACATGAAGCTTTGCTAATT10.9259259259259258No Hit
GGGCAGTTCCAGGGACCAGGAAGGGATTCCCGTCCAGTGTCAGGTTATCC10.9259259259259258No Hit
TGGCAAAATAACTGGCTCCCAGGGTGGCGGTGGTGGCAGCAGTGATCCTC10.9259259259259258No Hit
CCCCAGGAGGCATCTTGTTTAGACACTGTGCGATAATTCTCAGGGACTGG10.9259259259259258No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTCGTTTGGTTAAGGGGGTAGGTAG10.9259259259259258No Hit
TCCCTGGTTTGTATTACGTCATTTGCCAACAAGCCCAAGACAAGGCAGTA10.9259259259259258No Hit
GACACACACTGGAAGGCTTCGGACCAGTCGGGCTGAGGTTCGGAGAAGTT10.9259259259259258No Hit
GTCGTCACCTTCCGCCCGATGAGCAAGTGGGTCGTCGAGGTGCACCGTGC10.9259259259259258No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCGAGAGGTGAAA10.9259259259259258No Hit
ATCTTTAAAACATCTGTTGGTATATTTAATTTTCCACTGGATTCCATCCA10.9259259259259258No Hit
GGAATAAAAATGCTAAATAAGAACTGGGCCAAAAGATCATAGATAATGTG10.9259259259259258No Hit
GAGTAACCACCATGGGCTTTGGCGACATTGTTGATTAACTCCATGATCAG10.9259259259259258No Hit
CTCCTGGCCGGCTTCGTCTCGCAGAGCCGGGGACAAGAGAAGTCGAAGAT10.9259259259259258No Hit
ACTCCAAAGTGGAGCCAATCCCCTGGAACCAGGCTGAAGGGGACCTCACC10.9259259259259258No Hit
TAACTATCTTAACAAGCTTTGAGTGCAAGAGATTGAAGAGTTCAAATCTG10.9259259259259258No Hit
GTATTAATATTTCACCCTTTTCTGACAAGTGCACATGAATAAACAGCCTG10.9259259259259258No Hit
TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCC10.9259259259259258No Hit
TCTTCAGATGACTCAGCAGCTTCATCGCAGCCTCTAGAACATGGTTGTTA10.9259259259259258No Hit
GTTACAAAGATATAGTTTATGATGCTGAGGTTTGGGGTATGTCTGAATCT10.9259259259259258No Hit
TTGTTGATCCTTTCAAAAAACCAGCTCCTGGATTCATTGAGTTTTTGAAG10.9259259259259258No Hit
CCTAGGAGCAGACCCAAGCTTGTGGCACCAGGCATCTGATGGTGCCAGGA10.9259259259259258No Hit
CCTCATTACGATTCGCCTGCTTACTTCTCCTGTTCAATCGTTTCTTTGGA10.9259259259259258No Hit
CATTAAGAGAGAAGTCTCAACAGCTTGAGAGTCTTCAGGAAATAAAGATC10.9259259259259258No Hit
ACACACTCCATGCGTTTTGCTACATCTCCGGAAGAGGTAAGGACTTGAGT10.9259259259259258No Hit
CTTCAATGTCAAGGAACTGTTTTCCGTGAGAAGCCTCTTCGATGCCCGAG10.9259259259259258No Hit
TAGTCACACAATTTCCTTTGTGGATTTTAACGGTAACTAATAAGGCTTTG10.9259259259259258No Hit
AGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCAAGA10.9259259259259258No Hit
GTCCACATCCTCATTCTGCTTCTGGGCCACTCCTGTGCCTAAGCCATAGA10.9259259259259258No Hit
CTGGAAAGGTTTGATTCCAGTATGTTTTCGGAAATGTCTTGTTAGTTCAT10.9259259259259258No Hit
CCCCATTTCATTGCCAAAAGAGTCACCTATGACTCAGATGCAACCAGTAG10.9259259259259258No Hit
GTTTACAGAGCATAGGCAGAATAGATCTAGCATAATTTTTAAGGCCCTAG10.9259259259259258No Hit
GTTTAAGTCACCTTCATTTTAATCTAAAAGCATTGCCCTTCTATTGGTAT10.9259259259259258No Hit
GGACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTC10.9259259259259258No Hit
GTGTAAGTGTATAAGCATATCAATATTAAAAAGCAAGCAAGCAGAATTTG10.9259259259259258No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers