FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003628354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003628354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCTAGCATCTCTGACGAAAACAGCAGACGGAAAAGTACTGACCAGCGT317.647058823529413No Hit
TCTCCAGGTTGTGCTGCTGCAGCTGGGCTCGAAGCAGGGCGTTCTCATTC211.76470588235294No Hit
ATTTTATATTACTTTCTGAATCAGCCTACCCCTACTCCTCTCTCCAGCCC15.88235294117647No Hit
CAGCTGTGTTCGCGGACTCAGGTGGAAGGAATTTCTTCTCTTCGTTGACG15.88235294117647No Hit
AACAGGAGGTCTTCTTCATAGCTGTCAGCACTCGTCAGGCGGTTGAACCA15.88235294117647No Hit
CTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGG15.88235294117647No Hit
GACTGACTCACACTGCCTCCAGAGCTAGCGCTCACTGTATCTTGACCCTC15.88235294117647No Hit
GCCGAAGCATAGATTGTAACCCCTCCACTCCCCTCTGAGATTGGCCTTCG15.88235294117647No Hit
GTACATGGGGTTGCAACCTGGTACCCACCCAGGGCTGGAGAGTCTGCGTG15.88235294117647No Hit
ATTCTCCTGCCTCAGCCTCTTGGGATTACAGGCATATGCCACTGCACCCA15.88235294117647No Hit
AGTCCGTGGTGTTCAGGAAGTGCTCGTTCAGCTTCACATTGCTGAGGCCG15.88235294117647No Hit
TCCGAGTTCAGTGCGACCGTACAGCTCTGGAACCCAAAGGTTCGTTTTTT15.88235294117647No Hit
GGCGGCTCCATCCAGGCATTTCCCAGCCTCCCCACTCTCTGTACTGGGCT15.88235294117647No Hit
CACCTGTAGGCCTCTGAGCCAGCGTCCAGGGTACAGGTGCGGGTGGTGGG15.88235294117647No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)