FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003628567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003628567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAACATGAAGAACTGTAAACATCCTAAGCTTACAACAAACCTATCTA212.5No Hit
AGGTAGAAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATCTCCTC212.5No Hit
CTTTTCAAGTTTGACTTTTTAGGATGCAATTAATTCACTAAATACAGAAC16.25No Hit
AGTTTATTCTGAAGAGGGATTGTCTTATGTTTACGCACAGGGAAGAAATA16.25No Hit
CTTTTCTGTCGGAAAGCTTTTTCCCAGCAGGCTCATTTTTGGCCTTCTCT16.25No Hit
GGGCCACATATTCCCTCCTGGCTTCAGGACAGAAATCTGTAACTGCTCTT16.25No Hit
CGGTTCCCTCAATATGATGATTTTTTTCCTTGGTCCCTATCTTTCACCAT16.25No Hit
GCCGTCTGCCCCCAGCCGGCCACACTGCATGTCTGCCCTGGCTTCACCTG16.25No Hit
CTTCAGAAGAGCTACAGAAAGATCTAGAAGAGGTAAAGGTGTTGCTGAAA16.25No Hit
GTACATGGGGCACTCCAGCTACCGAAGCACTGGAGAGTGTCATGGAGGCC16.25No Hit
CTCTTGTACTACACTGAATTCACCCCCACTGAAAAAGATGAGTATGCCTG16.25No Hit
ACTCTTGCTGGCTGATGGTCATCTTCAGCAGGGCATCGTCTGAGTCTCTT16.25No Hit
ATCCAGACTGGTTTGAGAAGGGGGAAGCTGCAGGAGTGGAGAGAGTAGAG16.25No Hit
ACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGTGATCTC16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)