FastQCFastQC Report
Wed 27 Apr 2022
EGAF00003628604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003628604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences420700
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA7270.17280722605181842No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT5890.14000475398145948No Hit
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC5640.1340622771571191No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)