FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003629203

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629203
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length100
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCCTTCACGTTTCGTCCACCAACACCATCGCCATCACGGCGGGTGCT33.79746835443038No Hit
ATGGGTGACGGATGCTTCGACGCTGGCACGGCTGATGAGTTCCATCGCCT33.79746835443038No Hit
GAAGAAGCACTGCGCGCCACGGAGGGCAACGTCGCGCGCGCGGCGGACCT22.5316455696202533No Hit
GGCGCCGGGCGGCCTGCTGGTGGCGTCGACGATCAACCGCACCCTGCGCA22.5316455696202533No Hit
GGCTGATGCACGCGCAGGGCGCCGAGATTGCCTTCTCGCCCGGCTTCCGC22.5316455696202533No Hit
CCCTTCGCCAGCTCGCGGCCGATGAAGTCGGCGATCTCACGCGCCGTCAG22.5316455696202533No Hit
CTTGCAACTCGCTCAGGAGCCGCTGCGCATCCTGCTCCGAGACACCAACA22.5316455696202533No Hit
GATGCAGCATCGCGGCGCCGGCATCCACGCATTGGCGTGCGCAGGCGGCC22.5316455696202533No Hit
ATACCTGGCCGAAGACGACGCCGATGCGCTGCGCATCGCGCGCGAAGTTG22.5316455696202533No Hit
CTCCGCAGCCAGCTGCGCCGGCGTAAAGCTCACGCCTGCCAGGTTGTAGC22.5316455696202533No Hit
ATGTTGGCGAAATCCACATCGGTTGCCGTCTCGGCGTTGGCCAGCACGTA22.5316455696202533No Hit
ATCCTTGTGCACGCAACGCGCCCAGGCATGCAGGCGCGTCGGCGCGTGGC22.5316455696202533No Hit
GTGCGAGAAGGTCGACAGCGGTACCTGCGCACCCGTCGAGGTGATGATGT22.5316455696202533No Hit
TTTCTGGGGACTGCCACGGGTTGGGAAATCCGAGTTTGCCAAGTACTTCG22.5316455696202533No Hit
ATGTTCGATTACCCCCTTCTCATGGGGCGTCGATTCGCTTATTGCACCAG22.5316455696202533No Hit
TTCGACCACAGCGCGGAATTCGGCGGCATACGCGGCGTTCTGGTAGGCGG22.5316455696202533No Hit
GCCCGGAACTTCCACCTGCGCGGCATCGAGCTCCTGCAGGACGGCATCCC22.5316455696202533No Hit
AGCGATAAGCCGCCATGGTCTCTGACCAGCCATCGCAGGCGCCAGGAATG22.5316455696202533No Hit
GTCAAACGCCTTCGCAAGATCAAGGTCCCGGCCTTCGATGAAAAGAGTGG11.2658227848101267No Hit
GGTCTGGGCAGCCACTTCGCCTTGCGTGCGCCAGCTATGCACCGTCATGG11.2658227848101267No Hit
GATCTGGGATGTGCCGGTCGACGTCGCCTTGCCCTGTGCCACTCAGAACG11.2658227848101267No Hit
GCGCTACAACAACCGCGTATTGCGCAAGCGCCCGCAGGCGCAGGCGGTGA11.2658227848101267No Hit
ATAAAAAGGACGGGAGACCAGAGGGAATCATGGCGCAGGACATCATTCTC11.2658227848101267No Hit
ATGCTCCTCTGATGGATGTGGACCCAGTAGCTGGGACACTGGCTGAGGAT11.2658227848101267No Hit
TCCTGGTCGCCAATCGGTTGGGGTGGATCCACAGCACCGGCATCCAATTC11.2658227848101267No Hit
TTCCACCAGCTTGATATTGGACGACAACGACTTGCCGGCGCGCACGGCCT11.2658227848101267No Hit
ACATCGCCAAGGCGCAAAGCGAACTGGCCATCCAAGCGGCACAGATCGCA11.2658227848101267No Hit
AGGCCCGCGAGCGCGCCCGTCCGTGGATGAAGAAGGTCGGTTTGGCGGGC11.2658227848101267No Hit
GAAGGAGGGCGAGCGCTGGCTGAAGAAGCTGCAGACCCCGCCGCCCACGC11.2658227848101267No Hit
GGCCTGGCGATTATTTTGATTCTGGCGATGGTAGTGCTGTTTGCCATTGA11.2658227848101267No Hit
CGTCAGGCGCTCGAAGTCTTCCGTGTCGGCGTTGTGTGGTGGCGCACTTT11.2658227848101267No Hit
ATTGTTGTGTTCCTGGAGGTGTGAGTTGGGAAACAATTCCACAACCCGTA11.2658227848101267No Hit
GAGCCGAATCCGGCATGAAGGCTGGGGGCGGCGATCGCGGCGGCCTGCAG11.2658227848101267No Hit
AATGGGGGCCTTGCGGCGGATTTCAAGCCTGCTCATCAATAGAAGGTGCA11.2658227848101267No Hit
CCCGCCTCGGCTACGCCACCGGCGAGAAGTACGGCGTCACGGCCGACGAC11.2658227848101267No Hit
ACGCTCACCGTCACAGGCCAGCCGCCCCAAATTGAGCGCGTCAACGAGTG11.2658227848101267No Hit
GCCAAGACACCGAGCGCCGCGGATGAATACGCCACAGATTTATTCCCGCT11.2658227848101267No Hit
GCACCATGTCGTGCAGCGGCGGCGCGTCGGCCGACCAGTGCGCACCGCTG11.2658227848101267No Hit
GGCATTGGTTTCGATGGCGTCGAACATCCCTTCGTCTGGCTCGACGACAG11.2658227848101267No Hit
TCTTTCCAGTCGCCTTGGAAATATCGGTGAGGACGGGATTGTCGAGGTCC11.2658227848101267No Hit
CGCCGACGGTGATATCGAAGGCGCCGCGGCTTTGCTCCGAGACCTGTCGG11.2658227848101267No Hit
GTGTCAAGCGCTCAGCAATCATGCAGCGGCACCAGTCCGGGATGATCGAT11.2658227848101267No Hit
CATTGAGTTCCTTGGCCAGCGCCTTGAGGCCTCGGGAGTAAGCGCCAATC11.2658227848101267No Hit
CCGCTGGCGACCAACCCGCTGCCCGCCGTCCATCCGAACTGGGCCGAGCT11.2658227848101267No Hit
GAAGGAGGGAGAGCGCTGGCTGAAGAAGCTGCAGACCCCGCCGCCCACGC11.2658227848101267No Hit
GGTTCTGTGGCGCTGCTGAAAGGCCAGGAAATGGGTCGCTTTAAACTCGG11.2658227848101267No Hit
GCCCCGGGGCGGGTCTACCCGCCGCTGGACGCCCTGCCGGCCAGGGCGGG11.2658227848101267No Hit
CCGAGCGTGCCGCGAGGCTTGCGGCCCAGGCGGCAACTTCCTGCGCCTCG11.2658227848101267No Hit
ATGTTCGATTACCCCCTTCTCATGGGGCGTCGATTCGCTTAATGCACCAG11.2658227848101267No Hit
CGCGTGTATGGGTCCACCTTGATGATGCGCTTGAACTTGGCCAGCGACAG11.2658227848101267No Hit
ATCTGACAGGGAGCGCTCCCGGGCGGGCGGCGCTACACGGGTAGGTGTGC11.2658227848101267No Hit
GTCCTGGAGCGACGCCTCGAAGGGCGCGCCTATCTGGCTGACGAGTATTC11.2658227848101267No Hit
ATACCGGCCCGCAGGCCAAGCGAACCAAAGGGACCGCTGTAGACATTTTG11.2658227848101267No Hit
CCACAGGCTGTTCCCCAGCACGGACGCCCCCAGCGCCACGCCCATATTCA11.2658227848101267No Hit
GTGCCACGTTTCGATCAGGCGCTGCGTTTCCTTCAGGATGGCTTCTTCGC11.2658227848101267No Hit
ATGATGCCGAGCATCACCTCGTCCGCACCGCCGCCAATCGAGCCCAGGCG11.2658227848101267No Hit
GGTTCATTTGTGTTCCGTGGGCAGGCAACGGCGGTATCGGCGCTGGATGC11.2658227848101267No Hit
GCCACTGTGGTGAAACCCCGTCTCTACTAAAAAAAAAAAAAAAAAAATTA11.2658227848101267No Hit
TTCATGCGGTTGCCCGCCTGAATGACGTTGCCGAACACGACCGAATCCAC11.2658227848101267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)