FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003629204

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629204
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences79
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAATAGGCGATCACAAGCAGGAAGCCTATCAAAACCCACCTGGACCTG33.79746835443038No Hit
TTCCCTTCCTGGAATACGAAGAGCGGCAGGCCGAGCAGGCCCAGTTCGCC33.79746835443038No Hit
ATCCAAGAATTACTAACGCGAGCAACGCCAGAAATTGGCGATATTCATGC22.5316455696202533No Hit
CGCCAGTAGCGTGGGTGGAGGAATAGAAAACAGACGCATAGTCACCTCGT22.5316455696202533No Hit
CGGCGGCCCAGCCGGCCACCTTGTAGCGGCGGTCGGCGTCGATGGGCTTG22.5316455696202533No Hit
CTGCCGGACGGCCGCCACGAAGCCGTGTGGCACGACCCGTTCAAGAAACC22.5316455696202533No Hit
CACGGCCGACAACCCCGGCTTCTCGCCGGAGAGCATCGCGGAGATCGGCG22.5316455696202533No Hit
TTCCAGTGGCACCAGGCCAGCCGCGGCGGCGGCGGCCTCCAGCTCGTCCG22.5316455696202533No Hit
TTCCACTCGGCCGTCAAGGGCGAGCGTTATACGTGCTTCCTTGAGCACGA22.5316455696202533No Hit
GGATGTTGGGCGCGAGCGCCGTGTAGGCGGTCGGCGTGACGAAGTTGATC22.5316455696202533No Hit
CTCGCGGGCTGTTGAGCGAACTCCCAAGTTGGTCAGGGCCCGCTTGAGCA22.5316455696202533No Hit
GTTGTAAACCGCGGCGAATTGGCGTTTACTCTATGCTTTTGCCAAGCCGA22.5316455696202533No Hit
TCCGAGAACCATCCGATCGCCCAGTCGTTACGCGCCGGCACCTCGAATGC22.5316455696202533No Hit
GTTTGTGATGACGCCGACGCGCATGCCACAGATGGCCGCGTGCCCGGTGA22.5316455696202533No Hit
GAACAAGACCGCGTTCGAATGGGGCCGCCACCTCGCGCAAGACCGCGATG22.5316455696202533No Hit
GCGGCGATGTTGATCCAGTTCACGCTCACGCTGGTGGTGTGGCACGCGGT22.5316455696202533No Hit
GACCACATCCTGCTGGCGCCGCCGTTCATCGCCACCGCTCAGGACATCGA22.5316455696202533No Hit
ACATAGCCCCAGCCGCGCATCGCCGTGCGCACCTCGGCCTCCGACGGGAA22.5316455696202533No Hit
TACCAATACACACTGCAGGCCGACGACCTGAACGAGCTGCGCGCGTGGGA22.5316455696202533No Hit
GTTGACCGGCGTTGCGACCGGGGTGTTGTCATTGGCACTGGCCGTGCCGG11.2658227848101267No Hit
AAACAAGCCCAAGCCGGTCATCCCCCCGTGGTTCCGTGTGCCGCAGCCGG11.2658227848101267No Hit
GTGTGGTGACGGATGAAGACGACGTCGATGCGTTCGTAGTTCCGCTTCAG11.2658227848101267No Hit
GTGCAACCCGCCGCCAGCGCCGGAGCCCACAGCGCCATCAGCGCGTTGCC11.2658227848101267No Hit
GGTAGATGCCGGCCTGGCGCCCGGCCTCGAGCATCGACATGCTGCGAGCG11.2658227848101267No Hit
CTCTACCGGGAGGCTTTAGTTCGCTGTGGGTTAACCAGGAAAAAACCCGC11.2658227848101267No Hit
GTATCTTGACCCCTTTAGTCCTTCTTTGCCAGGGAGGGTGGTGAACAGAG11.2658227848101267No Hit
CAAGGGCAGGACGTGACGGAGCTGGCATCGATGGCCAAGCTCAAGGCCGG11.2658227848101267No Hit
GTCCGTTGCTGGGGTAATCGAGCCTCCAATGCGCGCTGAATTGCCTGCTT11.2658227848101267No Hit
GCGCGGGCGCCGTCACGATCCCCGCGCTCGGCGCCGGCGCGCCCGCGATC11.2658227848101267No Hit
TCATCACCGCGTTGTTGCGCGGCTTCGGCAGCCAGCAGATAGTTCACCAC11.2658227848101267No Hit
ACTCAACTTCGCCGTCGATGACTCGCCGGCGCTGACGCTTCTGGACGTGC11.2658227848101267No Hit
CGCAAGTAGCGTGGGAGCAGGAATAGAAAACAGACGCATATTCACCTCGT11.2658227848101267No Hit
CTCCAGGGCCTTCACGATCTCCGGGCGGGCCAACGGATCCAGGAACCCGA11.2658227848101267No Hit
GCCTTACCCGGGGCGAAAATGACGCCGGCGTCCTGGAAGGAATGCACCGC11.2658227848101267No Hit
CGCTCTTCTTCTGCACTGGCAGCGACTTGGTGGTCTGGAAATTCTCACGC11.2658227848101267No Hit
CTGTTCGATCGCTTCCTGCTGCGCATCAAGCGTCTGGCGCCGGCATTGCA11.2658227848101267No Hit
CCGAACCGGCATGAAGGGCGGATAGAATCGGCGTATTCCTACGGTGCCTC11.2658227848101267No Hit
ACGGAATACTCGTCAGCCAGATAGGCGCGCCCTTCGAGGCGTCGCTCCAG11.2658227848101267No Hit
CTCGCGATCCGTCTGCCCTGCAGGCTGAGCTGACCGCCGCGCTGTCCCAG11.2658227848101267No Hit
CACAGACGGGGCCGCGGCGGACGTCACGGTGAACTTGGCGCCGTTTTGGT11.2658227848101267No Hit
AGCCTGACGCGTGCCCTGCCCGCCGCGCAGGACGCCGAACTGTTCGGCTG11.2658227848101267No Hit
GCCGTGCGCTCGGCGAGCCTGGCGATCTCGGCCTTCTGCGCGGCATCGAA11.2658227848101267No Hit
GCCAGGACAGCAGCTGGCCGCCGTGCAGTGCCACGGTCGCCGTCGCGCCA11.2658227848101267No Hit
TCACTTCGCATTCGAAGGCGCCGCGTGGTACTGGCACTTTGTGGACGTGG11.2658227848101267No Hit
TGCCAGAGGAGGGTTTTCATACTTTATAACTTTTACCGATGATTTAAGTA11.2658227848101267No Hit
GATCGGAGGCTCGCCATGTTTGCGCAGGACATCGTGTTGTGTCATCCGGT11.2658227848101267No Hit
AACTCGCTCTGCATGAGGTGGCGCGTGTGCACATCCAGCGCCGAGAACGG11.2658227848101267No Hit
CCGTTGGTGCGTACAGGCATTGCGCACCTGCTACGGACGCTCAAAGGCGT11.2658227848101267No Hit
GTTCATTGTTGCTCCTTCATTCGCATGTTGAGCACACCAATCCCAGGGAG11.2658227848101267No Hit
ACCTCATCCATTGGCCAGCCCCGGTCAAGTACGGCGATGCGTACATCGAG11.2658227848101267No Hit
GCCCAAACTTAATCTACTATTTTGTTTGTTTGTTTGAGACAGAGTCTCGC11.2658227848101267No Hit
TACTGGGGCTTCTACGTACCGGTCGAACACCTGGTCAGCTACGTCGGAAA11.2658227848101267No Hit
CGTCAGCGTTTCCTTTGATGGATTAGACCTGGTCTTTTTTGTCGTCAACC11.2658227848101267No Hit
CCGTTCAACGCTGAGCATCACCAGGCCATGGCCATGCAGGAAAGCCATGA11.2658227848101267No Hit
TGCCGGCACCGTTCGGGCCGATGAGCGCATGGATGGACCCACGCTGCACG11.2658227848101267No Hit
CTTCCAACCTGGGCCGCCGGCGCTGCCTGGCGGGGGTGCCCCTGCTGGCA11.2658227848101267No Hit
GTCCTTAAAGCGATCGGTGGTTGCCACGCGGATGTTGGTGACCGCGTCGC11.2658227848101267No Hit
CTCACACATGGCAAGCCCGAGCAGACCGACTTCGTGCCGCTGATCGGCGA11.2658227848101267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)