FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003629418

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629418
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCCAAGGGTGCGCTAGCTGTGGCAGTGGCCCAGGTGTGCCGCGTGGT42.0100502512562812No Hit
GTGCATATACACCATGGAATACTACACAGCCATAAAAAAGAAACAAAATC42.0100502512562812No Hit
GACGTAGGCACTGCGGGCTTGGCCTGGAAGTTGTGGACTTTTCTAGTGAG42.0100502512562812No Hit
GGTCGCCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA31.507537688442211No Hit
ACTCCGCAGCTCCCCGGGGCCGATTTGGCATTCCCTGCTGCCCAGTGCAC31.507537688442211No Hit
ATGTAGCAGCAGGTGCCAGGGGCTGGCTTGTAGGCGATCAGCAGCTGCTG31.507537688442211No Hit
GCAAAAGACCCTTTGCCCGGGGCGTTTCCTTTCCCGTTGGGGCTTCCACT31.507537688442211No Hit
CTAATAGCCACAAGTGAATTCTGTTGAAAGGGAGTTCTAGCATCTCACAG31.507537688442211No Hit
CCTAGAACAGGGTAGAACACAGGCTTCGGCACACCTTCCATCCACATGAC31.507537688442211No Hit
GCCCCGGGCAAAGGGTCTTTTGCAGCTTTTGCAGACGGGCAAGAAGCTGC31.507537688442211No Hit
CGTCTAAGCTGGGCCAGGCAGAGGGGCGAGATGCAGGCTCAGCACCCTCC31.507537688442211No Hit
GTCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCTGAGTGT31.507537688442211No Hit
GAGCTCTTCATAGTTGATACAACCATTGCTGTCCTCATGCCCTGTCACCA21.0050251256281406No Hit
GTCCAGCTCCGTGGCAGACAGCAAATCATTCAGAGGGAAATCTTTCATCA21.0050251256281406No Hit
CCGCAGGGACAAGCCCTGGAGAAATGGGAGCTTGGGGAGAGGATGGGAGT21.0050251256281406No Hit
AGCGTATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGG21.0050251256281406No Hit
GGGTTGGTTTTGATCTGATAAATGCACGCATCCCCCCCGCGAAGGGGGTC21.0050251256281406No Hit
GACCCGGCCTTCCTGGGCAGGGCCGTGAGCACCCTGTGTGGCGAGGTGCC21.0050251256281406No Hit
CTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCAGGGGCTGGCTTGT21.0050251256281406No Hit
CTCAGGGCCTGCGTCCACATACAGCAGCAGTGTGGGCTGTCCAATCCGTC21.0050251256281406No Hit
GGGCCAGGCAGAGGGGCGAGATGCAGGCTCAGCACCCTCCGGAGGGGACC21.0050251256281406No Hit
GGCCTGCCACAGAGACCTCAGAGTGCCAGAGAATCTCCACTGTGTCCTTA21.0050251256281406No Hit
CTGCCAGACCCTCTGCTGGACAAGCTCGTCCTCCCTGTGCTGCCCGGGGC21.0050251256281406No Hit
GTTCGGGAGGCCTCTGCATTGGCCCGGAGCACAGCCCCTGGGGATGGATA21.0050251256281406No Hit
CCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG21.0050251256281406No Hit
CTCCGGGTCAGTGGAAGCCCCAACGGGAAAGGAAACGCCCCGGGCAAAGG21.0050251256281406No Hit
CACTCAGGGCCAGGCGTTGCTGGGCTTCCGGCGCCCCAATGCTCATCTCC21.0050251256281406No Hit
GTTCCCGGGCCCCTGGGCGCCACCTCTGCCCACTCCCATCCTCTCCCCAA21.0050251256281406No Hit
GCCATGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATC21.0050251256281406No Hit
CCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCA21.0050251256281406No Hit
CTCCATTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTT21.0050251256281406No Hit
TCCTGCCCTTATTCACAGCTGGCGGGTAAGAACTGGGTGAAGATAAGTTT21.0050251256281406No Hit
CTGATTCCCCGTCACCCGTGGTCACCATGGTAGGCACGGCGACTACCATC10.5025125628140703No Hit
TCCTTCCAGTGTCTGCACACATGTTTTATTCTGATAATCCCATATTTTAA10.5025125628140703No Hit
GGTCACATCTGAAGGCGGCTCTAGGTCACCCTAGAGGCCTAGGCTGGCTG10.5025125628140703No Hit
CGCGACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGG10.5025125628140703No Hit
GCCTCGTGGTGTATGACTACCAGCAGCTGCTGATCGCCTACAAGCCAACC10.5025125628140703No Hit
GTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA10.5025125628140703No Hit
GCTCTCACTAGAAAAGTCCACAACTTCCAGATGGAATGCTCTCTGCAGGC10.5025125628140703No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT10.5025125628140703No Hit
CACCCCGAGGGCCTGGCAGGTGGTGTGGGCATCCCAGCCCCTGGGCACCA10.5025125628140703No Hit
GGCGAGATGCAGGCTCAGCACCCTCCGGAGGGGACCCGGCCTTCCTGGGC10.5025125628140703No Hit
AGCATATGCTACTGGCAGGATCAACCAGGTACCCATGTACTCCTGTCTCT10.5025125628140703No Hit
CTTCCTGCCCAGGACAGAGGCTGATGGGAAATCCTACGTAAAGTACCAGG10.5025125628140703No Hit
GCTCCTGCCCTGGTGCTGCTCCCAGCATCTCACAAGACCCCACTCTGTCA10.5025125628140703No Hit
GCCCAGCAACGCCTGGCCCTGAGTGAGCACCTGGTTACCACTGCCACCTT10.5025125628140703No Hit
AAGTGGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGC10.5025125628140703No Hit
GAACAGCAGCGAGCAGGCCATACCACAGGCAATGCTCCAGGCCTGTGTTG10.5025125628140703No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA10.5025125628140703No Hit
CTACTGACTATCCTAGAAATCGCTGTCGCCTTAATCCAAGCCTACGTTTT10.5025125628140703No Hit
TGCCAAGAATGTTTTCATTAATCAAGAACGAAAGTCGGAGGCTGTCTCTT10.5025125628140703No Hit
GTTCTGGAGATGAGCATTGGGGCGCCGGAAGCCCAGCAACGCCTGGCCCT10.5025125628140703No Hit
CCACCAAGCCCTGTGTCACGACGGCAGCGGCTGCAGTCACCAGAAACAAT10.5025125628140703No Hit
ACACAGGGGCAGCCACCTCGGGGATGGGTGACTCAACCTCTCTTCCCGGC10.5025125628140703No Hit
GCCCAGTGCACCTGAAACGCCTTTTTATCGTGGTGGTGGTGGTGGTCCTC10.5025125628140703No Hit
GTATTGTATTTTGCAAAAAGTGCTGAAATAACAGGAGTTCGTTCAGAGAC10.5025125628140703No Hit
GTTCAGCCACCCGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATG10.5025125628140703No Hit
ATGTTTGGATGTAAAGTGAAATATTAGTTGGCGGATGAAGCAGATAGTGA10.5025125628140703No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA10.5025125628140703No Hit
GAAGTAGCCAGGTTCAACTATGCTGATTTTCACCCCAAAATGTTGAATCT10.5025125628140703No Hit
GAAGAAAAGGCACTGACCATGGAAGTGATCCGCCAGGTGAAGGGAGACCT10.5025125628140703No Hit
AGCAAGCATTGCAGTGCAGAGCCCTAGGGCATTGCCTACAGGAAGTCTGG10.5025125628140703No Hit
TCTTGAAAGCCTGCTGTGTGCCAAGCCTTTCCCCAAAGGAGGATCTGTCT10.5025125628140703No Hit
GAATTCCTGAGCCCGGCCACAAAGGAATTCTTAACAGGACCCGTTTAGAA10.5025125628140703No Hit
GGCCTGGAGATTGCCTGTGGTATGGCCTGCTCGCTGCTGTTCCCGGCCTG10.5025125628140703No Hit
GAGCGTGAAGAAAAGCGGGTTTTGGGTCTGGTGCTGTCTCTTATACACAT10.5025125628140703No Hit
CCTGATGGAGAGCCCGCCGGACTACTCCGCAGCTCCCCGGGGCCGATTTG10.5025125628140703No Hit
CTTGGATGACACCTTGTCCCTCTGCTTCTCATCTTCAGCTTTGTACTTCT10.5025125628140703No Hit
ATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTC10.5025125628140703No Hit
CCTTCGACCTTGCCGAAGGGGAGTCCGAACTAGTCTCAGGCTTCAACATC10.5025125628140703No Hit
GGTGGCAGTGGTAACCAGGTGCTCACTCAGGGCCAGGCGTTGCTGGGCTT10.5025125628140703No Hit
GTTTGGGCCCCATTGGTGGGAACTCCCCAAGGCGACTAGGGAGCCGAAGG10.5025125628140703No Hit
GTGCCACCAGGTGCCGGGTGGGGGAGGGGAGAAAGCTGTCTCTTATACAC10.5025125628140703No Hit
GAGCTGCCGCAGGGCCAGACCGGCTCCGTGGGCACGAGCGTGGCTTCGGC10.5025125628140703No Hit
CTTGTAGGCGATCAGCAGCTGCTGGTAGTCATACACCACGAGGCCAGTGG10.5025125628140703No Hit
GGCCTGCAGAGAGCATTCCATCTGGAAGTTGTGGACTTTTCTAGTGAGAG10.5025125628140703No Hit
GCTGCTGATCGCCTACAAGCCAGCCCCTGGCACCTGCTGCTACATCATGA10.5025125628140703No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTA10.5025125628140703No Hit
TTTCTCCAGGGCTTGTCCCTGCGGTGTGGGCAGAAGCAGCTTCTTGCCCG10.5025125628140703No Hit
GCCCAGGCACTGCTGCCTGGACCACCTCATCCTTGGCCTGTGCCCAGGGC10.5025125628140703No Hit
CCCTTTTGGATCTTCATGCCCTGGGTTCTGCCCGCACGGACCCCCATCTC10.5025125628140703No Hit
CAAGGAGAGCCCCCAGGAGGAGGAGATCGATCCCTTCGATGTGGATTCAG10.5025125628140703No Hit
CTCTTGAAGTTTGTGAGCACTTTCAGCACCACGCCCTGGGCTCGCTCCTT10.5025125628140703No Hit
TGCGAGGCCTCTTGCCCCTGCCGAGCCCTGCATGCCTGGGGCACCTACTT10.5025125628140703No Hit
GTGAGGATGAGGAGAGCTATGACACAGAGTCAGAGTTCACGGAGTTCACA10.5025125628140703No Hit
GAGGTGGGCCACCTTGGGGGGAATAAGTTTCCAACGGGGACAGCTTCAGG10.5025125628140703No Hit
GACTGGGGATGCTCTCTGGAGCTATCTTCATGATGTAGCAGCAGGTGCCA10.5025125628140703No Hit
CTCCCATCCTCTCCCCAAGCTCCCATTTCTCCAGGGCTTGTCCCTGCGGT10.5025125628140703No Hit
GATCAGGGGCCCTGGGATCACACCTGCTCACCGGAGGCGTCCTAGATGTA10.5025125628140703No Hit
GTGTGGAGATGTACACAGATGGGCAGTGGAATGACAGGAACTGCCTGTAC10.5025125628140703No Hit
GGCCTTCCTGGGCATGGCCGTGAGCACCCTGTGTGGCGAGGTGCCGCTCT10.5025125628140703No Hit
GTGGGCATTCACACCACCCCCCACACCACTGGCTCTGCTTTCTCCTTTCA10.5025125628140703No Hit
CTCCGGTGAGCAGGGTCAGTGGAAGCCCCAACGGGAAAGGAAACGCCCCG10.5025125628140703No Hit
GATCCTGCTGCTCCTTGGCCTCTCTGGCCTGGGCCTTGGCAGCTTCCTCC10.5025125628140703No Hit
GTCCAGCAGAGGGTCTGGCAGAGGGTCCCGCAGAGGTTTGGGCAGGGGGT10.5025125628140703No Hit
GCCAGAGAGCGTCCTCCCTGTCCCATGGCCTAAAATGCCTCTCAGAACTC10.5025125628140703No Hit
CTGCCCACACCGCAGGGACAAGCCCTGGAGAAATGGGAGCTTGGGGAGAG10.5025125628140703No Hit
GCAATTCCCCATTCCTCTCCCCTATTGCTGGCTCTGCAGGGGGCTGATCA10.5025125628140703No Hit
CACCTGGGCCTGTGCAAATCCCGGCAGCCAGAGCCAGAGCAGGAGCCAGG10.5025125628140703No Hit
CTGACCCCCTGAAGGTGTACCCGCCACTGAAGGGGAGCTTCCCGGAGAAC10.5025125628140703No Hit
AAATAAAGTAGATGAATAAAAAGGCACACTCGAAAAATTTGAGCGCAGAA10.5025125628140703No Hit
GGGCAGCAGGGAATGCCAAATCGGCCCCGGGGAGCTGCGGAGTAGTCCGG10.5025125628140703No Hit
GGTCAGCCCCTCTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGG10.5025125628140703No Hit
CCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCG10.5025125628140703No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT10.5025125628140703No Hit
CCTGCAGCAAGATGAATGTGGGCAGCAAAGAGGTCCTGATGGAGAGCCCG10.5025125628140703No Hit
TCCCGGGCCCCTGGGCGCCACCTCTGCCCACTCCCATCCTCTCCCCAAGC10.5025125628140703No Hit
GCAAACCAGTGAACACCTTTGTGCACGAGCCCCTGGTAGACTGTCTCTTA10.5025125628140703No Hit
GGACTGTGAGGTGCCAAGTCCTCAGTCTTGCCTGTCTCTTATACACATCT10.5025125628140703No Hit
ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG10.5025125628140703No Hit
ACCGGAGGCGTCCTAGATGTAGTAGAGCGGCACCTCGCCACACAGGGCTG10.5025125628140703No Hit
TGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGAGCCAGAAACAC10.5025125628140703No Hit
AGATAGCAGCACAATCAATGTGGCGGTAGCCTACGCTCTGTCTCTTATAC10.5025125628140703No Hit
TGAGCACCCTGTGTGGCGAGGTGCCGCTCTACTACATCTAGGACGCCTCC10.5025125628140703No Hit
CCACCAGCCTGTGTGCACAGCAGCTGTGCCTCCGTAAATGGTTTTACAAA10.5025125628140703No Hit
CCCCTTCAGTGGCGGGTACACCTTCAGGGGGTCAGCATTCTGGAGCAGGT10.5025125628140703No Hit
TGCCAGTAGCGTATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTA10.5025125628140703No Hit
GATGACCACATTCAAGGAAAAACCTTCTGCCCCAGCTTTGCAGGATGAAA10.5025125628140703No Hit
CTTCTTGCCCGTCTGCAAAAGCTGCAAAAGACCCTTTGCCCGGGGCGTTT10.5025125628140703No Hit
CCCTCCGGAGGGGACCCGGCCTTCCTGGGCATGGCCGTGAGCACCCTGTG10.5025125628140703No Hit
ATCTAGGACGCCTCCGGTGAGCAGGGTCAGTGGAAGCCCCAACGGGAAAG10.5025125628140703No Hit
CATGTGGACATTACTGATCCAGGTAAGCCCCACCAGCCAAAGAAGAAAGG10.5025125628140703No Hit
GAAGTAGACAGACATAAGCTGAGAGAGAGAGAGACAGAGAGAGATCAGAG10.5025125628140703No Hit
CAGCATGAGCCCTTGGTTCTGGAATCCTCCCAGTCAGATGCTGTACTGAC10.5025125628140703No Hit
CCCATGTACTCTGCGTTGCCCATGTACTCTGCGTCTGTCTCTTATACACA10.5025125628140703No Hit
TTTCTAGTGAGAGCCTCAAGACTGGGGATGCTCTCTGGAGCTATCTTCAT10.5025125628140703No Hit
ATCGTAGCCCCTATGAGAAGGTTTCTGCAGGTAATGGTGGCAGCAGCCTC10.5025125628140703No Hit
GGTGTATGTTGGGGGTTTAGAGAGCAGGGTCTTGAAATACACAGCCCAGA10.5025125628140703No Hit
ATCCTGGATACGGGCACGTCCCTCATCACAGGACCCACTGAGGAGATCCG10.5025125628140703No Hit
CCTCATCGTCGTGGTGATTGTGGGAGCCCTGCTCATGGGTCTCCACATGA10.5025125628140703No Hit
GTATCAACGCAGAGTACATGGGAAACGCCCCTCTTCGTCTGATCCGTCCT10.5025125628140703No Hit
GCTCGTAGTTGGATCTTGGGAGCGGGCGGGCGGTCCGCCGCGAGGCGAGC10.5025125628140703No Hit
CTTTTATGAGAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.5025125628140703No Hit
CCTGGCACCTGCTGCTACATCATGAAGATAGCTCCAGAGAGCATCCCCAG10.5025125628140703No Hit
CCTTTCCCGTTGGGGCTTCCACTGACCCTGCTCACCGGAGGCGTCCTAGA10.5025125628140703No Hit
GAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCGTATGCTTGTCTCAA10.5025125628140703No Hit
GGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCT10.5025125628140703No Hit
GTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTACAGGGCGTTTATA10.5025125628140703No Hit
GGATGAGACAGAGAAAGCCAAAGTTGGCAGCTGCCCTGAAAATCCCTGTC10.5025125628140703No Hit
GTGCTGAAATCCGGCATGTTCTTGTCACACTGGGTGAGAAGATGACAGAG10.5025125628140703No Hit
GGATATAGGTTGCGCCGTCCACGGCCCCCGGGAACTTGACCTGTCTCTTA10.5025125628140703No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTAATGTCTCAGTTATA10.5025125628140703No Hit
CCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG10.5025125628140703No Hit
GCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAG10.5025125628140703No Hit
GCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGG10.5025125628140703No Hit
CACTTCCTTTATAACTCCATCCACAGAACCGCAGTCCTTGAACTGCACCG10.5025125628140703No Hit
CCTGTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGA10.5025125628140703No Hit
GTCTTTTGCAGCTTTTGCAGACGGGCAAGAAGCTGCTTCTGCCCACACCG10.5025125628140703No Hit
TGCCCAGGAAGGCCGGGTCCCCTCCGGAGGGTGCTGAGCCTGCATCTCGC10.5025125628140703No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA10.5025125628140703No Hit
CCCCAGTTGGCTCAGAACTCGCAGACCACAAGACGCTTTTCTCCACAAGC10.5025125628140703No Hit
GTACATGGAGGAGAGGAGAGCATAGCACCTGCAGCAAGATGGATGTGGGC10.5025125628140703No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)