FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003629548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences187
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATGGATTCATTGATATCAGCAAGGACCACTTTGCCAGTTTCTCCGACC42.13903743315508No Hit
GGCCACGGCATCGCGGCCAAAGCCTTCCTGGGTGACAAAGCTCTCGGCCG42.13903743315508No Hit
ACGTCGGCTAATGGTGAGAAGGTAGGGATGATATATTGGAAAATAAGCAT31.6042780748663104No Hit
GGCCAGACCGACCTCGACATCTTCGCCTGCATCGCCGGGCCGAGCACCTG31.6042780748663104No Hit
CCACGAAGCCGCCATCCGCCAGCGCGGTGACGTCCGCGTCGCGGTCGTCT31.6042780748663104No Hit
CTGCGACACGCCCGCTGGGGCCGATCCTGCGTCCGGCAGGCCGCGATCCA31.6042780748663104No Hit
GGAACTGGAAGTCAGCTTGCACATGGCGTTCGTCGAAGCGCGCCAGGCAC31.6042780748663104No Hit
GTCTCCCAGTGGTGCCATCTTGGCTCACTGCAACCTTCACCTCCCAGGTT31.6042780748663104No Hit
ACATCGACGCCGGGGCGGGGCGACGTGAACGTGCCGCCGATGGTGATCGG31.6042780748663104No Hit
GAGCAATTTCAGCACCTCATTAGCTTGCAAATGCCCTATCATCGATGAAA31.6042780748663104No Hit
ATCTTTGCCTGTCTTGTGGTCGCGCATTCCTCGACGGCCCGGCTGATCTT21.06951871657754No Hit
GCGCCACGGCAGGAAGGCACTCCCTATGTGCTGCCGTCTCCAAGCCATCC21.06951871657754No Hit
CCTGCTGGAGTGGGCGTGGCCGGAAGTGACGTAGGGGGGCGTGGCGTGAC21.06951871657754No Hit
GGGCGCACGAAGTCCCCCCGGCCAGTTCCTGGCCCGACTCGGGTGGGTGG21.06951871657754No Hit
GAGTCCATTCAGTTCCTGAGGTTTTTTGCCTTCCCTGAAGGGGCCGCGCA21.06951871657754No Hit
ATTCACCAGACCTTCTTCGGCCCGGCCCCGACCCAGCTGGACCGCGTACC21.06951871657754No Hit
CTACTGCAGGCCAGAGTGTGAACAGCAGATCGTCACGTGCCTATGGAGGG21.06951871657754No Hit
GGCATGCCCAAGGGCACGTTCAGCCTGATCCAAGGCGGCAACCGGAAGGC21.06951871657754No Hit
GGGCAGCTCGCCGTCGCGCTCGGGGTCCCAGCCGTCGGTAATGGAGAAGG21.06951871657754No Hit
AGGCGGCGTCGGTGACCACGGGCAGCCGGCCACCGTCGGTAGCGTCCAGC21.06951871657754No Hit
ACCCGCGGGCGGGTGGTGGCTGGACCGGCGGGCCCGTTGATGGCGTGATC21.06951871657754No Hit
GATCCGGGTCACGGTGACGGCGCGCGGCATCGACCGCCTGCTGCCGCTGC21.06951871657754No Hit
ACCCCGCGGACGCCTTCGCCAACGACGACGTCCGCGCGTCGGCGCGGGTG21.06951871657754No Hit
GGTTCACCCTGCCCGTTCCACGCGACGGCCACCCGTGCCACCGCGGTCGG21.06951871657754No Hit
CCAGGCTGGAGTGCAGTGGCATGATCTCGGCTCACTGCAGCCTCCGCCTC21.06951871657754No Hit
GTACCAAACCACACAATCAATGAGCTTGTAAGAAGGTTGAGAATACTCCC21.06951871657754No Hit
CGGTGAAACTCCGTCTCTACTAAAAATACAAAAAATTAGCTGGGTGTAGT21.06951871657754No Hit
GTGCCGAGCTTCATCGCCAGACCCATGTCGCCATCCACCTTCAACCGGCC21.06951871657754No Hit
GGTTTGTACGACCTTCGCGCCATTCGGCAGGGCATCTATGCCGATCCCGA21.06951871657754No Hit
GATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCTGAGATCGGGA21.06951871657754No Hit
GTCAAGGAAGTCGCCGATACCGTCGCCACCGCGCTGGCAGGCAAGCCTGC21.06951871657754No Hit
GCTCTCAACTTCAGCAATGCAGAACATATTGACTCCTGGGTCCTGCTGAT21.06951871657754No Hit
CCCCAAGGGCGACACCCCCTAATTAGCCCGGGCGAAAGGCCCAGTCTTTC21.06951871657754No Hit
GGGGGGCGCAGAACGGGATCGCCTGGCCGTTGTCGAAGAAGACGACGTTG21.06951871657754No Hit
GGCTCCTGAAAATGAAATCATTCGTATGCCAGCAAGATAAAGGCGAGCGC21.06951871657754No Hit
CTTGAAGACCCCTCGGGAGATGATCGAGCGCTGGATCTCGCTCGTCCCCT21.06951871657754No Hit
ATGTTGGAGTGGTGCTCCATCTCCGAGATGATGATCTCGTCGCCGGGCTG10.53475935828877No Hit
GTCGCCATCATCAAGCACGCCAACCCGTGCGGCATCGCCGTCGGGGCTGA10.53475935828877No Hit
GTAACTGGATATTTGGATAGCTCTAACGATTTCGTTGGAAACGGGAATAT10.53475935828877No Hit
CAGAGCAGATTTGAAACACTCTTTTTGTGGAATTTGCAAGTGGAGATTTC10.53475935828877No Hit
CTGTCTGCCAGCTCGCCCGCGACCAAGCTCTATGGGGTGGTGGGGGTGCA10.53475935828877No Hit
GCTTGAAGAGAGGTCCCGTGACTTGGCAGAAGAAAATTTGAAGAAAGAAA10.53475935828877No Hit
GTGTTCGACCTGCCGCAAGCTGCACCGAAAAGGCGTGTTTCCGCCCGGTT10.53475935828877No Hit
CACCAATTCTCTGAGCCTCTCATATGGGCACTTAATCTATTTATTCTTTT10.53475935828877No Hit
ATTTCAATCTTTCATGTGTGAATGTTTTAACTCTTGCAGCTTCGAAGAAC10.53475935828877No Hit
CTTCATGGGCATAGCGAACTCCAGAATGCGCCCAGGGAATTCGCCCTGTG10.53475935828877No Hit
CCTCAGTCTCAACAACCACATTTCAAGTGTCCAATAACCACATGTGCTGG10.53475935828877No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.53475935828877No Hit
GGCAACATGGTGAAACCCCATCTCTACTAAAAAACAAAAACGGCATGGTG10.53475935828877No Hit
GGGCATGGCGCGGCGCCGAATAGTCGAAATCGCCCGTGCGGATCTCCTTG10.53475935828877No Hit
CCCACTGTGGCCTCCCAAAGTGCTAGGATCACAGGACCGTTCTGACGGCG10.53475935828877No Hit
CCCGCCGGTGACGGTCGGCTCGCCGCGGTGGCCGTCGCGGACGTGGCCGA10.53475935828877No Hit
CTGGTGGTCTCGCCCTACTTCGTGCCGGGCCCGGACATGATGGAGGCGTT10.53475935828877No Hit
GGGTCGACATGCGCGAAACCCTTCACGTTTTGCCCGGCCGCCGCAAGGGC10.53475935828877No Hit
TTTCCGGGGATCGCAGTGGTGAGTAACCATGCATCATCAGGAGTACGGAT10.53475935828877No Hit
ACCTCGCGCATCGCCCAGAAGCACCGCGAGATGGCGCGCCAGCTGGGCGC10.53475935828877No Hit
AAAGTATTCCAGCAAAATTAATGAAGGTGATACACAACAGCCATAAGTCT10.53475935828877No Hit
GAAGACGACCTGCTGGCCCTGCTCGACGAAGACCATCTGGCCGGCGCCGC10.53475935828877No Hit
GAGGCCAACGGTCGCGTTGTCGACCCAGAGCACGCTCAAGCTTCGAGTCG10.53475935828877No Hit
ACGCATCGGTCGGCCAGCAGCCGCGAGGCGTTGGCCAGCAGGCGCGCGGA10.53475935828877No Hit
CCCACTGTGGCCTCCCAAAGTGCTAGGTTCACAGGACCGTTCTGACGGCG10.53475935828877No Hit
GCCTTCAACCGCCAGATCGGCGCGCTGGCCGGCGTGCGCATGAGCCCCGA10.53475935828877No Hit
TTGCGGTGACCCAAGATCATGCCATTGCCCTCCAGCCTGGGCAGCAAGAG10.53475935828877No Hit
CATGTTAGCCATTACTCAAAACTGCCTCCCTATCTGCCATCTAGTTGTCT10.53475935828877No Hit
CGTGTAGGCCCAGCGCAGCAGCGGGTCGGCAAAGAAACCCGGCGCGGGCA10.53475935828877No Hit
TTGACCGAGACCCACCACCGCCGCCGCATGGTGTTCGACCCGACGATCAA10.53475935828877No Hit
GTGGCGGACAGGCTCATGCCCAGGCTCCCCTGCATTGGACTCGCCAGAAC10.53475935828877No Hit
GCGCCTCGCCGAGGGCGACCGGATCGCCGGGCGGCACGAGCAGCGCGTCG10.53475935828877No Hit
ATTTTATACCAAATGACTTCTATTTTTGTGTGGAGAGGCAGAGGTCAGAT10.53475935828877No Hit
ACCTCAGGGAATCACGAAAATTCATTGCCACGCTGACCGATCCTCGTGGC10.53475935828877No Hit
GTCGCCACCACGCCGAAGAAGACTAACACGAACACCTCGCCCAGACCGGC10.53475935828877No Hit
CGCCGTCGTCAACCTGCTGGAACAGCACTTCGAGCAGCTCGTCGACTTCG10.53475935828877No Hit
GAATGGAAGAATCCATGGACTCGAATGCAATCATCATCGAATGGAATCGA10.53475935828877No Hit
CGAAGCAGGTCTGCGTGCCCTTGCCGGCCCCCTGGGTCCACACCAGGGGC10.53475935828877No Hit
CCGCCGAAGGCGCGCGTGCCGCGGCTGCGCACCTCGACGAAGACCACGGT10.53475935828877No Hit
GAACAGGAGAAGTAGTAACTTTGCAGTGCAGAAGCCTGGAAAATACCACC10.53475935828877No Hit
ATGCGCCCAGAACGGCCTGGCGTTTGTGTGTTCCCCCCGAAATCAGAATC10.53475935828877No Hit
CACAATTAAAATCCACCCAGACATCAGCTTGAAAACCAGCCAAGGCAGCC10.53475935828877No Hit
GACAGAGCCTACTCAAATGAGAAGGAACCAGAAAACCAACCCTGGTAATA10.53475935828877No Hit
CGCCAGGGCATCCCCCGGGGTGTCACCGGCACCCAACCGGGTCGCCAAGG10.53475935828877No Hit
CGGCAAGGGCGGGGATGGCCGTGAGGATTGTGCGGCGGTCGATCATCGAC10.53475935828877No Hit
GCCACGCGCCCAGCCACATCGGGTTCGACCCGCTCTGGGCGGCGGCCGAG10.53475935828877No Hit
AGCCCGCCCTTGCCGGCCGTCGGGCTCTATGCCGCGGTCGGATCGCGCGG10.53475935828877No Hit
CTCGTGTTGATTCCATTCCCTTCCATTCCATTCCATTCCACTCCATTCAG10.53475935828877No Hit
GCCCGCCGATGAGCGGGCCGGTCGCGATGCCGACACCGAGGGCCGCCTCG10.53475935828877No Hit
GAACCCGAAGGTGGAGGTTGCAGTGAGCTGAGGTCGTGCCACTGCACTCC10.53475935828877No Hit
TAGTAGAGACAGGGTTTCACGATGTTAACCAGGATGGTCTCCATCTCTTG10.53475935828877No Hit
GTCCAGCAGCTTCTGGTTCTTGCGGCTGCGCGAGCCATACAGGCGAGCGC10.53475935828877No Hit
GTTGTATCCATTCCATTGCATTCCATTCCATTCCATTCCCCTTCAGTCGG10.53475935828877No Hit
CGGTGAAACCGCTGCCCACGGAGGTCGCGGCACCGCCCATCCAGCTCCCG10.53475935828877No Hit
CTCCAGGACAACTCCACCGTGGTGCTCCCCTCCTGTCGGCCCGGCGGGTC10.53475935828877No Hit
GTCGCGCTTCGAGGAGCACCACGGCGTCAAGTACTCGTCGAATGCGCTCA10.53475935828877No Hit
ATCCATCTCAGCTCCAAATTCACGATCATATCTGCTAGGAACAAAGGGCT10.53475935828877No Hit
GTGCTCGCGAGCGCGGACCTCGAAGGCGTCTGGCTCTGCCGCGAGGAGGT10.53475935828877No Hit
GTCATGAACCAGCTCGGGCCGAACACGCCCGGCTTCCGACCGGTCTGCTC10.53475935828877No Hit
GTCGGGGCATGCTCCGGCTCGCTGGCCGCCACGTACTCCGTGTAGCCGGA10.53475935828877No Hit
TAGCGTGACCCGGCTTGGGAGCTCCGGGCTTGGGGGCACCGGGCTTCGGG10.53475935828877No Hit
AATCCCAGCACTTTGGGAGGCCGAGGCAGGCAGATCACTTGAGGTCAGGC10.53475935828877No Hit
ACGACACCCGCATCCGGCCCGGTGGATTGACGCCGCTCGTGCATTTTTTC10.53475935828877No Hit
GAGCGCAGTTAGTGAATTTTGAACGCTATTTTTTTGAGAGACACCGCGGT10.53475935828877No Hit
GAGGATGTTGCCCCCAGATGAAGTAAAGATATTACTTCCTTAAAAACCAA10.53475935828877No Hit
GCATTCTCCTGGGATAACTAAGGCAGCTTTGTCCTCAGCAAAGAATGGTG10.53475935828877No Hit
CCCCAGGCTGGAGTGCAGTGGCTAGATCTCGGCTCGCTGCAAGCTCCGCC10.53475935828877No Hit
GTAGAACACCGAGATGACCTTGCCGGCGCCCAGGCCGATCTTGTCCATGA10.53475935828877No Hit
GTGGACGTCGCTGAAGAGACGAAAACCCAGAGGGCGCAACGTTTCGAGCG10.53475935828877No Hit
GTGGCAAAGGAATGTGGAACGGAGTGCCAAATTAAGAGTAGGACACTCAG10.53475935828877No Hit
ATTCTGTTCCATTGATCTGTTTGTATTTTTATGCCAGTACCATGCTGTAT10.53475935828877No Hit
GAATGGCGGCTCAGGTTGATCTCGCGATAAGGGGGCCGGCGGCCTATGGT10.53475935828877No Hit
GAGACCGTGTTGGTGCTCGAACCCACCGCCGTCGGCACAGCCGGCAGGTT10.53475935828877No Hit
ATACAGGCGATACCGTGCTGTTGTAGATCGCGAATAATATCCAGTAAAAC10.53475935828877No Hit
GGTTATGCTAGTAGTAAGTTCGAACCTTGGTTTCACTGAAGATGTGCTCG10.53475935828877No Hit
GTCCTGGCCAAGCCTGCCGAGCAGACGCCGTTGGTTGCGGCCGAGGCCGT10.53475935828877No Hit
GGTCTGCCACGTGCTCGGCATCAGCGGGGTCGACCCGGTCCGGCACGGCC10.53475935828877No Hit
CCGCTCGTCAGAGCCTTCGGGTCGCAGACCACACCGCCTTTCGCGCCGCC10.53475935828877No Hit
TCGCGATCTCGTGCCTGAACCGATGATCGTTGACGTCGATGCCAATGAGG10.53475935828877No Hit
GGAACTCATTGATGAGTACTTCACCGGAACGACGAGTCGCATCGCGGGGG10.53475935828877No Hit
GGTTTTCACCACATTGGCTAGGCTGGTCTTGAACTCCTGGACTCAAACAA10.53475935828877No Hit
GTTTCCCACTTAGCCGTGACTTGGGGGCCTTAGATGATGGTTAGGGTTGT10.53475935828877No Hit
CGGTCGGACCCAGCACCTCGGGCAGCCGGCGGGCCCAGTCCTCGGCGTCC10.53475935828877No Hit
GGATGATGAGGTACAGCCGGCTGACGTCGTTCTGCTTGAAGAGGAACATG10.53475935828877No Hit
GGTTATAAGTCAGACTCGCTACATTGTCGTTACTCAAGCCTAAGAAGTTC10.53475935828877No Hit
GCGTCGGCCTCCTCCGGGGTCGGCGCCTTGGCGGTGAGCCGCACCTTCAG10.53475935828877No Hit
GCCCTGACCTACCCAGCTAGATATCCTAGAGAAAATCATTGCAATACCTC10.53475935828877No Hit
ACCATAGCGAGCTCATCCAGCAGAGCCAGGTCCTGTGGAGGATGATTGCA10.53475935828877No Hit
ATTTGGAGCGGATCATTCAAACAATCACAAAAGGTCCGGCGAATTCTCAG10.53475935828877No Hit
ATGGGAGAAGATTTTTGCAATCTACTCATCTGACAAAGGGCTAATATCCA10.53475935828877No Hit
GATCTCTCTCTTGTTCTGTTGGCACCAGAGAAACTACCTGGACAGGAAGT10.53475935828877No Hit
TGCCGGTCCCGATCGCGGTCATCATGTCGATGCGGAGGTCGGACGCGACC10.53475935828877No Hit
GCCTAAGATCATATAGTAAGCAAGTTCATTCTGTTAGAGCACAGAAGGGC10.53475935828877No Hit
GTGTGCCGTTGGTGATGCGGCCGCCGGTCAGCGTCACGCCGCCGTTCTGG10.53475935828877No Hit
GGCCAGTTTCGAAGCGAGGGCGTCCAACGCCGGCCCATCGAGAGCCTGTC10.53475935828877No Hit
CTTAAGGACTGTGAGTGACGAATGAAGCAGAGTCACTGGTATCTTTTGAG10.53475935828877No Hit
ACCCAGAAAATTCTCTTGAGCAGCCAGCTTGAGCCCGCTCCCACTCTGTG10.53475935828877No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.53475935828877No Hit
CTGTCGGAACGATCACGCTGCCGTCTTTCTGCTGGTAGTTCTCGAGCACG10.53475935828877No Hit
GCGTCAGAAGACGCGCCAGCACCACGGAGGCCGCAAACTGCAGGACGATC10.53475935828877No Hit
GGTCAGGGCACTCGTCGGCTGCTCGGTGTAGAGGTTGTGGACGATGTTGC10.53475935828877No Hit
GTGCAAATGGGTTGAGAGAAAGGTCTGTTTGCGGTCTTGGAAATGAAGAT10.53475935828877No Hit
AGGTAGGGGCGAGTATCGTCAAGCGGATTGGCAAGTTTGACAGTTGCGTG10.53475935828877No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)