FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003629636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTGCGTCTTGCCTCTCATCCCTGGCTATCTCAGCTATGTGACAGGCC42.094240837696335No Hit
GCAGCGCTGTGCCGAAGCGGTGGCAGACGAAGTCGTCGTCGCCGACGCCT31.5706806282722512No Hit
CTCTGAGGATGGTCGTGCGGCCCGTCGCCACGTCGGCTACATCTTTACCA31.5706806282722512No Hit
TTTATCAGCCATTGGTTGAAATCCCCTCGTGCCATCGATGATGTGTCGCA31.5706806282722512No Hit
TGTCCGTAGCGGGGCTTCACCGGGGGGTACCTCGCAACGTTAGACGCTGT31.5706806282722512No Hit
GACGAGCCGATCAAGCCAGTGGAACGAGCCGTCCATCCTGCGCTGGTCGT31.5706806282722512No Hit
GCGGATACCAGCAACGACGTCCTCGCCCTGAGCATTAACGAGGAACTCAC31.5706806282722512No Hit
AGGCAGGAGTGCAGTGGCGTGATCTCTGCTCACTGCAACCTCCGCCTCCC31.5706806282722512No Hit
CTTACGAGGAAGAGTTGGCGAAAGATCCACGTATTGCCGCCACCATGGAA31.5706806282722512No Hit
ACGTCGCACCGATCGCGTTCAACGCTCTTCCGGTGGCGGGAAACTTTGTT21.0471204188481675No Hit
GTTGTCAGCGGTCGGTCACGACCTGCGTCGCCCGCTGGCGGCTGCCACCG21.0471204188481675No Hit
AGAGAATCGCTGTGCAACTGCATGGCGCGACCACCGAGTGGGAGCCGATT21.0471204188481675No Hit
CATCACGGGGAATCACAATGCGGGGTCGCTCCCGCCACATCAATCTGACG21.0471204188481675No Hit
GTCCTTGTGGGCGGTGACGATCCCCGGAATCGGACCGTGGTAGCCCATGC21.0471204188481675No Hit
GGTAAGCACCCCACCCGGGGATGTAAAATTACTGACACAAATAGTCAGCT21.0471204188481675No Hit
CCCTCAAAGTACTTGCCGAAGCGCGACTTCATCTCGCGGTAGAGAATCTC21.0471204188481675No Hit
GTGCACGCAACGGGGTCTGCCCCGGTAGACACCTATCGGGAAAGGAGAGG21.0471204188481675No Hit
ACCAGATCATGGCTGACAACGGCGTCACCGTGCCTACCTGGCGTGAGGCC21.0471204188481675No Hit
GGCATTCTCATGGCGGCGTTTACCGAACGCGGACTAACCCGAAACATCGA21.0471204188481675No Hit
GGATATGGACGGTTCTCGATCGCGTGGACCCTCATGCAGATGCCAGCGTC21.0471204188481675No Hit
GGTGATAACGTCATCGGTCTGGTCGGCACCGCGCCGAACGCCCATGCGTC21.0471204188481675No Hit
CTTCTGGGACGAGCCCTACAAGGCGCCCGTCACCCGCTGGGGCACCGAGC21.0471204188481675No Hit
GTATATAATTACGCCATGCAATAAAATTGCTCATAAATCGTCATGATTAA21.0471204188481675No Hit
ACGGGTTGGTGATCTCGCGATATGGGGAAGCAATGATCCTGAGGGGGATG21.0471204188481675No Hit
GTCATCAACAGCGCCGCGGGGCTGCGCTCCGGCGGGCTGCACGGGGTTGG21.0471204188481675No Hit
TCTCCGAACATCACCCGAAGCAGATGTCTCAACCGATGACAAAGGAGTCG21.0471204188481675No Hit
GATGGCGCCCGGATCGATGGCGTATGGCGCCAGGCCGGCCTGGTGATAGA21.0471204188481675No Hit
CCTCAACGCCGCCACCCGGGAGTTCCACGACCCGCACGCCGGGCTGGCCG21.0471204188481675No Hit
GGTGCATCCTTGCCCTGGCGGGTCTGCTTAGCGATCGCCGACATGCCGCC21.0471204188481675No Hit
AGCCGGAACGACCTCATGAATTCCCGCCTGTCGACATAGCAGGCGGAATC21.0471204188481675No Hit
CAACGGACGTGCAACCCTTACCGTGTCGACGTTCAGGCCAGACACGAAAG21.0471204188481675No Hit
CGTTGGACGTGTCAACAAAGAAAGTGCTTCGGTGACAGAAGATGTGCTTA21.0471204188481675No Hit
GTTGCTGACCGTATCCTCCACATGGTCGGTGATGTGGCGGCTTCATCCGG21.0471204188481675No Hit
CGGTTGGGCCGTACCACCGGCATCCCGTTGGCTGTGGTCACAGGCTCCCC21.0471204188481675No Hit
GTGTTTTTGTGGGTGGTCATCGTGGTGTCTTTGTGGTGGTGTGGGGGTCG21.0471204188481675No Hit
ATATGGCCGAGGGACGGGTTGCGGCGTGGGCTGATGACTGCCGCGATCTC21.0471204188481675No Hit
CCATAACGATGGCCGAGACGATGAAAGCCAGCACAAACGCTGCGACCGTC10.5235602094240838No Hit
CCTCTAGCACTTACTTACACAGTCAATCATTTCCCCACAAGGCAAGATCA10.5235602094240838No Hit
CTCTAGGCTCGTAATGTGATTGCCGACCAGGGTGCGGGCAACCTTGACGC10.5235602094240838No Hit
GAAGGTGACCTCGTCAGTGTGAGAACTGGCCACACGCGCCAGCTTGACCT10.5235602094240838No Hit
GCCCTGCTCGGCCCTGGACCCGATCTCAACCCTAGCCATCGAGGATCTTG10.5235602094240838No Hit
ACGGTGGCGATGGCTACCCACGACGTCGACCTGGCTCTGGCGTGGGCGCA10.5235602094240838No Hit
CTTCTGGTCACATGCGGTGCGGTGATGTATTCGTGTTCCGTTAGGGTTTT10.5235602094240838No Hit
CCCACGGGTAGAGGAACATGATGTCGATGTCGAACACGATGTAGAGCATT10.5235602094240838No Hit
GCCTATGCCCTCAACGCTGGCGCCGTCGTCATCGGTCCCGAGATTTCAGT10.5235602094240838No Hit
GCAGATCTACGAACGTTCCACTCACCCGTATACCCAGGCCCTGCTCTCGG10.5235602094240838No Hit
CAGGAGGAAGGTGCCGGTCACGGCCAAACCATAAGCCGTGGCTAGTTTCG10.5235602094240838No Hit
GGTCAAGGGCCCCTAACCCTGCTGTCGCAGAGGCGTGGCATATGCGGCGG10.5235602094240838No Hit
ACACAGCCGGAAGATGCAGCCCCAGCATCGATGGGGCCCGACCTGAGACG10.5235602094240838No Hit
ATGTCGACGACGCTCTGCCTCCTGACGAGCTCACCGTCGAGGCCGCCAAG10.5235602094240838No Hit
GCACGGCTGTCGTGGCCCCGACTTCCGGACAAGGGTCCGCATTTCAGCCA10.5235602094240838No Hit
GTTCTAGTTTGCCGCGTCGCGGCATGACCCGAGGATAGTGACGTGGGACA10.5235602094240838No Hit
ACCCAGGTGGATGCGCTGTACCCGAGTTCGGCCGAATTGTCGGCTGGTCA10.5235602094240838No Hit
ATCCGGTAGGGCCTGGCGTCCAGCAGCACGTCGGCGCCGTACTCGGCGGC10.5235602094240838No Hit
CCCCATGGTTGTTCACTTCGGTACAGTGGTGACTCACTCTGTGAATCATG10.5235602094240838No Hit
GCCAGAAGGAGAAGCTAGATAAGTACGTCAACCCGCTTATTGCCATCTCG10.5235602094240838No Hit
CCTCCGGCGCAGCGCCGCGACGACCGTGGCGGCGAGTTCGGCCGTGTCGT10.5235602094240838No Hit
GCTGACGACCGCACCCCGATCGTCATTAATCCGGCGGCCTGGAGCCACTA10.5235602094240838No Hit
GCCGTCACCAGCTCAACCGCTGGCCTGACGGGTTGGAAAAGTGTGTGGGT10.5235602094240838No Hit
CATCGGAGTTGTCGGTGGCAATAATGCGCCCGCCCCGGGCCGCGATGGCT10.5235602094240838No Hit
CCCCGTCACCCAGATGATGGGCCTACGCAAGGGCCAGATGATGCACATGG10.5235602094240838No Hit
AGGCTCGATAGCTAGCTTGGGGGATCCGTCAAGATCAGCAACTCGGCGGG10.5235602094240838No Hit
GCCATAGTTCACACCGTGGTGACGCTCGGGAACGAACCCGCAGTGCCACA10.5235602094240838No Hit
GCCGTGATCGGTGTGCAGCGGCGAGGGAGGCAGGGTCTCTTTGGTCGTTG10.5235602094240838No Hit
ATCCCGTCTAGGTAGAGGCCGACTGCGTCCTTACCATCAATGCCATCGGT10.5235602094240838No Hit
CCAGAAGATAGTGTGGGTGGTCGGCGTCAGGGCGTCACGCTGGAACAGTA10.5235602094240838No Hit
ATGTTGGGGTGTTTGGCCTTGACGCAGGGACTCCGGTCGTCAACCGCACC10.5235602094240838No Hit
GTCCGGAACCGTCGCGATCTTCTTGGTGGTCACGCCGTTGCCGAAGTCTT10.5235602094240838No Hit
CTGTGACCACGACGCTTCTGCCACGGGTTGCCCAGCCGGGACCGGGCGTC10.5235602094240838No Hit
GCAAGGAGCGATGCGAACCGTTTCACGGTGGCCTCCATTGTCTTCCTGTG10.5235602094240838No Hit
GTACCCGGCCTCTCGGGTGCGCACCGCATGGAACGTCAGGTGGTCATTGG10.5235602094240838No Hit
CCTCCTTCTTGAGGTAGCGGACGCTGCGCTGGGCGGCGTACTCAGAGCCG10.5235602094240838No Hit
GGGTGACAGCATCCGTGACGCGGTGAACGGTGACCTCCTCGCGCAGAGTG10.5235602094240838No Hit
ATGCATATATCAGGGGTCAAGCACCAACCGGTACCCCATTCCGGCATCAG10.5235602094240838No Hit
TCGTCATATCGCGCGGTCTCCGGCAGCGGTGAGTACAGCGGCGGTCCCTG10.5235602094240838No Hit
CACCAGGACGTCATGGCCTGCCGTCAGACCGGCTTCGCCATGTTGTGCTC10.5235602094240838No Hit
ATCATGGCTTAGGAGGACGCGGTGGCTGTTCGGGGAAGGTCGCGGGTGCT10.5235602094240838No Hit
CGTAGGCCCCGACCGGGTTGCCCGGTAGGGCGAGCACGGGCGTCTCGGCC10.5235602094240838No Hit
GACAATGGGTTTCCACCATGACTTCGGCACCATGAGGATCATGGTCACGG10.5235602094240838No Hit
GTCGACGCCGCGCTCCAGCCAGAAGCGGAGCACGTCGTGCATGGCCGCCC10.5235602094240838No Hit
GGAGTTAATGGCAGATAAAGTGTTGCCAGTGGAAATGCCATTCAGTGCCG10.5235602094240838No Hit
GTCCGAGCGGCATCTCCTCGGCGCCGACCAGAAGCCGCGCATCCTCCCGC10.5235602094240838No Hit
GCTCCGAGCCGATCATGACTGCCCTGCGCGACGAATCGGTCCCCAAAGGG10.5235602094240838No Hit
CGAGGACGCCGTGAGGCCGCAGTCGCGCGCGGCGGTCGACGCCCTGCACG10.5235602094240838No Hit
GACATGACGACCCCCAGGGCAGCGATGATGAGCGGTGGGGCGACCAGGGC10.5235602094240838No Hit
GTTGGAAGACGTCATCGAAGTCGAAGGAGATGTCGCCATGACAGCCACTA10.5235602094240838No Hit
ATTCTTGTCCCGTGGCACGGATCAGACGTGCCGGGCCGTTGTAGCGATGA10.5235602094240838No Hit
CTTTGGGCCTTACGGGAGATGGAGATAGCGTCGTACGGTTAGGCTTCGGT10.5235602094240838No Hit
GTCCTTGGCTTATGGAGATTAACGCCGGGCGAGCTACCCGTGGTGAGGCC10.5235602094240838No Hit
ATCGAGGACGGAGGATATCGCCGCTCGAGTGGGGCGGCAGGTCGAGCTCG10.5235602094240838No Hit
GCTGCGAACTACTGCTCTACATGGACATCATCACCGTCAGAGTGGAGGCC10.5235602094240838No Hit
GGAGGAGCTGGCCTGCGAAAACTTCCAAGAAACCGAGGAAGGAGCCCTGT10.5235602094240838No Hit
CCCTGCTGGGCGGCCGCAACCGTCTGCAAGCCATGATAAACCTCGGCGCC10.5235602094240838No Hit
GCGCTGTGTGGATCACTCCATAACCGGCCTGCTTCAAAGTCGTCACGAAT10.5235602094240838No Hit
CGATCTGGGAACGCAGCGAAGCTGCGTAATTGCCACCGCACTTCGCCTCA10.5235602094240838No Hit
TTCCTGGCGCGTCAGCTCTCCTCTCTCCTCGGCCTCGCGGCGGAGCACAT10.5235602094240838No Hit
GCTGAGACTCGCTGGCCGTTAAGGAACATCCGCGAAGAGTGGTGGGCAGT10.5235602094240838No Hit
AGTCTGTGAACAAGAAGAAGGTCGTCCCCATCAAGACCGTGCATATTGGC10.5235602094240838No Hit
CAGTCCATCACGAGCCATTGCCGTGGTTGCTGGAAGACACGCTCAAACGC10.5235602094240838No Hit
ACAGTAAGCACTCCAAGCCCCGCCCCAAGGCGTCCCCGTCCGAACCACAG10.5235602094240838No Hit
GGCTGATGAAGTCTTCCAGCCATTTGAGTTCCATCGGATTGCCTCTCCCT10.5235602094240838No Hit
ATCTACGGCGGTAACTTGCCGACGACCCCGTGGGGCAAGAACGCAGCAGG10.5235602094240838No Hit
GTGAGAACGCGCTCCGGGGAAAAGACGAGGTGGAAATCTTTGCCTTCACT10.5235602094240838No Hit
GCTTGCTATTGCAAGGAATGAGTCAGCAGGATCGCAGTTTTGCCTCTCGC10.5235602094240838No Hit
GGTTGACGACGTGATCGATCCCGCGGACACCCGTCGCAAGATCACCGCCG10.5235602094240838No Hit
CGTCGGTTGTGGGAGCTTCCAATAGATGAGCCGGGTACTTTTATGTCCCG10.5235602094240838No Hit
CAACCAGGCCAAGGCGGCTGGGCCTTCGACGCCTGAGCTTTCGACCCAGA10.5235602094240838No Hit
GCCTAGGCTTGGACGCCCACGGTCATGGTGTGGGTCGCGGTTTGGAAAAT10.5235602094240838No Hit
GGACCTGGCAACGCACTGAGTGACATGCCCGGCTACCCCCACTGCGGACT10.5235602094240838No Hit
GCCTAGTTTAATAGGTGTTTCCAGAATTAATTCAACATCTGCACAATACT10.5235602094240838No Hit
CCCTCAAGAGTGTCAATGAGAACATCTACTCCTTTCCGCCCCACCTCATC10.5235602094240838No Hit
CCGGCACATCATGAAAAATACGATTAGCAACCGTGACATCAACCCGCGAC10.5235602094240838No Hit
GACCACAGCGAGCAGCCAGTTGCCGAGGGCTTGCCGGCCTCCCCGGGTGC10.5235602094240838No Hit
CTCGGACCCCGTCCGCATTCGGGAAATCCATCCCGAGTCTGAACCCTCGC10.5235602094240838No Hit
TCGTGGTAGTGAATAGCTGTGCCACCTCGTCGTCAGCGAGCAGGCTGGCG10.5235602094240838No Hit
GCTGCCGGGAGTCCGGCGTCGGGTGGTACGGCGGACCCGTGAATCTACCG10.5235602094240838No Hit
GACCGCGAACAGCTCCCGGGACGCCCAAGCGGTGCCGGTTCCGAAGCAGC10.5235602094240838No Hit
CGCGGAATGCGCCAAGGCGCGGGACAACCCGCGCTTGGAGAACGACTTCC10.5235602094240838No Hit
CTATTTCCTTCAGTTCTGCTCTGATTTTAGTTATTTCTTGCCTTCTGCTA10.5235602094240838No Hit
CCCTTTTCCTATTCAGTCCGGGCTAGCCCATCGTCGATGACCCGGCGCAG10.5235602094240838No Hit
GGCCTGCCGGTTGTCAAAAAGACCAAAACTGGTTACAGCACGAGCGCGGA10.5235602094240838No Hit
GGATGCTGACCGTCTTGCTCAGGCTCGGGCAGGGGTCGTCGTGAGGTTCG10.5235602094240838No Hit
GCCTGGCGCAATGGCGTCCTACGGGCGGACTACTTGACGTCACGCTGACG10.5235602094240838No Hit
CTCTATGCGAAGATGTAATGTCTTTAAACCTCTTTGTAAAAGATAACTAT10.5235602094240838No Hit
CTTCGAGCCAGGCCGAATGCTGAGCGGCTGGGAAGGCAAAGATGTGGGCC10.5235602094240838No Hit
TCGCATTGCTGGGCAGTACGCCAAGCCGAGATCTAAGGACACCGAGACCC10.5235602094240838No Hit
TCCATGGGTGGGGCGAGGTGCACGGTCCGCAGACGGCTCTCATCTTTACC10.5235602094240838No Hit
AGCCTGGAGGACAGGATCATGGCCACCTACGCCGAGCTGAAGACCGAAGT10.5235602094240838No Hit
GGACTGGATCGCCCCGTCGGCGCGCCGGCCCGCTACGGGCTGCGACGGCA10.5235602094240838No Hit
CGTGTATTTCCAGGGGCGACTCTGCCATGTCGCCATCTTAGGACTGCCAC10.5235602094240838No Hit
GTGTCCGGTTGCTCTACGTCGCTTTGACCCGCCCTACCCAACGGTTAGCG10.5235602094240838No Hit
TTCCTACGCAGGTGGGTGTTGGTCGCCTCGTTGCGCTCGTAGGTGACCAC10.5235602094240838No Hit
GTCCAGGTCCGCCGGCGTCAGCACCTGCAGCGTCGCCGGGCCGAGGTCGC10.5235602094240838No Hit
GCACATAGGCGACGAGCACTCCCAGCCAGCCAAGCTTGCGAGCCCATTTC10.5235602094240838No Hit
AGTTCAGACCTAGGCTCTGATTTTAGTGGAACGGTAGAAATTATTATTCC10.5235602094240838No Hit
AAAAAAGTGCCTACCTAGCTACTAAAAAGGTGCCTACTTAGCTAGTAAAA10.5235602094240838No Hit
CCTCCGGACTGGCCGAGGGTCTGCACACCTTCCCTGGGATTAACGACGTC10.5235602094240838No Hit
GATAAGGGCCAGCAGATCAGCTGCATAAACCGTCGTCGGCTCCAACAGCT10.5235602094240838No Hit
CCCTTTTCCTATACAGTCCGGGCTAGCCCATCGTAGATGACCCGGCGCAG10.5235602094240838No Hit
TGCCGATCTGGCGATAGGCGGCCGTCTTGCGGCCGGAAAATTGCCAGTCA10.5235602094240838No Hit
GGCGAGGGAATCGCCCTCATGGATGAGGTTGGACGTGCCGCGCTGGGGGA10.5235602094240838No Hit
GGTCAACCCTCGACACTTTGCTGGGGTTGGGCGTCGTGCCGATCGTCAAC10.5235602094240838No Hit
TCGTGGTAGTGAATAGCTGTGCCACCTCGTCGTCAGCGCGCAGGCTGGCG10.5235602094240838No Hit
GGTTGACAGTTTAACTTTCTGTCTTGCGAGTTGGGTCGATTGGATGTGTC10.5235602094240838No Hit
GTCCCGGCACGGACCCGGCCTCGTACGACCGCCTGGTCGGCTCCCAGCCT10.5235602094240838No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)