FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003629917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003629917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29
Sequences flagged as poor quality0
Sequence length100
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAAGAACTAGTGCATTGCCAAGGCTGTTTGTTTTTGGGTCCTCAAGGG26.896551724137931No Hit
CACCTTCCCCTGCGCGGCGCTGGCCGACGCAGACACCGGCCGCATTGCCG26.896551724137931No Hit
CTCCCCGATGGGGTCGATCGACGCACCGTTCAACCCGTTGGCAGTGGCGT26.896551724137931No Hit
TCCAAGTTCCGCATGGAAAGCGAACACGAGAAAATCAGCAAGTCCAAGCT26.896551724137931No Hit
GGCTCAGATTCAGTCCGGACAGATCGTATCCGGAGAAGTCAGCCTGTTCG26.896551724137931No Hit
GGCAGGCGGTAAACTATGAGTCCAAGCCATCAGGGCCGGGTTGAACTCAC26.896551724137931No Hit
GGATCTTACTGGGGCAATGAAAATATTCTGAAACCAGATGATGGAGATGG13.4482758620689653No Hit
CTGTTAAAAAGTGAACTGTACATCACTTTAAAGTCTACCAAAACAAAGAT13.4482758620689653No Hit
ACTGTGATGAGGCAGAGCCCACCAACAGCAGGGATGGGGAGGGGCCTTTG13.4482758620689653No Hit
TTAATAACTGCTGTGGAAAAATTGTGTCAAGTATGCATTTTCATATCAGC13.4482758620689653No Hit
CTAATGGAATGGAATGGAATAATCCATGGACTCGAATGCAATCATCATCG13.4482758620689653No Hit
TGGCATGGCAAGTACTTTACTAAATGTAAATACTCAGCGTGCTGGCTGCC13.4482758620689653No Hit
GCCTATTGGGCAAACGGGAAAAACCAGCCGGAAACGGAATACAACCTGTT13.4482758620689653No Hit
GTCCAGGTGTTGGGAGATGAAGCTGGTCAAGAGGTAGATTTTCAGGATAA13.4482758620689653No Hit
CCGCCTACAAGGACGACGCCAGCCAAGAGCCACGCACCAACTGCGCCATG13.4482758620689653No Hit
CTCGTTGCACTTGGCGAGGGAATTGTAAGCCTCGATGCAGTCGGAGCCGG13.4482758620689653No Hit
CCGTTGCGCATCCCGTAGACGGTCTCTGCGCCGCGGTTCTTGCAGCTTTC13.4482758620689653No Hit
GGGTTTCTGGCTGGTTGTCTGAAGGCTGCTTCCAGTTCTTTCCCATGTGG13.4482758620689653No Hit
AGATGGCATGGGCTGGACCTGGCTCTGCCATGTGTGATCTTGAGCTGTCT13.4482758620689653No Hit
CTGTAGAGCGAATCTTTAAAATAGCAGGGAAAATGTAAAGGTAGGAAATA13.4482758620689653No Hit
GACCCCGACACCACCCGCTCCATCCTGGGGCTGATCCGCGAGATCAACCA13.4482758620689653No Hit
GTCTCTGTTCATCAAAGCCGTCATGCGGATGGTCTCCAGAGTGCCGTAAA13.4482758620689653No Hit
CCCACGGCGTCGGCAGACGCTGCAAATACAGATCCGAACCCGGTCCTGCC13.4482758620689653No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)